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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g045230.2.1
CDS Infomation

SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related (AHRD V3.3 *** A0A061F5A3_THECC)
Sequence

ATGAAGTTTGGAGAAACTTTCATGGAGTATTTACAGGCGGAAGAAGGTTTGGATAAATTT
AGTCCGCATGTTGAATACAAAAGGTTGAAGAAAGTTTTGAAGAGTTGTAGGGCTTGTAGG
GCTGCTTTGAAGGAATCCAATTCCAATGGAGGACAACAGGAGGATCATGAAAATGAAGGT
TCTGAGATTTGTCGGCTTGAATCTTGCCAATTGTGTGATCAAAACTTCTTCGCTGAGTTG
AAAAAGGAGGCTTCTGATATAGCTGGTTGCTTCAGTTCTAGAGTGAGAAGACTTCTCCAA
CTTCATACTGCTCCAGGAATACAAAAGTACCTGGTAACGTTGCGTCAATGTTTCAAGAAT
GATCAGCAGGCCATGATGCAAGAGTGCCAAATACTAATTGAATATGCCATGATGAATGCT
ATTGCTATGCAAAAGATTCTTAAGAAATATGATAAAGTTCACTGCTCCGTGACTGGAAGG
AACTTTAAGTCAAAGATGCGTTCTGAACGCCTTGAGATTCTACAATCACCATGGTTGATA
GAACTAGGTGCTTTGTATATGAATTTCAATGAATCGAATGGTGGGAAGTCTAATGTGATT
TTCAGCCAATTTTCTTGCAATCTCAGTGATACAGGGTCTATTATGACTTTGAAGGTTCCA
GATTCTGTGAAATTAGAGTATGATCTGACTTGTCCAATCTGCTTGGATACTGTCTTCAAT
CCATATGCTTTAAGCTGTGGGCATCTTTTCTGCAAATCTTGTGCTTGCACTGCAGCTTCT
GTGATGATATTCCAAGGTATTAGGGCTGCAAGTAACCTATCAAAATGTCCAGTTTGCAGA
GAGGTTGGAACTTATGCTAATGCAGTGCATATGCTGGAACTAGATTTGCTTCAGAAGAAG
AGATTTAAGCAGTATTGGAAGGAAAGACATGCTTCCGAACGAGCTGAAATGGTGAAACAA
TCAAAAATCTTCTGGGATAACCAAACAAGATATGCTGTCGGTTTTTAG

Peptide Sequence

PEP ID

Solyc11g045230.2.1
PEP Infomation

SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related (AHRD V3.3 *** A0A061F5A3_THECC)
Sequence

MKFGETFMEYLQAEEGLDKFSPHVEYKRLKKVLKSCRACRAALKESNSNGGQQEDHENEG
SEICRLESCQLCDQNFFAELKKEASDIAGCFSSRVRRLLQLHTAPGIQKYLVTLRQCFKN
DQQAMMQECQILIEYAMMNAIAMQKILKKYDKVHCSVTGRNFKSKMRSERLEILQSPWLI
ELGALYMNFNESNGGKSNVIFSQFSCNLSDTGSIMTLKVPDSVKLEYDLTCPICLDTVFN
PYALSCGHLFCKSCACTAASVMIFQGIRAASNLSKCPVCREVGTYANAVHMLELDLLQKK
RFKQYWKERHASERAEMVKQSKIFWDNQTRYAVGF*

Transcript Sequence

Transcript ID

Solyc11g045230.2.1
Transcript Infomation

SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related (AHRD V3.3 *** A0A061F5A3_THECC)
Sequence

TTATTATAAAATATAAATCATCAAAATATTAAGAAAAAAAGTATTTAATAGCAAAAGTAA
AGACACAATTTATTCATTATTTTTGTAAGCTAGATAAGTATGATTAGATATCCCAAAATA
TTATAATGAATAAATAAAAATAGATCAAAATAATAATGCAACTTTATTTTTTTTTATATA
TCAAAAAGCAATTGTAACGGAAATTCTTTGAGTCAAAATCATTTAATTAGTGTTTAATAA
TTCCATAAACATTTTGGTTTAGTACTATATTTATCATTATTACTTAATATAGAAGCTAAA
TTATAGTTCTATTTTTCTTAAATTAATATAATAAAAATAAATAAATGTGGACTTTTTTTT
TTAATTCCATATTTGGCTCCTTGCACAAGTTGATATATTAATGACACGTTCATGACATGC
AACAAACTATTTCTTGGTTTCTCTACAAAAACATTAATATAAAAACCTAAATAATTTATG
AACATATCAAAATTCGTAACCGAAGAAAAGATTATTTCTCAGGTTAACATTTTACATAAC
CCGCCCAAAATTTATAAACAAAAAAAAAGAAAAAAAATTAATTTCTATTACGATTTTTGA
TTTGTGTGAAAAAATATTTATTATAATTGGGTTGGGTTTTTTTTTTTTTTTTGAGAAGAA
GGAAATTTTTTGTAATCATGAAGTTTGGAGAAACTTTCATGGAGTATTTACAGGCGGAAG
AAGGTTTGGATAAATTTAGTCCGCATGTTGAATACAAAAGGTTGAAGAAAGTTTTGAAGA
GTTGTAGGGCTTGTAGGGCTGCTTTGAAGGAATCCAATTCCAATGGAGGACAACAGGAGG
ATCATGAAAATGAAGGTTCTGAGATTTGTCGGCTTGAATCTTGCCAATTGTGTGATCAAA
ACTTCTTCGCTGAGTTGAAAAAGGAGGCTTCTGATATAGCTGGTTGCTTCAGTTCTAGAG
TGAGAAGACTTCTCCAACTTCATACTGCTCCAGGAATACAAAAGTACCTGGTAACGTTGC
GTCAATGTTTCAAGAATGATCAGCAGGCCATGATGCAAGAGTGCCAAATACTAATTGAAT
ATGCCATGATGAATGCTATTGCTATGCAAAAGATTCTTAAGAAATATGATAAAGTTCACT
GCTCCGTGACTGGAAGGAACTTTAAGTCAAAGATGCGTTCTGAACGCCTTGAGATTCTAC
AATCACCATGGTTGATAGAACTAGGTGCTTTGTATATGAATTTCAATGAATCGAATGGTG
GGAAGTCTAATGTGATTTTCAGCCAATTTTCTTGCAATCTCAGTGATACAGGGTCTATTA
TGACTTTGAAGGTTCCAGATTCTGTGAAATTAGAGTATGATCTGACTTGTCCAATCTGCT
TGGATACTGTCTTCAATCCATATGCTTTAAGCTGTGGGCATCTTTTCTGCAAATCTTGTG
CTTGCACTGCAGCTTCTGTGATGATATTCCAAGGTATTAGGGCTGCAAGTAACCTATCAA
AATGTCCAGTTTGCAGAGAGGTTGGAACTTATGCTAATGCAGTGCATATGCTGGAACTAG
ATTTGCTTCAGAAGAAGAGATTTAAGCAGTATTGGAAGGAAAGACATGCTTCCGAACGAG
CTGAAATGGTGAAACAATCAAAAATCTTCTGGGATAACCAAACAAGATATGCTGTCGGTT
TTTAGATACTGTCTTGGTGCAACAGCGTGATGGAGCGATCTATTTCCTCCGAGCTCCGAT
TTTTTTCACATTCATCAGCCGAATATCATCAGCTGGTGTTTTTGTCTAATTTAGAACATT
GTTTCTTGATACTAATAGCTTCCTGATTCTTAGACTATTGGAGTTTGCCAAAGTTGCTAA
GTCACATATTGTGACTTTGGTTTCTTTTCTTGCAAATTTTCTCAAAGACTCATTTATCAG
ATTTCAAAGTGGCAATTTTTTGGCTTGAATTACTGATATC