Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g044740.2.1
CDS Infomation

Pollen specific LIM domain protein 1a (AHRD V3.3 *** Q9SNX4_TOBAC)
Sequence

ATGACATTTGCTGGAACAACACAAAAGTGTAATGCTTGTGATAAAACGGTATATCTAGTT
GATCGTCTTGCTGCTGATAATCGCGTTTATCACAAAGCTTGTTTCAGGTGTTACCATTGT
AAAAGTACTCTCAAGCTCAGCAATTTCAATTCCTTTGATGGAGTAATATACTGCAGGCCT
CATTTTGATCAGCTTTTTAAGAGAACTGGCAGTTTGGATAAGAGTTTTGAAGGTACTCCA
AAGATCACAAAGCCAGAAAAAACTGTGGATAACGAGAACGGTACTAGCAACAAAGTCTCA
AGTTTATTCGCAGGCACAAGAGAAAAATGTGTGTGCTGCACTAAAACTGTGTATCCCATT
GAGAAGGTTACTGTGAATGGAGCAGCATACCACAAGGCATGCTTCAAATGCAGTCATGGA
GGTTGTACTATAAGTCCATCAAACTACATTGCACATGAAGGAACACTTTATTGCAAGCAT
CATCACATTCAACTCTTCAAAGAGAAAGGAAATTACAGTCAACTTGAGATTGATCATGAA
ATAGAACCTGCACTTCCTCCACAAATTGCCATGGAATCGTAA

Peptide Sequence

PEP ID

Solyc11g044740.2.1
PEP Infomation

Pollen specific LIM domain protein 1a (AHRD V3.3 *** Q9SNX4_TOBAC)
Sequence

MTFAGTTQKCNACDKTVYLVDRLAADNRVYHKACFRCYHCKSTLKLSNFNSFDGVIYCRP
HFDQLFKRTGSLDKSFEGTPKITKPEKTVDNENGTSNKVSSLFAGTREKCVCCTKTVYPI
EKVTVNGAAYHKACFKCSHGGCTISPSNYIAHEGTLYCKHHHIQLFKEKGNYSQLEIDHE
IEPALPPQIAMES*

Transcript Sequence

Transcript ID

Solyc11g044740.2.1
Transcript Infomation

Pollen specific LIM domain protein 1a (AHRD V3.3 *** Q9SNX4_TOBAC)
Sequence

GGGGGAAAAAATTGATTTCATCCTCCGATATCTGTTCTCTGTCTTTTAACTCTTTTTCGT
TACACACAATAAGATGACATTTGCTGGAACAACACAAAAGTGTAATGCTTGTGATAAAAC
GGTATATCTAGTTGATCGTCTTGCTGCTGATAATCGCGTTTATCACAAAGCTTGTTTCAG
GTGTTACCATTGTAAAAGTACTCTCAAGCTCAGCAATTTCAATTCCTTTGATGGAGTAAT
ATACTGCAGGCCTCATTTTGATCAGCTTTTTAAGAGAACTGGCAGTTTGGATAAGAGTTT
TGAAGGTACTCCAAAGATCACAAAGCCAGAAAAAACTGTGGATAACGAGAACGGTACTAG
CAACAAAGTCTCAAGTTTATTCGCAGGCACAAGAGAAAAATGTGTGTGCTGCACTAAAAC
TGTGTATCCCATTGAGAAGGTTACTGTGAATGGAGCAGCATACCACAAGGCATGCTTCAA
ATGCAGTCATGGAGGTTGTACTATAAGTCCATCAAACTACATTGCACATGAAGGAACACT
TTATTGCAAGCATCATCACATTCAACTCTTCAAAGAGAAAGGAAATTACAGTCAACTTGA
GATTGATCATGAAATAGAACCTGCACTTCCTCCACAAATTGCCATGGAATCGTAAACTCA
TTTATGTTCATCACCTCCATCTCTTTCACTTCTCCTCTCCCTCATCCTTTGCTACGTCAA
CCTTAGCTTCATCTCCATCATCTTTCATTTTTATGGAGTATATTTTTATCCACTTTGGTT
GTATGAATTCTAATGGATTTTTGTAAATTGTAAAATATAGATGGTGTTTATAAATATTCT
ACCACAACATTGTAAAGAGAGTAATTATATTCTTCATTTATTTGAATTTTTTTAGGATCA
AAGAAGGGTTAATTTTTTTCCTTGTAAGAATTATAACCACCAACCCACACTGCAATATTG
TCATCCCAATCCATCAGTAGAAGCATGAATATATGGCACAATTCATTAAAAGATCTTTGT
AATCCCACAGAGAATAGAAAACCAAAATAACTTAAGAGATTACTTGCTCCATTTTAACAG
AAAATAATTGATTGATCAACACTACATAACATATACTCTCTGAAGCTTCAACTATGAAAA
TACATTTTGAAGTTTAGAGCAGTACGACATAATCAACCAGCAATGCAGGAGAACTAGATA
GCTTCGAAGTTTACATTGCACCTGGAAAAAAATTTAACTAGGCAAGCAAAGTTCCTTTCA
CAGCCAAAAGAGCACATAGCTCATGTTAGAATGAGACTACTACACAATAAACACAAATTT
TCATCTATCCCACTCCGCCTCCATTAGTTGTGGAACCACCTTTGAGGGACTTTGAGAGAT
GCTTTCTGAAGGCCGATTAGTGAAGCGATCCCATCCCATGATGTGAGGCAAACAAATTCG
GCAGTAGTGACAGGAACAGTAAACCGATCATTGGTTTTGAGATTATTGTTAACAACACCT
GCATAAAGGACAAAAGCAAATGCAGCAATTAGTATGATCACTAATACATGGCTTGTCAAA
TTACAAAAGAAACACACCCAGAAGCCACACAGGAACAGGATGAAGCATATATATCATTGT
TTTAACATATCAAGAAAATGGTTACGTATAAGCATATCATTGATCCTTAACATGGACAGC
TACCATTACAGAACAAATTGTGATGCATCTTGTGGGTTGGAAGCAAAATTTTAAAAAAGG
TGAACATATAGACTGATACTTACTCAATGAAACGAAATAACCACTCCCATCAGCATTTGG
CTTAATTGACAAACTCTTTCTAACTTGACCAGCATTACTACAGCATTGAAGGATCATGAA
AGAATTCAGAAGAATCTCTGGTCCCCATACTTATCAATGATCCAACCTCTGTTGCTGATA
AAGCAAACAACTGCAATATGTTGAGTCATCTGTCAGTCAAATCGTACATCAGATATGTGA
ACATGTGCAAGAAAAGAAAGAGCAAGAGAGAGTGGTGAAACTAACATAGAGATGGATATT
TATTTAACATCCAAATGGACACTTAAAAGAGAAAAATACTAATAACTCTAAAGAAAAACC
AAGCAGCAAAATAACATAAACAAGAAATATACAAGCAATTTCTTCACCTAGTTATGAAAG
ACCACCTCTTAAGCATATTATAAACCTATAAGTTGGTGGCTCATGCTATGACCAAGTACT
AAGCATCCAAACATGAACAATCAATCCTCTGTCAAAACTTGGGAATCTGCTCATTTACCA
TCAAAGAAGAACAAAAACTTAAAAGCCTTGAAGAGAAATAAAAGCTGGCATGAACTTCTT
AAACAAGAAAATAATATCCTGCTGATCTTAATATCTGTCTATGTGTGCAAGTTCGGATTG
ATTTTGTTCAGCACTCATTATAAAGAATGGAAGTCTGTTGATTGGGAGGAACTATTGAGG
ATGAAAAGGAATAGCTGCTCATCTCCAGTCTTTGCAAGCTAGGCACCAGTGGATGTTACT
TGCCACAGTTTCCCTCTTCTTTTATCTCATAAATGTAGAAAAATTTAGCTGTAACACTTG
CGAGAATCCCTCAAAATAGTGATGCGAAGAGCTTTTCTGGGACAAATAAAGATCTAAAAC
TCGTTTCCTACTATGCTGGTGGAACTCAATAATAAGAGAGAACCATATAAGGCTATAAGC
ACATTACCTGCCTCTTTTCCCAGTCATATTTGCGCTCACCAACGGATGGCCAGAATGTCA
ACATAATGACACCTCGACGATTGAGTTTAACACCTCCAGACTGTAATAAGAAGAATGGAT
GAGTGGAAGCATCATTTCAACATCATAAAGAGAGGCAACTCCAGTTTCTAATTCTATTTA
AAAAGATAATAAAGACCGTACATCCAGTCTATTAAATGTGGGCAGCCTAGGTTCAGCAGA
AAGTGCTGCTTTGCCTTTAAATACTGAGTAGGGAGCAAACACTCGACCTTCCCGTTTTCC
TGCTATCAAGAAATATGACAAAAAGATTATTATAGCATCAAGATTACAACTGAGACTTCA
CGAACATCTGAAAATAAAATGCATACCATCAGCCACAACATCCTGTCGAACAGTAGAAAA
GGCTGCAAAAGTGTTGATGGCATTCTGCCAGATAGAACCTTTGACATCCTCTCCAGACAA
TTTTTTATGCAACAACTGATTCCTAATGTGTCTAGAGAAAAACATCATATTAAGAAGGTT
CTTTTTCAAAAATTATCAACTTCACTTTAAAAAAATTCTATTCACACTCTGCATGACAAG
CAGTAATTCTTTTTTCCCTACATTGTAAACAGTATTATGGAGTATCCAGCATCAAGAAGT
AATAGTTGAAAATGACATCCCGGATTTTCTTGGTGAATGAGCAACAGATGAAAAGGTGTG
TGTAATGTCCTCACCATGCATTTTACACAGTGAGCATTGCTACAAATATGGACCTATTTT
TCTCTGTGTCTCCATATAACATAACATATGAATGAGGTCTTAATAGATTCAATAGTAATT
TAAGCATGATCAACTTCCTTCAATTTATATGGGGTG