Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g042820.2.1
CDS Infomation

Major facilitator superfamily protein (AHRD V3.3 *** AT1G59740.1)
Sequence

ATGGATAGAGAGGAGACAAGAAAAAATAAATCGAAAAGAGAATCTGCAGTGTCCATGGCG
TCTGCGACACAGAAAATCCCTGTCGATTGGAGAGGAAGACCTTGCAAACCTAACAAACAT
GGTGGCATGACTGCTGCCATCTTTGTATTATGCCTTCAGGCATTTGAAATGATGGCGATT
GCAGCAGTTGGGAATAATCTTATAACGTACGTCTTCAATGAGATGCACTTCCCTCTCTCA
AAGTCAGCAAACATAGTAACAAATTTCATTGGAACTGTTTTTCTCCTCTCCCTTTTTGGT
GGCTTTCTCTCTGATTCTTATCTTGGTAGTTTCTGGACTATGTTCATTTTTGGCTTCGTC
GAGCTCTCTGGGTTTATTCTATTGGCAGTGCAAGCACATGTTCAACAACTAAGACCGCCA
AAGTGTGACATGATGTTGAGCAATGGAAAGTGCTTGAAAGTAAAGGGATATAAAGCTATG
ATATTCTTTGTGGCGCTATACTTGGTTGCTTTAGGTAGCGGTTGTTTAAAACCAAATATA
ATTTCTCATGGGGCTGACCAATTTAAGAAACAGGATTCAAAGAAACTTTCTACTTACTTC
AACTTTGCCTATTTTGCCTTCTGTGCTGGGGAGCTTCTTGCTCTAACACTTGTTGTTTGG
GTCCAAACTCGTTACGGAATGGACGTTGGATTTGGTGTTTCTGCGGCTTCCATGGTCTTT
GGGTTGATCATTTTCCTTTCCGGAACACTTGTTTATAGGAACACACCACCCGGAGGAAGT
ATATTCACACCAATTGCCCAAGTTTTTGTGGCTGCAATCACTAAAAGAAAGGAGAGCTGC
CCTTCAAATTTGAAGATGCTTCATGGAAGCCAATGCATTGTGCCACAGGATGGCACGCTC
ATCCACACGGATAAATTCAGGTTCTTAGACAAGGCATGCATCAAAATAGACAATGGAAGA
AGTACAAGTGAAAGCCCCTGGAGATTATGCACAGTATCTCAAGTGGAGCAAGTAAAAATA
TTAATCTCAGTTGTTCCTATCTTTGCTTGCACCATAATCTTCAACACAATCTTAGCTCAA
CTCCAAACCTTTTCAGTACAACAGGCAACTATAATGAACACACGCTTAACCCACAACTTC
ACGATCCCTCCAGCTTCCCTTCAATCCATACCTTATTTCATGCTAATATTTTTGGTCCCA
CTTTATGAAATAGCATTAGTCCCCGTGATCCGAAAGTTCACGGGCAATGATTCAGGGATC
ACACCTTTACAAAGAGTTGGCATTGGCCTTTTTATTGCTACATTCTCCATGGTTTGTGCT
GCTCTAGTCGAAAACAAGAGAAGAGACTACGCAATGAACCAGAACAGGATACTGTCGATT
TTCTGGATAGTCCCACAATTCATTATTTATGGGCTATCAGAGATGTTTACTGCAGTGGGA
CTTATAGAGTTCTTCTATAAACAATCTCTAGAAGGGATGCAGTCATTCTTAACCGCCATG
ACGTATTGTTCATACTCATTTGGATTTTATTTGAGCTCCATATTAGTTTCATTAGTTAAC
AGAATAACTTCTACTTCAGATGGAGGTGGGTGGTTAAATAATAATGATCTCAACAAGAAT
AGGCTAGATCTTTTTTATTGGCTACTGGCTTCTCTTAGCCTTGTTAACTTCATTAACTAT
GTTTTCTGCTCCAGATGGTATTCCTATAATCCATCTCTGTTACCTGTTGTTCCACTACAT
GAACCACAAGCAGAAGGACATGACTCTGAGAACCCAAATTGA

Peptide Sequence

PEP ID

Solyc11g042820.2.1
PEP Infomation

Major facilitator superfamily protein (AHRD V3.3 *** AT1G59740.1)
Sequence

MDREETRKNKSKRESAVSMASATQKIPVDWRGRPCKPNKHGGMTAAIFVLCLQAFEMMAI
AAVGNNLITYVFNEMHFPLSKSANIVTNFIGTVFLLSLFGGFLSDSYLGSFWTMFIFGFV
ELSGFILLAVQAHVQQLRPPKCDMMLSNGKCLKVKGYKAMIFFVALYLVALGSGCLKPNI
ISHGADQFKKQDSKKLSTYFNFAYFAFCAGELLALTLVVWVQTRYGMDVGFGVSAASMVF
GLIIFLSGTLVYRNTPPGGSIFTPIAQVFVAAITKRKESCPSNLKMLHGSQCIVPQDGTL
IHTDKFRFLDKACIKIDNGRSTSESPWRLCTVSQVEQVKILISVVPIFACTIIFNTILAQ
LQTFSVQQATIMNTRLTHNFTIPPASLQSIPYFMLIFLVPLYEIALVPVIRKFTGNDSGI
TPLQRVGIGLFIATFSMVCAALVENKRRDYAMNQNRILSIFWIVPQFIIYGLSEMFTAVG
LIEFFYKQSLEGMQSFLTAMTYCSYSFGFYLSSILVSLVNRITSTSDGGGWLNNNDLNKN
RLDLFYWLLASLSLVNFINYVFCSRWYSYNPSLLPVVPLHEPQAEGHDSENPN*

Transcript Sequence

Transcript ID

Solyc11g042820.2.1
Transcript Infomation

Major facilitator superfamily protein (AHRD V3.3 *** AT1G59740.1)
Sequence

TTGAGTTGATGGATAGAGAGGAGACAAGAAAAAATAAATCGAAAAGAGAATCTGCAGTGT
CCATGGCGTCTGCGACACAGAAAATCCCTGTCGATTGGAGAGGAAGACCTTGCAAACCTA
ACAAACATGGTGGCATGACTGCTGCCATCTTTGTATTATGCCTTCAGGCATTTGAAATGA
TGGCGATTGCAGCAGTTGGGAATAATCTTATAACGTACGTCTTCAATGAGATGCACTTCC
CTCTCTCAAAGTCAGCAAACATAGTAACAAATTTCATTGGAACTGTTTTTCTCCTCTCCC
TTTTTGGTGGCTTTCTCTCTGATTCTTATCTTGGTAGTTTCTGGACTATGTTCATTTTTG
GCTTCGTCGAGCTCTCTGGGTTTATTCTATTGGCAGTGCAAGCACATGTTCAACAACTAA
GACCGCCAAAGTGTGACATGATGTTGAGCAATGGAAAGTGCTTGAAAGTAAAGGGATATA
AAGCTATGATATTCTTTGTGGCGCTATACTTGGTTGCTTTAGGTAGCGGTTGTTTAAAAC
CAAATATAATTTCTCATGGGGCTGACCAATTTAAGAAACAGGATTCAAAGAAACTTTCTA
CTTACTTCAACTTTGCCTATTTTGCCTTCTGTGCTGGGGAGCTTCTTGCTCTAACACTTG
TTGTTTGGGTCCAAACTCGTTACGGAATGGACGTTGGATTTGGTGTTTCTGCGGCTTCCA
TGGTCTTTGGGTTGATCATTTTCCTTTCCGGAACACTTGTTTATAGGAACACACCACCCG
GAGGAAGTATATTCACACCAATTGCCCAAGTTTTTGTGGCTGCAATCACTAAAAGAAAGG
AGAGCTGCCCTTCAAATTTGAAGATGCTTCATGGAAGCCAATGCATTGTGCCACAGGATG
GCACGCTCATCCACACGGATAAATTCAGGTTCTTAGACAAGGCATGCATCAAAATAGACA
ATGGAAGAAGTACAAGTGAAAGCCCCTGGAGATTATGCACAGTATCTCAAGTGGAGCAAG
TAAAAATATTAATCTCAGTTGTTCCTATCTTTGCTTGCACCATAATCTTCAACACAATCT
TAGCTCAACTCCAAACCTTTTCAGTACAACAGGCAACTATAATGAACACACGCTTAACCC
ACAACTTCACGATCCCTCCAGCTTCCCTTCAATCCATACCTTATTTCATGCTAATATTTT
TGGTCCCACTTTATGAAATAGCATTAGTCCCCGTGATCCGAAAGTTCACGGGCAATGATT
CAGGGATCACACCTTTACAAAGAGTTGGCATTGGCCTTTTTATTGCTACATTCTCCATGG
TTTGTGCTGCTCTAGTCGAAAACAAGAGAAGAGACTACGCAATGAACCAGAACAGGATAC
TGTCGATTTTCTGGATAGTCCCACAATTCATTATTTATGGGCTATCAGAGATGTTTACTG
CAGTGGGACTTATAGAGTTCTTCTATAAACAATCTCTAGAAGGGATGCAGTCATTCTTAA
CCGCCATGACGTATTGTTCATACTCATTTGGATTTTATTTGAGCTCCATATTAGTTTCAT
TAGTTAACAGAATAACTTCTACTTCAGATGGAGGTGGGTGGTTAAATAATAATGATCTCA
ACAAGAATAGGCTAGATCTTTTTTATTGGCTACTGGCTTCTCTTAGCCTTGTTAACTTCA
TTAACTATGTTTTCTGCTCCAGATGGTATTCCTATAATCCATCTCTGTTACCTGTTGTTC
CACTACATGAACCACAAGCAGAAGGACATGACTCTGAGAACCCAAATTGAGGTATATGTA
ATTGAGGAATTAAGCTACTAACTATAGTAATATAAAGCAATAGAAGTTGATAAAGTTGGA
TTGATCTTTCCAGTTCTCTTTCATTTCTTTAAAATAGTATTTCTGTGTATCCAATATATT
GATTGTTTATGATTCATCATCTTGTTCGGTAAGA