Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g027880.2.1
CDS Infomation

Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** AT1G72160.1)
Sequence

ATGGCTGAAACAGAGCATACCCATCAGCCCCCACTCCCGGCTGAGGAAGATATACTATCT
CCACCTTCACCAGAACCACTTCTTGCTTCAGTTGAAGTTGAATCAGTTGTAGAAGCTGTA
GAGGAGCATCACTCTGTTGTTACTGTTGTTGAAAAGGAGGGTCCTTTAACTGAACTTCCA
CAAGAACCAACAAAAACTCTTGCTGAGGCTCAACAGGTCTCTATTACACTTCCTGAGAGA
GAACCTACGGAATCTGACAAATCTAAACCTGTTGAAGACAAAAAGATCCCTCAATCTTTG
ATTTCATTTAAAGAAGAAAGCAATAAAGTTTCAGATCTATCTGATTCTGAGGTAAAAGCA
CTTGAAGATTTTAAATTTCTTGTTCAAGAAGCTGTTAAAGATCAGACCTTTACTACTGGA
ACAACAGATTTGCCTCAAGAAGTATCTATTTGGGGTGTACCATTATTGAAAGATGATAGG
AGTGATGTTATTCTGCTTAAGTTTCTTAGAGCTAGAGATTTCAAGGTTAAGGAGTCATTT
GCTATGTTAAAGAACACAATTTTATGGAGAAAGGAGTTCAATATTGAAGAACTAGTAGAT
GAAAATCTTGGGGATGATCTTGAAAAAGTAGTGTTTATGGATGGTCATGATAAAGAGGGA
CACCCTGTTTGTTATAATGTGTATGGGGAGTTTCAGAATAAGGAATTGTATAACAAAACA
TTTGGCGATGAGGAGAAGAGAAACAAGTTTTTGCGCTGGAGGATTCAGTTCTTAGAGAGG
AGTATAAGGAAGTTGGATTTCAGTCCTGGTGGAATCAATACTATATTTCAAGTCAGTGAC
CTCAAGAACTCACCTGGTCCAGGGAAAAGGGAACTTCGAATTGCTACTAGGCAGGCCTTG
CAATTGCTTCAGGATAATTATCCCGAATTCGTTGCTAAGCAGGTGTTTATCAATGTGCCT
TGGTGGTATTTAGCTTTCTACACAATGATCAGCCCATTCATGACGCAGAGAACAAAAAGC
AAGTTTGTATTTGCTGGTCCATCAAAGACTGCAGAAACTCTTTACAAGTATATAACTCCT
GAGCAAGTACCTGTTCAATATGGGGGCCTCAGCGTCGATTACTGTGAATGCAATCCTGAG
TTCACTTCCAATGATCCAGTCACAGAGATCATTGTTAAACCAGCAACAAAGCAAACCGTG
GAGATCATTGTAAATGAGAAGTGCATTATTGTCTGGGAGCTACGTGTATTGGGTTGGGAG
GTGACATATAGTGCTGAATATGTGCCAAATACAGACAGTGGATACACTGTGAACATACAG
AAGCCTAGGAAGATGACGACAGCTGATGAACCTGTTGTTAGCAGCAGCTTCAAGATCGTC
GAGCTAGGTAAGATACTGTTGACGATTGACAACCCTACGTCAAAGAAGAAGAAGCTTCTG
TACAGGTTCAAGGATAAGCCCTATTCTGATTGA

Peptide Sequence

PEP ID

Solyc11g027880.2.1
PEP Infomation

Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** AT1G72160.1)
Sequence

MAETEHTHQPPLPAEEDILSPPSPEPLLASVEVESVVEAVEEHHSVVTVVEKEGPLTELP
QEPTKTLAEAQQVSITLPEREPTESDKSKPVEDKKIPQSLISFKEESNKVSDLSDSEVKA
LEDFKFLVQEAVKDQTFTTGTTDLPQEVSIWGVPLLKDDRSDVILLKFLRARDFKVKESF
AMLKNTILWRKEFNIEELVDENLGDDLEKVVFMDGHDKEGHPVCYNVYGEFQNKELYNKT
FGDEEKRNKFLRWRIQFLERSIRKLDFSPGGINTIFQVSDLKNSPGPGKRELRIATRQAL
QLLQDNYPEFVAKQVFINVPWWYLAFYTMISPFMTQRTKSKFVFAGPSKTAETLYKYITP
EQVPVQYGGLSVDYCECNPEFTSNDPVTEIIVKPATKQTVEIIVNEKCIIVWELRVLGWE
VTYSAEYVPNTDSGYTVNIQKPRKMTTADEPVVSSSFKIVELGKILLTIDNPTSKKKKLL
YRFKDKPYSD*

Transcript Sequence

Transcript ID

Solyc11g027880.2.1
Transcript Infomation

Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** AT1G72160.1)
Sequence

TATTATTAACTATGGTTTCAATACTTTTCTCCATAAAAAAATTTAGTAAGATGGCATGTT
TTATAGGTACCTAGGATTCCCACATTGTAACGAAAAAACTGCAGAGCCCTAAACCCTTCG
TGTCAACCCTTAACCTCAACAGCTCACAAGCAAAAAACAGCATCACTCTGCTTAGCCGTT
TGCTTTTTTTTTTTTTTAATTGGTCCAAAAAGGTGCCTTTATTTCTCTCTGGAATGAACT
GAAAGCTACTCTTTCCCAGCTGTAAGTAAAGACTAAACCAAAGCTGAAAGCAGCATAAAC
ATTTGCTTTTCTTTGCCAACAATGGCTGAAACAGAGCATACCCATCAGCCCCCACTCCCG
GCTGAGGAAGATATACTATCTCCACCTTCACCAGAACCACTTCTTGCTTCAGTTGAAGTT
GAATCAGTTGTAGAAGCTGTAGAGGAGCATCACTCTGTTGTTACTGTTGTTGAAAAGGAG
GGTCCTTTAACTGAACTTCCACAAGAACCAACAAAAACTCTTGCTGAGGCTCAACAGGTC
TCTATTACACTTCCTGAGAGAGAACCTACGGAATCTGACAAATCTAAACCTGTTGAAGAC
AAAAAGATCCCTCAATCTTTGATTTCATTTAAAGAAGAAAGCAATAAAGTTTCAGATCTA
TCTGATTCTGAGGTAAAAGCACTTGAAGATTTTAAATTTCTTGTTCAAGAAGCTGTTAAA
GATCAGACCTTTACTACTGGAACAACAGATTTGCCTCAAGAAGTATCTATTTGGGGTGTA
CCATTATTGAAAGATGATAGGAGTGATGTTATTCTGCTTAAGTTTCTTAGAGCTAGAGAT
TTCAAGGTTAAGGAGTCATTTGCTATGTTAAAGAACACAATTTTATGGAGAAAGGAGTTC
AATATTGAAGAACTAGTAGATGAAAATCTTGGGGATGATCTTGAAAAAGTAGTGTTTATG
GATGGTCATGATAAAGAGGGACACCCTGTTTGTTATAATGTGTATGGGGAGTTTCAGAAT
AAGGAATTGTATAACAAAACATTTGGCGATGAGGAGAAGAGAAACAAGTTTTTGCGCTGG
AGGATTCAGTTCTTAGAGAGGAGTATAAGGAAGTTGGATTTCAGTCCTGGTGGAATCAAT
ACTATATTTCAAGTCAGTGACCTCAAGAACTCACCTGGTCCAGGGAAAAGGGAACTTCGA
ATTGCTACTAGGCAGGCCTTGCAATTGCTTCAGGATAATTATCCCGAATTCGTTGCTAAG
CAGGTGTTTATCAATGTGCCTTGGTGGTATTTAGCTTTCTACACAATGATCAGCCCATTC
ATGACGCAGAGAACAAAAAGCAAGTTTGTATTTGCTGGTCCATCAAAGACTGCAGAAACT
CTTTACAAGTATATAACTCCTGAGCAAGTACCTGTTCAATATGGGGGCCTCAGCGTCGAT
TACTGTGAATGCAATCCTGAGTTCACTTCCAATGATCCAGTCACAGAGATCATTGTTAAA
CCAGCAACAAAGCAAACCGTGGAGATCATTGTAAATGAGAAGTGCATTATTGTCTGGGAG
CTACGTGTATTGGGTTGGGAGGTGACATATAGTGCTGAATATGTGCCAAATACAGACAGT
GGATACACTGTGAACATACAGAAGCCTAGGAAGATGACGACAGCTGATGAACCTGTTGTT
AGCAGCAGCTTCAAGATCGTCGAGCTAGGTAAGATACTGTTGACGATTGACAACCCTACG
TCAAAGAAGAAGAAGCTTCTGTACAGGTTCAAGGATAAGCCCTATTCTGATTGAGTGAGA
TACTGTAATCATTTCATCATGGGATGACTGTGGATATGAATTTTGACATGCACACATCTT
TATGTATGAGGAGCTGGAATTTGTGTTGATTCACTTTGTTGGTTCATGGATATTCTAGGT
TGTTTTTTTCTTTTTTTATGAATTTCTTCTTTGTAGCTGAAATTGTACTGTCCTTTCTTT
GACCTGAGGGCAAATGTTAGAATTCTCCCTGTAACTTTGGTATTTGGTTTGATACTTGAA
CGTGACGATGTTGTAGGCTTCTGGCCAAGAATGAAGAATTTGAGTTGCAGCGGATATGTG
TGTACGTTGAGTTGAAGAATTTGATGATTTTATCAGTTACATAATAGTCATGTCATGTAC
AATATATTTGACCAGAACACCTTTTGGTAGTGAATGTAAGCATGGGCCTACTTAATCTGG
TAAAGCAGCTAAACTTTCTGGTGTTGGAGTGCAACTTTTTGAGATGAAGGATGAGGTTCA
AAGGCTGTTCACTGTTAATATACAGTACAGTTATATATGTAATATCAATTTGACTAATGT
GTCAAAGTTAAATTAGAGTAGATCAACCGAATATAAAACAAGCAAGACGAAAAGAGCGTA
AAGATAGATTAATCAGTAGGAGAATATATTCATGTTTAAGTTGTATTGTTTTTTCAGAGA
AAGATAAATTTTTGATGCACTTTCTTCCAATTTCTCTGTTCAAAGGTAGTGGCAAAGAGC
CTTGTCTCACAAATTTTCCAATTTACTTCCACTTGATAAAGTAATTAAATAAGAATTAAT
TTTTTATAACATAACCTACTATTAAAAATTGTATCGAGTTGTATTGTTAGTTTAAAT