Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g044800.2.1
CDS Infomation

Protein trpH (AHRD V3.3 *** A0A151T262_CAJCA)
Sequence

ATGGGTGACAAAGAAATCCCCAAAAAACAAGGTGCGAATGGGTCGAAGAACAAGAAAAAG
AAGAAGAGAGGTGGTTCAAAGAAGAGAATGACATCTGAACAGACTTCGGCATACAATTCT
GTGAGTGAATGGGTTTTCTTGGACCGCACTCATTCACCCACTGCTGACGATTTTGCTATT
CCCTGGAATCAACCCAAAGAGAAGTTAGTCTTTGAATTGCATTCTCATTCTATTCATAGT
GATGGCTTTTTATCACCTTCCAAGCTCGTCGAAAGAGCCCATCAAAATGGGGTGAAGGTT
CTTTCATTGACAGATCATGATACTCTATCTGGCATCCCCGAAGCACTGGAAGCAGCTAGT
AGATTTGGCATTAAAATTATTCCCGGAGTTGAAATCAGTACAATGTTCACCCAAGGGAGG
GACTCTGCATTAGATGAACCAGTGCACATTCTTGCATACTACAGCAGTTGTGGACCAGCA
AAATTTGATCAAGTGGACAAGTTCCTGAGTAGTATAAGGGATGGGCGTTTCCTCCGTGCG
GAGAACATGATCTTAAAACTTAATAAATTGAAGTTGCCACTTAAGTGGGAGCAGGTAGCA
AAAATTGCAGGAAAGGGAGTTGCTCCAGGGAGGCTGCATGTTGCCCGTGCTATGGTTGAA
GCTGGCCATGTGGAGAATCTAAGACAGGCTTTTTCCCGATATCTTTATGACGGGGGACCT
GCTTATGCTACGGGAAGTGAGCCACTTACAGAGGAGGCTGTTCAATTTATATGTGAGACA
GGAGGTGTAGCAGTTTTGGCTCATCCATGGGCATTAAAAGATCCAATTGCTGTTGTTAGA
AGATTGAAAGAATTCGGGCTACATGGTATAGAGGCCTACAGGAGTGATGGAAAATTAGCA
GCATACAGTGACCTAGCAGATTCTTATGGTCTGCTGAAGCTTGGAGGTTCAGATTTCCAT
GGAAGAGGAGGGAAGCAGGAGTCTGAGATCGGAAGTGTGAGCCTTCCAATGTTAGCCGTG
CATGAATTTCTAAAAGTGGCCCGCCCTATCTGGGGCAGAGCAATTAGTGAAATTCTGGAG
AACTACATAAAATATCCGTCTGAAACGAACTTTCAACTTATTATGAGTTTTGGAAAGCCT
AAAGTCTGCAGGGGCATTTCTCCAGCAAGCTGTCCTGGTGATTTTATGAGACAATGTTTG
TCACTGTGGTTGACAAACGAGGAGACGCAGAATGTGGAATTTGAAGCCATCAAACTGAAG
CTTGCAGCCATATCTACCAATCAATGA

Peptide Sequence

PEP ID

Solyc11g044800.2.1
PEP Infomation

Protein trpH (AHRD V3.3 *** A0A151T262_CAJCA)
Sequence

MGDKEIPKKQGANGSKNKKKKKRGGSKKRMTSEQTSAYNSVSEWVFLDRTHSPTADDFAI
PWNQPKEKLVFELHSHSIHSDGFLSPSKLVERAHQNGVKVLSLTDHDTLSGIPEALEAAS
RFGIKIIPGVEISTMFTQGRDSALDEPVHILAYYSSCGPAKFDQVDKFLSSIRDGRFLRA
ENMILKLNKLKLPLKWEQVAKIAGKGVAPGRLHVARAMVEAGHVENLRQAFSRYLYDGGP
AYATGSEPLTEEAVQFICETGGVAVLAHPWALKDPIAVVRRLKEFGLHGIEAYRSDGKLA
AYSDLADSYGLLKLGGSDFHGRGGKQESEIGSVSLPMLAVHEFLKVARPIWGRAISEILE
NYIKYPSETNFQLIMSFGKPKVCRGISPASCPGDFMRQCLSLWLTNEETQNVEFEAIKLK
LAAISTNQ*

Transcript Sequence

Transcript ID

Solyc11g044800.2.1
Transcript Infomation

Protein trpH (AHRD V3.3 *** A0A151T262_CAJCA)
Sequence

CCCTTAGTTTTCTCAAGTTATTGCACCATTTCCAATAATAGTAGAAAATATGTTTTAACC
AAAAAAGATAAAAAGGAAAAGGAAAAAAAAGTTGAAGTTGAAGCAGCCGACGACCCCATT
TATACTCCGTGTGGAAAGCTTCAGTTGTTGAATTGGTAGAGAATTGTATTATGGGTGACA
AAGAAATCCCCAAAAAACAAGGTGCGAATGGGTCGAAGAACAAGAAAAAGAAGAAGAGAG
GTGGTTCAAAGAAGAGAATGACATCTGAACAGACTTCGGCATACAATTCTGTGAGTGAAT
GGGTTTTCTTGGACCGCACTCATTCACCCACTGCTGACGATTTTGCTATTCCCTGGAATC
AACCCAAAGAGAAGTTAGTCTTTGAATTGCATTCTCATTCTATTCATAGTGATGGCTTTT
TATCACCTTCCAAGCTCGTCGAAAGAGCCCATCAAAATGGGGTGAAGGTTCTTTCATTGA
CAGATCATGATACTCTATCTGGCATCCCCGAAGCACTGGAAGCAGCTAGTAGATTTGGCA
TTAAAATTATTCCCGGAGTTGAAATCAGTACAATGTTCACCCAAGGGAGGGACTCTGCAT
TAGATGAACCAGTGCACATTCTTGCATACTACAGCAGTTGTGGACCAGCAAAATTTGATC
AAGTGGACAAGTTCCTGAGTAGTATAAGGGATGGGCGTTTCCTCCGTGCGGAGAACATGA
TCTTAAAACTTAATAAATTGAAGTTGCCACTTAAGTGGGAGCAGGTAGCAAAAATTGCAG
GAAAGGGAGTTGCTCCAGGGAGGCTGCATGTTGCCCGTGCTATGGTTGAAGCTGGCCATG
TGGAGAATCTAAGACAGGCTTTTTCCCGATATCTTTATGACGGGGGACCTGCTTATGCTA
CGGGAAGTGAGCCACTTACAGAGGAGGCTGTTCAATTTATATGTGAGACAGGAGGTGTAG
CAGTTTTGGCTCATCCATGGGCATTAAAAGATCCAATTGCTGTTGTTAGAAGATTGAAAG
AATTCGGGCTACATGGTATAGAGGCCTACAGGAGTGATGGAAAATTAGCAGCATACAGTG
ACCTAGCAGATTCTTATGGTCTGCTGAAGCTTGGAGGTTCAGATTTCCATGGAAGAGGAG
GGAAGCAGGAGTCTGAGATCGGAAGTGTGAGCCTTCCAATGTTAGCCGTGCATGAATTTC
TAAAAGTGGCCCGCCCTATCTGGGGCAGAGCAATTAGTGAAATTCTGGAGAACTACATAA
AATATCCGTCTGAAACGAACTTTCAACTTATTATGAGTTTTGGAAAGCCTAAAGTCTGCA
GGGGCATTTCTCCAGCAAGCTGTCCTGGTGATTTTATGAGACAATGTTTGTCACTGTGGT
TGACAAACGAGGAGACGCAGAATGTGGAATTTGAAGCCATCAAACTGAAGCTTGCAGCCA
TATCTACCAATCAATGATTAGGTTCTGCAGCGCGCGCTGCAATGGGGATATTCTTTTGCC
ATTAGTTTTGGGACACACCATAGCTTCACATATCTATGTTATTATAATTGTGGTCACAGA
AGAGAGGTCGTACATCTCTTGGCTTTTTATCGTTTCTCATTTTTTGGCCTTTTCTTTATT
TTTTGTTTGATTTTGTTTTCGTTTAACTTGTTAAAATATCTAAAACGGCCTAATAATTAA
TCATTTAAATGGAGAAGACATTTGACAAAATGAAGATAAAACTTCAATTTCCAACACTCT
GTACGTTTTCTATAAATCATACCTTTCCAATTTTTGTAAACCTTACCATTTTTCTTACTT
GAAGAAGAAAAAGGTAGTCTTGCCTACTTATAATAAGTGCATTGTGTCAAATAGGGCTGG
ATATAATCTGGTTCAAAATAGAAACAAA