Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g045100.2.1
CDS Infomation

tropomyosin (AHRD V3.3 *** AT1G33500.3)
Sequence

ATGGAAGAGTATTTTCAGTGGATGAAGACTCTTCGCACTCAAATGAGTGATGTAGAGGAT
GAAGCAGTTAAGATAACAGCCGAGGAGCAAATGCAAATAACTACACTACAAAATCTCGAA
AATGAAATTAACTCAGTGAAATGTCAGACAAGCCAACTCGGAGAGGAAATTGCCAGGATA
CTGGAGAAAAAAGGGCAGATCTGTTCCATGATTTTGGAAAAACAAAGAAAAATTGCTTCT
TTAGGAGCTGATTCTTCCACCCTCAACCAGACATCGGAGCTCCTTCAACAAGAAAGAAAC
AACATGTCAGCAAAACTTCTACAGAAAAGTGACTATTATGCTAAAACTGTTGAAGAAGTA
ACTGCTCAGCTAGGAGAACAGCAGGGTTGGATCAAAGATTGCAAACAGAACTTGTGGGTT
GGAGATAATGGCCAGGTGATGGACAAAGTTAGTGAGAAAACTGGTGAAATTGAAGAAAAT
CAGGATAAGTTGGTAGAAATTCTAAACGCTAAAACAAAGCTAAACCAGATGAGTGAGCTG
AAGTCCAAACTTGTCACAGAGAACAGCCAGGTAAGGAGATCTATTGAGCTTGTGAAGTCA
AAAACGAATGATTTCAAGGCACAACTCGGGGATATGGATAGCAAATCCTTGCAAGAGGAG
TACCAAGCACTTCTCTCAGACAAAGCTGGAGAGGCAGAGTATCTGCACTCTTTACAACTC
CAGATTGCAAAACTGATGATAATTTCCCACAGTATCAAATGTTCTTGTGGAAATGAGTTC
AAGATAGACATGAATCTTTGTGGATGA

Peptide Sequence

PEP ID

Solyc11g045100.2.1
PEP Infomation

tropomyosin (AHRD V3.3 *** AT1G33500.3)
Sequence

MEEYFQWMKTLRTQMSDVEDEAVKITAEEQMQITTLQNLENEINSVKCQTSQLGEEIARI
LEKKGQICSMILEKQRKIASLGADSSTLNQTSELLQQERNNMSAKLLQKSDYYAKTVEEV
TAQLGEQQGWIKDCKQNLWVGDNGQVMDKVSEKTGEIEENQDKLVEILNAKTKLNQMSEL
KSKLVTENSQVRRSIELVKSKTNDFKAQLGDMDSKSLQEEYQALLSDKAGEAEYLHSLQL
QIAKLMIISHSIKCSCGNEFKIDMNLCG*

Transcript Sequence

Transcript ID

Solyc11g045100.2.1
Transcript Infomation

tropomyosin (AHRD V3.3 *** AT1G33500.3)
Sequence

TTTGAATCTGCGGCTCATAGCTCTGCGAATTGAGGTTTCTGCAAAAATGGAAGAGTATTT
TCAGTGGATGAAGACTCTTCGCACTCAAATGAGTGATGTAGAGGATGAAGCAGTTAAGAT
AACAGCCGAGGAGCAAATGCAAATAACTACACTACAAAATCTCGAAAATGAAATTAACTC
AGTGAAATGTCAGACAAGCCAACTCGGAGAGGAAATTGCCAGGATACTGGAGAAAAAAGG
GCAGATCTGTTCCATGATTTTGGAAAAACAAAGAAAAATTGCTTCTTTAGGAGCTGATTC
TTCCACCCTCAACCAGACATCGGAGCTCCTTCAACAAGAAAGAAACAACATGTCAGCAAA
ACTTCTACAGAAAAGTGACTATTATGCTAAAACTGTTGAAGAAGTAACTGCTCAGCTAGG
AGAACAGCAGGGTTGGATCAAAGATTGCAAACAGAACTTGTGGGTTGGAGATAATGGCCA
GGTGATGGACAAAGTTAGTGAGAAAACTGGTGAAATTGAAGAAAATCAGGATAAGTTGGT
AGAAATTCTAAACGCTAAAACAAAGCTAAACCAGATGAGTGAGCTGAAGTCCAAACTTGT
CACAGAGAACAGCCAGGTAAGGAGATCTATTGAGCTTGTGAAGTCAAAAACGAATGATTT
CAAGGCACAACTCGGGGATATGGATAGCAAATCCTTGCAAGAGGAGTACCAAGCACTTCT
CTCAGACAAAGCTGGAGAGGCAGAGTATCTGCACTCTTTACAACTCCAGATTGCAAAACT
GATGATAATTTCCCACAGTATCAAATGTTCTTGTGGAAATGAGTTCAAGATAGACATGAA
TCTTTGTGGATGAAAATGACCAGGGCCAGGCAAGTACTTCAACTAGCAAGTGGTGGAGTG
TCTTCATTACTAGTTAGGTATGTATGCAAATAATGGTCGAGATAGTTTGAGATAAATGGG
GAGCTGTTGCAGTTGTTGAGATGGCATAAGAATATGGTTTGTACTTTGTTGCTGTAGCAT
CTATATTCTATGTAAAAGACAATTTTAAATGCTAGTAGAGTTCTGCTTGAATGAATAACA
TACGCACAACTGAACTTAAGCTGAGCCTTTCTCGTATTGAAAATTGGACATTTCATTACA
TGTGTGCTAAGTCTATGATGTATTAGAAAACAAAGTATAGAGAACTATAGAGCTTTGTCA
TCTATCATTTCAGCTCAGATTACTACATTTATGGAGGTGTGCATTTGGTTCAACACATTC
AAGCAGTGTAGACTACATGAGATAAATTGGACGACGATTGTGCTTTCTGTAGTATATAGT
ACACTAAAAGTGAAGATCATCAAAATGCAGTCCTCTAATAGATATCAGATAAAACTAGAT
ATTATATATGTTCAGTGTGTTTTCAACTCTTGTTATATTTTTACAAAGTATAAGATTGAA
ACCCAGACTTTTACTCGCGTGCTTACTTTTTTGACTGAAGTTTTGCCTGTGACATTGCAA
AGGAAATAGTCAAATATCGTAAACTTTACATGACACCTAGCTTCTCCAAGGCCGCAGAGA
TATCCTGGGGTTCATATCCTTCAGCTGCACATATGTTTGTGCTCTCTGGAGGCACTATTT
CATCTGTCTTGAAGCTATCTTCATTGTGAAGAAGCTTCTCGCTGGCATATTCCACACTTC
GTTTCAGAATCACAGTCTTGTGAAGGCCCACAAGCAGGCTTTCATAGTCTGTATCTCCCT
TCCCCCCCACAAAAACAACCATACTGGAAAGATCAACTCCCCATCTAACTGAGAGATACC
TGCATTACATGCAGAGAAGGACTGACTGTGACAAAGTTTGTGTAGAATTGATCTTTCCTA
GTATCTGCTAACCGAAGCACAGAAGTATCATTAGACCATATATTAGTAAAGGATTGAAAT
GGTTTACCTAAGTGCTTGGGATCTCGATGCAAATAATGGTGTCACGTTCAACCTTGATGC
AGCATGTGTGTAGACAACATTGCAACGGAAGCCTCTCATGCGGAGCCTCTGACGAAGGTC
ATTAACTTTCCTTACCTGTCACATGTAATTTATTATCAGGATACAAATGGGAAAACCAAT
TTGTATGTTTCTATTTGTATTGTCTAACTTAGAACATCAAGAGTGGCTTAGCAATCTTAC
TTCGGCTCCTGGCTTGATGCTATATGAGTAGCATTGAAAGCTAGATGCACTTGGGCATTG
TGCAATGTCATGCTCAGAACCTTCTTCAATTTTACCAAGCCTCATCACTGCTGATTTAAT
GTTCTCACCTGGCCACCGATACTCAATGTGGGCTTCATAGTCGTCATCTAGTCCTAAGTC
CTTCCATGGGTAGTATATTTCACTTCCACTGCTGCAAATCAATGCATCAAAATCTTCTAA
ATTTGTTGGGCAGCTGTTTACAACTTCTTTAGTCTCTTGCAGACACAAGCCTGTCAGAAA
AAGTAATCCTATTTGGCTGGACCTGGATCTTGCAACTTGCATTATATTCTTGACCGTTAG
AGATAAGGTCTCAGTTGGAGATCCATTGCTGTTGTAACAGTCAGTTGCCACTACATATAG
GACCTTCCTTCTCCCAGGAGAGTAGCTAACAATAGGCTTGTTGATTGAATTAGCTTTCCG
TGAGAGTATCTCAACAAGTTCATGCTGCCTTCTTGCCATATCCATCTCTCCATTGGCCTT
GAAATCCACATCGATGGAAAATTTTAGAGAAAGGTCTTCAACATCTCTTAGTGATTCACT
CATAGGTTCTTCAGGAGCTGGCTTCATGACCTCAAGACAATTAGCAGGGTGGCGATTTCT
GCAGTGTTGAACATGGGAGAGGTAATTCCGGCAGTGCTCTGGCCATGAGAAGCAGTGGAT
ATTCTTTAGGCCATTCTTACGGCACTCTAACCATAGGTTCTTGTCAGCAACAAGCTTTAG
AAGAGCATCTTCTATTGCTTTTTGATCATGTGGATCAATGAGTAGCCCATTGTGTAGTGC
CTGATTAAACATTATGTTCCACATTATATTCATCCATAAGTTACAGTAACTCACTACTTT
GAGGTGTACATGTAATTAAAAAGATAACTATTTGAGAAAAGACGGGGAAGTTTGCAAAAG
AAAACTTGGGGCATCACTTTTTGAAGTTCCTAAAAGTCATGTTCTGCAT