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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g040140.2.1
CDS Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4D7Y8_SOLLC)
Sequence

ATGGGCTTCAAATGGACGATGATGTTGGTGTTGTGTGTGTTAATAGGAGGATCAATGGGA
GCTAAGCCCAATAAGCCAATTGATGTCCCATTTGGAAGAAATTATGAACCTAGTTGGGCT
TTTGATCACATCAAATATTTGAATGGTGGCTCTGAGATCCAGCTCTCCCTCGATAACCGC
ACCGGCACTGGTTTTCAGTCAAAAGGATCTTACCTATTTGGGCACTTTTCTATGCACATA
AAGATGGTTGCTGGTGATTCTGCAGGCACTGTCACTGCTTTCTATTTGTCTTCTCAAAAT
TCAGAACATGATGAAATAGACTTCGAGTTCTTGGGGAATAAAACAGGAGAACCATACATT
TTACAAACAAATGTATACACAGGAGGGAAAGGTGACAAAGAGCAAAGGATTTACTTATGG
TTTGATCCAACAAAAGATTATCACACTTACTCTGTCTTGTGGAATCTTCATCAAATTGTA
TTTTTTGTGGATGAGTATCCCATAAGAGTGTTCAAGAACAACAAGAACTTAGGTGTCAAA
TTCCCATTTGACCAATCAATGAAGATATACTCAAGTCTATGGGAAGCAGATGATTGGGCA
ACAAGAGGTGGACTTGAGAAAATTGATTGGTCAAATGCACCCTTTGTTGCCTCATACAAA
GGCTTTCACATTGATGGTTGTGAATCTTCTGTCAATGCCAAATTTTGTGCCAATCAAGGC
AAGAGTTGGTGGGATCAAAAGGAATTTCAAGATTTGGACAAAACTCAATGGAGGCTTTTG
AGAAGAGTTAGGGACAAATATACAATTTATAACTATTGTACTGATAAAAAGAGGTTCTCT
ACAACGCCAATAGAGTGTAAGAGGAATAGAGATGTTCCAAGGAATTCAAGAAAGGAAAAT
TAA

Peptide Sequence

PEP ID

Solyc11g040140.2.1
PEP Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4D7Y8_SOLLC)
Sequence

MGFKWTMMLVLCVLIGGSMGAKPNKPIDVPFGRNYEPSWAFDHIKYLNGGSEIQLSLDNR
TGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNKTGEPYI
LQTNVYTGGKGDKEQRIYLWFDPTKDYHTYSVLWNLHQIVFFVDEYPIRVFKNNKNLGVK
FPFDQSMKIYSSLWEADDWATRGGLEKIDWSNAPFVASYKGFHIDGCESSVNAKFCANQG
KSWWDQKEFQDLDKTQWRLLRRVRDKYTIYNYCTDKKRFSTTPIECKRNRDVPRNSRKEN
*

Transcript Sequence

Transcript ID

Solyc11g040140.2.1
Transcript Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4D7Y8_SOLLC)
Sequence

TCACCCCACGATTCCTTAAAAATCACTTATTATGAAACGAGAGAATTAATTAGCCAGCTA
GTATTGGGACTGCCGAAGTTGCAGTAACTTCCACGTTAGAGTATCTACACTATATATAAT
GGCATAGAATTAGTACATTTTCTCATCCCAAAACCAAAAAATAAATAAATTCTCTTAGTA
GGATTCTATTTATTTTAAAGAATGCTCTTCATTAATTGAGCTTTCTCATTTTTTATTTGA
AAGTCGTAACAACATTTTAATTCGCATAATTTATAGTTATTATTAGAGATTTTCTTTATA
TTCGATTTCTACTCATCGACTCGAAAATAATCGAAACATTATGGGCTTCAAATGGACGAT
GATGTTGGTGTTGTGTGTGTTAATAGGAGGATCAATGGGAGCTAAGCCCAATAAGCCAAT
TGATGTCCCATTTGGAAGAAATTATGAACCTAGTTGGGCTTTTGATCACATCAAATATTT
GAATGGTGGCTCTGAGATCCAGCTCTCCCTCGATAACCGCACCGGCACTGGTTTTCAGTC
AAAAGGATCTTACCTATTTGGGCACTTTTCTATGCACATAAAGATGGTTGCTGGTGATTC
TGCAGGCACTGTCACTGCTTTCTATTTGTCTTCTCAAAATTCAGAACATGATGAAATAGA
CTTCGAGTTCTTGGGGAATAAAACAGGAGAACCATACATTTTACAAACAAATGTATACAC
AGGAGGGAAAGGTGACAAAGAGCAAAGGATTTACTTATGGTTTGATCCAACAAAAGATTA
TCACACTTACTCTGTCTTGTGGAATCTTCATCAAATTGTATTTTTTGTGGATGAGTATCC
CATAAGAGTGTTCAAGAACAACAAGAACTTAGGTGTCAAATTCCCATTTGACCAATCAAT
GAAGATATACTCAAGTCTATGGGAAGCAGATGATTGGGCAACAAGAGGTGGACTTGAGAA
AATTGATTGGTCAAATGCACCCTTTGTTGCCTCATACAAAGGCTTTCACATTGATGGTTG
TGAATCTTCTGTCAATGCCAAATTTTGTGCCAATCAAGGCAAGAGTTGGTGGGATCAAAA
GGAATTTCAAGATTTGGACAAAACTCAATGGAGGCTTTTGAGAAGAGTTAGGGACAAATA
TACAATTTATAACTATTGTACTGATAAAAAGAGGTTCTCTACAACGCCAATAGAGTGTAA
GAGGAATAGAGATGTTCCAAGGAATTCAAGAAAGGAAAATTAAGTTTGGTTTATTATTAG
GCATGTGTCTGATTCTGTAAACGCTATGCATTTTAGAGGATCTAATATGAATATGATAAT
ATTTTTTATAAAATTGAGTATGGAGGCTGTAATATTGTGTGTAGCAAGTCTACTACAATA
CTTTAATAATAATAATAATAATAATAATAATAATAATAATAATGATTTTTAATTTTTGAA
GGAAAGTAGCACTATCATCTACTATTTTTTTAAAAAAAAATATTTGGTGTTTGCTACTTA
TATTGATGCTCGATTGATTTGAACTTGGGTTATGTAACGCTTATAATTAAATAAAATTTC
TTAAACAAAAAT