Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g027840.2.1
CDS Infomation

1,4-beta-D-glucanase (AHRD V3.3 *** B4FHX7_MAIZE)
Sequence

ATGGAGTCAGCCCTGGTGTGTTCAACCGCTCCAAGAACGACTACGAGCAGTCTCCTTAAA
AAAAGAGAGACACCACTTGATGCTCCCTTTGGTCTTTCATTTTCGAGAAACTATGTCAAG
TGTTGGGGTATTTCGTTATCCTTGAGAAAGACTAAGAAATACAAAGTCTTTAATTGCAAT
GTGAAAGTAGAGGATGAGGCTTGTGAACTAGTTAACGGAGTTGAGCTTTCCATTGGGGAT
GGAGTTGATAGCATTGATGCTTATCTCTGTAATGCTGTAAGGAACAACAATGGTACTGGC
ATTTTGCTCTTATCTGATATCTTTGGATTTGAGGACTCATTTACGAGAGATTTTTCATAC
CGTGTTGCATGCAATGGATACAATGTTCTGGTACCAGATATGTTCCGTGGAAATCCATGG
AGAAAGGATGAATCCAAAGCTTTGTTTGAGCAATGGATTGGTAGTGTAGACAAACAACAG
GTTGTGAGAGACATTTTCACATCGACTAAATGGATGGCCAATGAGTTTGTGGCTGCAGGA
ATATCAAAGAAGTTTGGAGTGATTGGATTTTGCTTTGGCGGTGGCGTGTTAATAGACATA
TTGGCTCAAGATAAGGGTAGTGAGTTTGGTGTTGGGATCTCATTCTATGGTACACGGATC
GACTTATCTGTTACTAGCAAGATTGAGGTACCTCTACTACTTATTGCTGGTGACAGTGAT
CCACTTTGTCCTGTGAATGTGTTGAAGGAGGTTGAAAATAACGCGAATGGTTGCAAAATG
GCGATTTTTGAGGGAAGGGGTCATGATTTTGCCCATCGACCTCAATCCTTAGAAGACGAT
AAAGATGCAGAAGAGGCATTCTTGATGATGAGAAACTGGCTGCATGATGGACTACATTCT
GAAAATTGA

Peptide Sequence

PEP ID

Solyc11g027840.2.1
PEP Infomation

1,4-beta-D-glucanase (AHRD V3.3 *** B4FHX7_MAIZE)
Sequence

MESALVCSTAPRTTTSSLLKKRETPLDAPFGLSFSRNYVKCWGISLSLRKTKKYKVFNCN
VKVEDEACELVNGVELSIGDGVDSIDAYLCNAVRNNNGTGILLLSDIFGFEDSFTRDFSY
RVACNGYNVLVPDMFRGNPWRKDESKALFEQWIGSVDKQQVVRDIFTSTKWMANEFVAAG
ISKKFGVIGFCFGGGVLIDILAQDKGSEFGVGISFYGTRIDLSVTSKIEVPLLLIAGDSD
PLCPVNVLKEVENNANGCKMAIFEGRGHDFAHRPQSLEDDKDAEEAFLMMRNWLHDGLHS
EN*

Transcript Sequence

Transcript ID

Solyc11g027840.2.1
Transcript Infomation

1,4-beta-D-glucanase (AHRD V3.3 *** B4FHX7_MAIZE)
Sequence

CTTGAATCCTTGAATATACAAGTAGATATATCGAACTTTTCAGATAACCACGGATTCTGA
TGACCCATTTTTTAACTTATTAAATTCGCCCCTTCTTAGGATAACGGCGAAGTATTTATT
ATTTTACATAAGTGATCTATTTCGAGATGCTTTCCCATTTTATAATTTGTTGGGTTAGTT
TAGATGCAGTTCTACTATTCCATCGGATAGCTATCACCGCACCAACACAATTATTATGCT
TATCTTTATTGCAGAATGGTCATACTTTGTCGAACTCAAGCAGGCAAAATTTTAAATGTG
TCGATGAGTGGAAAAAAAAGATATCATTTGTGAAATTATTTAGGATTGAGTTCCTTGTTG
GCAAAGAAAGAAGATAAAACATATAGATATTTAACATTTGAGGCTCCAATTGTTGAAAGC
AAAGATATTTTCTCCATTGTCCACTAGTTACTCCTTTTTCTTCTCTCTGTATTTGTCACA
TATCTTTACTTGATTAGCAGAAGACATAGTTGAAAGAATGGAGTCAGCCCTGGTGTGTTC
AACCGCTCCAAGAACGACTACGAGCAGTCTCCTTAAAAAAAGAGAGACACCACTTGATGC
TCCCTTTGGTCTTTCATTTTCGAGAAACTATGTCAAGTGTTGGGGTATTTCGTTATCCTT
GAGAAAGACTAAGAAATACAAAGTCTTTAATTGCAATGTGAAAGTAGAGGATGAGGCTTG
TGAACTAGTTAACGGAGTTGAGCTTTCCATTGGGGATGGAGTTGATAGCATTGATGCTTA
TCTCTGTAATGCTGTAAGGAACAACAATGGTACTGGCATTTTGCTCTTATCTGATATCTT
TGGATTTGAGGACTCATTTACGAGAGATTTTTCATACCGTGTTGCATGCAATGGATACAA
TGTTCTGGTACCAGATATGTTCCGTGGAAATCCATGGAGAAAGGATGAATCCAAAGCTTT
GTTTGAGCAATGGATTGGTAGTGTAGACAAACAACAGGTTGTGAGAGACATTTTCACATC
GACTAAATGGATGGCCAATGAGTTTGTGGCTGCAGGAATATCAAAGAAGTTTGGAGTGAT
TGGATTTTGCTTTGGCGGTGGCGTGTTAATAGACATATTGGCTCAAGATAAGGGTAGTGA
GTTTGGTGTTGGGATCTCATTCTATGGTACACGGATCGACTTATCTGTTACTAGCAAGAT
TGAGGTACCTCTACTACTTATTGCTGGTGACAGTGATCCACTTTGTCCTGTGAATGTGTT
GAAGGAGGTTGAAAATAACGCGAATGGTTGCAAAATGGCGATTTTTGAGGGAAGGGGTCA
TGATTTTGCCCATCGACCTCAATCCTTAGAAGACGATAAAGATGCAGAAGAGGCATTCTT
GATGATGAGAAACTGGCTGCATGATGGACTACATTCTGAAAATTGATACTCATTCTGTGA
ATAGTCAATCTGTTGTGTGATGAAATGCAATTTGAAACTTCCTTTCTTTAGTCTTATAAA
GTATAAGAAATCTCATTTTCAACAACAGTCGTAACTATTGATCACTAACAACAAATAGC