Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g019950.2.1
CDS Infomation	Long chain base biosynthesis protein 1 (AHRD V3.3 *** LCB1_ARATH)
Sequence	ATGGATACAACAATATCAGTTCTTACAAATAAGCTGAGAGATGCATCTGATTGGGTCACA TGGATATCCGAAGCTCCGTTTGCAAGAGCTGTGGTGTTTGGAGTTAACATTGGAGGGCAT CTATTTGTTGAGGGTCTTCTCCTGGTGGTCATCCTTTTCCTACTATCACAGAAAAGTTAT AAACCACCTAAAAGACCATTGACAAAGAAGGAAATAGATGAACTGTGTGATGAATGGGTC CCGGAACCTCTTATTCCCACCATTACAGATGAGATGAAATCGGAGCCTCCAGTACTTGAA AGCGCTGCAGGTCCTCATACAACTATTAATGGCAAGGAAGTAATAAATTTCACTTCAGCT AATTACCTTGGGTTATTAGGAAATGAAAAGTTACTTGAGACATGCACCAGGGCATTGGAG AAATATGGTGTAGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTTCACCTT GATTGTGAGGCCAGGATAGCTAAGTTTCTTGGAACTCCCGATTCTATACTCTACTCTTAT GGACTTTCTACCATGTTCAGTGCAATTCCAGCATTTTGCAAGAAGGGAGATGTCATTGTT GCGGATGAAGGTGTCCATTGGGGAATACAAAATGGACTTCAGCTCTCTAGAAGTACAATC ATATACTTCAAGCACAATGATATGGAGTCCTTGAGAAATACATTGGAGAAAATCACTCAA GAAAACAAGCAAGCTAAAAAACTTAGGCGATATATTATTGTTGAAGCACTATATCAGAAT TCTGGTCAAATAGCTCCATTGGATGAAATCATCAAACTGAAAGAAAAATACAGATTCCGG GTATTGTTGGATGAAAGCAATTCCTTGGGTGTGCTTGGCAGTTCTGGTAAAGGTCTAACA GAGTATTACAATGTGCCGGTTGACAAGATAGATATCATTACGGCTGCCATGGGGCATGCA TTGGCCACAGAAGGAGGATTTTGCACCGGGAGTACAAGAGTCATTGAACACCAGCGTCTC AGTAGCTCTGGCTATGTGTTTTCTGCTTCTTTGCCTCCTTATCTGGCAAGTGCCGCAGTC AAAGCTTTTGATATATTGGAAGAAAATCCTGGTCTTATCACAAAATTGAGGAAGAACATT AATACACTGTTTAAAGGTCTAAAAGATATTCAGGGGATGGAAATAATGAGCGATCCACTA TCTCCGATAGTTTTTCTAAGACTCAAGAAGTCCACAGGTTCTTCAAAGAGTGATCTAAAA CTATTAGAAGATATCACGGATCGTGTCTTGAAGGAAGATTCCGTTTTTGTTGTTACTTCA AAGAGATCAACACTTGATAAATGTAATTTGCCAGTTGGGCTTCGATTGTTTGTGTCAGCA GGACACTCAGTATCTGATATGGAGAAAGCTAGTAAATCATTGAAGAGAGTCGCGGCTTCG CTATTGACAGATCAGAGCTAG

Peptide Sequence

PEP ID	Solyc11g019950.2.1
PEP Infomation	Long chain base biosynthesis protein 1 (AHRD V3.3 *** LCB1_ARATH)
Sequence	MDTTISVLTNKLRDASDWVTWISEAPFARAVVFGVNIGGHLFVEGLLLVVILFLLSQKSY KPPKRPLTKKEIDELCDEWVPEPLIPTITDEMKSEPPVLESAAGPHTTINGKEVINFTSA NYLGLLGNEKLLETCTRALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSY GLSTMFSAIPAFCKKGDVIVADEGVHWGIQNGLQLSRSTIIYFKHNDMESLRNTLEKITQ ENKQAKKLRRYIIVEALYQNSGQIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGKGLT EYYNVPVDKIDIITAAMGHALATEGGFCTGSTRVIEHQRLSSSGYVFSASLPPYLASAAV KAFDILEENPGLITKLRKNINTLFKGLKDIQGMEIMSDPLSPIVFLRLKKSTGSSKSDLK LLEDITDRVLKEDSVFVVTSKRSTLDKCNLPVGLRLFVSAGHSVSDMEKASKSLKRVAAS LLTDQS*

Transcript Sequence

Transcript ID	Solyc11g019950.2.1
Transcript Infomation	Long chain base biosynthesis protein 1 (AHRD V3.3 *** LCB1_ARATH)
Sequence	TTTCCTTTTTCTGCAATCAATGCTCATTATAATTTATATATATTTATATATTCATTTCAA AACCAAGAATCACCAAATCCTCTATTTAAAATCTTGAATTTGGTAATAAATTTATCGTTG AAGACTCCATTGAAGTTTCAAGAACCACTCTTTCAGCCCTGTCTGCAATTGACATAGATA ATGGATACAACAATATCAGTTCTTACAAATAAGCTGAGAGATGCATCTGATTGGGTCACA TGGATATCCGAAGCTCCGTTTGCAAGAGCTGTGGTGTTTGGAGTTAACATTGGAGGGCAT CTATTTGTTGAGGGTCTTCTCCTGGTGGTCATCCTTTTCCTACTATCACAGAAAAGTTAT AAACCACCTAAAAGACCATTGACAAAGAAGGAAATAGATGAACTGTGTGATGAATGGGTC CCGGAACCTCTTATTCCCACCATTACAGATGAGATGAAATCGGAGCCTCCAGTACTTGAA AGCGCTGCAGGTCCTCATACAACTATTAATGGCAAGGAAGTAATAAATTTCACTTCAGCT AATTACCTTGGGTTATTAGGAAATGAAAAGTTACTTGAGACATGCACCAGGGCATTGGAG AAATATGGTGTAGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTTCACCTT GATTGTGAGGCCAGGATAGCTAAGTTTCTTGGAACTCCCGATTCTATACTCTACTCTTAT GGACTTTCTACCATGTTCAGTGCAATTCCAGCATTTTGCAAGAAGGGAGATGTCATTGTT GCGGATGAAGGTGTCCATTGGGGAATACAAAATGGACTTCAGCTCTCTAGAAGTACAATC ATATACTTCAAGCACAATGATATGGAGTCCTTGAGAAATACATTGGAGAAAATCACTCAA GAAAACAAGCAAGCTAAAAAACTTAGGCGATATATTATTGTTGAAGCACTATATCAGAAT TCTGGTCAAATAGCTCCATTGGATGAAATCATCAAACTGAAAGAAAAATACAGATTCCGG GTATTGTTGGATGAAAGCAATTCCTTGGGTGTGCTTGGCAGTTCTGGTAAAGGTCTAACA GAGTATTACAATGTGCCGGTTGACAAGATAGATATCATTACGGCTGCCATGGGGCATGCA TTGGCCACAGAAGGAGGATTTTGCACCGGGAGTACAAGAGTCATTGAACACCAGCGTCTC AGTAGCTCTGGCTATGTGTTTTCTGCTTCTTTGCCTCCTTATCTGGCAAGTGCCGCAGTC AAAGCTTTTGATATATTGGAAGAAAATCCTGGTCTTATCACAAAATTGAGGAAGAACATT AATACACTGTTTAAAGGTCTAAAAGATATTCAGGGGATGGAAATAATGAGCGATCCACTA TCTCCGATAGTTTTTCTAAGACTCAAGAAGTCCACAGGTTCTTCAAAGAGTGATCTAAAA CTATTAGAAGATATCACGGATCGTGTCTTGAAGGAAGATTCCGTTTTTGTTGTTACTTCA AAGAGATCAACACTTGATAAATGTAATTTGCCAGTTGGGCTTCGATTGTTTGTGTCAGCA GGACACTCAGTATCTGATATGGAGAAAGCTAGTAAATCATTGAAGAGAGTCGCGGCTTCG CTATTGACAGATCAGAGCTAGCAGAAGGACGTGGTTTCATCATCTTAAAACTTTGTTGAA AATAGGGGCAGAAACATTCTGGGAGTTCAAATAGGTACATGGAAAAAAATATTGAAGATA CTTCTCTTCATTAGTGTTTGCATGTCAACTATATTAGATAGATCAAGATTTGCTTCTTGA GGTTGCCATGCTGCAAGCCCAGAGAAGTCAGTTGTCTTGATTAATGTTGTGTTTTATGTA GTTGTGTTAATCTTCTTCCCCTTACTGATTATATAAAGAAAAATAGAATGGTGGGATTTT GTAGTTGACTGTATAGACATGTTATTTCTTATTGGTGTGGAAGTGACAAATCTCAAT