Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g040050.2.1
CDS Infomation

RNA binding protein, putative (AHRD V3.3 *** B9S3N2_RICCO)
Sequence

ATGGCAAGCTATTCAGGGAAAGGATCTACATTAAATGGTTCTGTGTATGTCTGTAACTTG
CCCCTTGGTACAGATGAAGATATGCTAGCTGAATATTTTGGCACAATAGGGGTGCTAAAG
AAAGACAAACGAAGCGGTAGGCCCAAGATATGGTTATACCGTGATAAAGTTACTAATGAG
CCCAAAGGCGATGCCACAGTCACATATGAAGACCCTCATGCTGCATTAGCTGCTGTTGAA
TGGTTCAATAACAAGGATTTTCATGGGTCAATGATTGGGGTATTTATTGCAGAGTCTAAG
AACAAAGACGAGGCTTCCTATGTTTCAGTGAATCAAATTAGTGAGCCCAATCTGAACAGT
GGTCTGGCTGTGCTGGATGAAGGCTCCAACGATATAGATGGAGGTGGCGGAAGAGGTAGG
GGCAGGGGAGATGCTTCTGCAAAGGCATGGCAACAAGATGGTGACTGGCTGTGTCCAAAT
ACAAGCAGTTGCACTAATGTGAACTTTGCATTTCGTGGAGTTTGCAACCGCTGTGGAACT
GCTCGGCCTGCTGGTGCTGGTGGCGGTGGGGCTGGAGCTGCTGGTCGCGGGAGAGGACGT
GGTAGCCAGGACCCAGGCGCTCCTGGTCGTGCAGTTGGTGGTCCTCCAGGCCTCTTTGGT
CCAAATGATTGGGCTTGTCCGATGTGTGCCAACATTAACTGGGCTAAGAGGAACAAGTGT
AACATATGCAACACCAACAAGCCTGGGCACAATGAGGGTGGTGTGAGAGGAGGACGTGCT
GGAGGTTATAAAGAACTCGATGAAGAAGAAATAGAGGAAACTAGACGTCGGAGGAGAGAG
GCTGAAGAAGATGATGGTGAAATGTATGACGAGTTTGGAAATCTGAAGAAGAAGTTTCGT
GCTAAAACACAGCGAGCAGAAGCAGCCCAGAGCCTCCCCCCTGGAGTAGGACGCGCTGGA
TGGGAAGCTGAGGAATTAGGGGTGGCGGAGCGAGATAGAAAGGAAAGAAGCAGAGAAAGA
TCAAGAGATTATGATGATAGGGAGAGAGCTAGGCATCGAAGCAGAAGTCGGGAAAGGGAT
AGGGGAAGAGATAGAGACCGCTCCTACGACTATGATCGAGACAGAGAATATGGTCGTGAC
CGCGACCGTGAGCGGAACAAGTATCGTCATTGA

Peptide Sequence

PEP ID

Solyc11g040050.2.1
PEP Infomation

RNA binding protein, putative (AHRD V3.3 *** B9S3N2_RICCO)
Sequence

MASYSGKGSTLNGSVYVCNLPLGTDEDMLAEYFGTIGVLKKDKRSGRPKIWLYRDKVTNE
PKGDATVTYEDPHAALAAVEWFNNKDFHGSMIGVFIAESKNKDEASYVSVNQISEPNLNS
GLAVLDEGSNDIDGGGGRGRGRGDASAKAWQQDGDWLCPNTSSCTNVNFAFRGVCNRCGT
ARPAGAGGGGAGAAGRGRGRGSQDPGAPGRAVGGPPGLFGPNDWACPMCANINWAKRNKC
NICNTNKPGHNEGGVRGGRAGGYKELDEEEIEETRRRRREAEEDDGEMYDEFGNLKKKFR
AKTQRAEAAQSLPPGVGRAGWEAEELGVAERDRKERSRERSRDYDDRERARHRSRSRERD
RGRDRDRSYDYDRDREYGRDRDRERNKYRH*

Transcript Sequence

Transcript ID

Solyc11g040050.2.1
Transcript Infomation

RNA binding protein, putative (AHRD V3.3 *** B9S3N2_RICCO)
Sequence

ATGGCAAGCTATTCAGGGAAAGGATCTACATTAAATGGTTCTGTGTATGTCTGTAACTTG
CCCCTTGGTACAGATGAAGATATGCTAGCTGAATATTTTGGCACAATAGGGGTGCTAAAG
AAAGACAAACGAAGCGGTAGGCCCAAGATATGGTTATACCGTGATAAAGTTACTAATGAG
CCCAAAGGCGATGCCACAGTCACATATGAAGACCCTCATGCTGCATTAGCTGCTGTTGAA
TGGTTCAATAACAAGGATTTTCATGGGTCAATGATTGGGGTATTTATTGCAGAGTCTAAG
AACAAAGACGAGGCTTCCTATGTTTCAGTGAATCAAATTAGTGAGCCCAATCTGAACAGT
GGTCTGGCTGTGCTGGATGAAGGCTCCAACGATATAGATGGAGGTGGCGGAAGAGGTAGG
GGCAGGGGAGATGCTTCTGCAAAGGCATGGCAACAAGATGGTGACTGGCTGTGTCCAAAT
ACAAGCAGTTGCACTAATGTGAACTTTGCATTTCGTGGAGTTTGCAACCGCTGTGGAACT
GCTCGGCCTGCTGGTGCTGGTGGCGGTGGGGCTGGAGCTGCTGGTCGCGGGAGAGGACGT
GGTAGCCAGGACCCAGGCGCTCCTGGTCGTGCAGTTGGTGGTCCTCCAGGCCTCTTTGGT
CCAAATGATTGGGCTTGTCCGATGTGTGCCAACATTAACTGGGCTAAGAGGAACAAGTGT
AACATATGCAACACCAACAAGCCTGGGCACAATGAGGGTGGTGTGAGAGGAGGACGTGCT
GGAGGTTATAAAGAACTCGATGAAGAAGAAATAGAGGAAACTAGACGTCGGAGGAGAGAG
GCTGAAGAAGATGATGGTGAAATGTATGACGAGTTTGGAAATCTGAAGAAGAAGTTTCGT
GCTAAAACACAGCGAGCAGAAGCAGCCCAGAGCCTCCCCCCTGGAGTAGGACGCGCTGGA
TGGGAAGCTGAGGAATTAGGGGTGGCGGAGCGAGATAGAAAGGAAAGAAGCAGAGAAAGA
TCAAGAGATTATGATGATAGGGAGAGAGCTAGGCATCGAAGCAGAAGTCGGGAAAGGGAT
AGGGGAAGAGATAGAGACCGCTCCTACGACTATGATCGAGACAGAGAATATGGTCGTGAC
CGCGACCGTGAGCGGAACAAGTATCGTCATTGAAGATTGCGTGCGACCATTCCATCAAAT
ATGGTATTCATCAAACTTTGTTTGTCTCATGTTTTTGTATGGGTGGCTACTCGTATGGCA
CCTTCTTAAGGTTGCTTCATTTCTGTCAGATTCATATGTCGACTTTTCGACTTAATCTTG
GTCATTTTTTTTCACTCATATGTTGAATATTTGACGTGCATTTCGCAGCGTCTTTTGCCT
TATTTGTACGTCCCTTTCTTTCTTTTTCTAAGGAGGCTATCACAATCTTTTCCTGTGCAT
CTTTAATTTCTTTCCATAGTTGAACTGTTAAGAGATTCTAGAATCAGTTTACTATACTCC
TTGAAAATATGGAGGT