Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g019930.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G35625.1)
Sequence

ATGATGAATTTGTGGGTATTTTGGTACTTGAGTGTTGTTTGTTTTTTGGGTTGTAGAGTT
CTTGGTAATGTGGTTTTGGTAGGAAAGAATGAAACTTTATCGTTTGAAGACATTGAAGCT
AATTTTGCTCCCTCAGTAAGAGGATCAGGCAAATGCGGGATATTGTATGTGGCGGAGCCT
TTAGATGCCTGCTCGACTTTGACCAACAAGGTTGAACCAGTTAAAAATAGCACCCATGAT
CTGTTCTTGCTGATAATAAGGGGTGGATGTAGTTTTGAAGATAAAGTCAGACAAGCCCAG
GCGGCAGGTTCCAAGGCAGCCATTATCTACAACGATGAATACGGTGATCTAGTTGCAATG
GCAGGAAACTCTGCTGGTGTACAGATACCCGCGGTGTTTGTTTCTAGAGTTTCAGGGGAA
AAAATGACAAAGTATGCTGGTGACATTGATGTTGAAGTATGGATAATCCCAAGCTTTGAG
AACTCTGCCTGGTCCATCATGGCTATATCATTCATTTCGTTACTAGCTATGTCAGCAGTG
CTTGCTACCTGTTTCTTTGTCCGTAGACATCGGATACGAAGAGACCGGCCTCGGGCCTCA
CGCTTTCGTGAATTTCATGGAATGAGTAGTCATTTGGTGAAAGCTATGCCAAGCTTGATA
TTTACATCAGTTTTGGAGGATAATTGTACATCAGTAACATGTGCTATCTGTCTTGAAGAC
TATATTGTGGGAGACAAGCTTAGAATTCTTCCTTGCAGGCACAAATTTCATGCTATGTGC
GTTGATGCGTGGCTTACATCATGGAGAACGTTTTGCCCCGTCTGTAAACGTGATGCAAGG
ACTAGCAATGGTGAGCCACCAGCATCAGAATCTACGCCATTGCTTTCTTCTAGTCTAGCT
TCTTTATCTTCGTTGTCATCCCTAAGATCATCATTAGCTTCATCATCAGCAATACAAATA
GGCCAAGGAGCATCCCGATCCCCTTCAGTTTCTCGTCCTCAATCAATTTCTAGTACTCCT
TATAATCATCAGTCGCTTCAGTCCTACCATCAGTCACCTCATCTTACTATAAGCCGCAGT
TCACTTGACCTTCAAAATGCGTCTTCCCAGAGATCTCGTGCATCTTATTTGATTTCCCCT
CACTCATTGGGTTATCCTTCTTTATCTCCTCTTAATTCAAGATACATGTCACCATATATT
CCTAGTCCAGGAAATGCCTCGTCCAGTTATATAGGCTCCTCAAGTCGGCATCCCAACCCA
CTGCGTCATAGTGAGTCAACTACTAGCTTTTCGCCATTTGCTTCAGCTCAGTCTCTTCCG
GGATGTGAGTCATGA

Peptide Sequence

PEP ID

Solyc11g019930.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G35625.1)
Sequence

MMNLWVFWYLSVVCFLGCRVLGNVVLVGKNETLSFEDIEANFAPSVRGSGKCGILYVAEP
LDACSTLTNKVEPVKNSTHDLFLLIIRGGCSFEDKVRQAQAAGSKAAIIYNDEYGDLVAM
AGNSAGVQIPAVFVSRVSGEKMTKYAGDIDVEVWIIPSFENSAWSIMAISFISLLAMSAV
LATCFFVRRHRIRRDRPRASRFREFHGMSSHLVKAMPSLIFTSVLEDNCTSVTCAICLED
YIVGDKLRILPCRHKFHAMCVDAWLTSWRTFCPVCKRDARTSNGEPPASESTPLLSSSLA
SLSSLSSLRSSLASSSAIQIGQGASRSPSVSRPQSISSTPYNHQSLQSYHQSPHLTISRS
SLDLQNASSQRSRASYLISPHSLGYPSLSPLNSRYMSPYIPSPGNASSSYIGSSSRHPNP
LRHSESTTSFSPFASAQSLPGCES*

Transcript Sequence

Transcript ID

Solyc11g019930.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT1G35625.1)
Sequence

GCTTGAGATAATCATCACACAACAGTGAGCACACACTGTGTAAACCATATCGTATATAAA
TATGGCAATATTTTTATTGTTTTCCTTTCTTAAATGTATACTTTGTCACCCAAAATTCAC
AAATTCTTCCACAAACTTTTCTTTTTTTCTCCTCCTCTCCCAAAACACCCTACAGGGAAA
AAGAAAAGGAAAAAAAGGACTAAAATTATCACTAAGCGAATGTTTCCTTCTTGTTGGATA
GAGAATGGAAGCTGATGTTTCTATTCTTTCGACAAAGTTAAAAAAAAAAAGATTTCTTTT
TTGTGGGATTTTCTTGAAAATTAGCGTATAGTGTTGTGGGGTTTTGTGAGATTTGGGTTG
TGCTTGTGGAGTCAAAGATGGTGAATTGAATAGTGGGTTTTTGGGTTTCTTCTTATTTTA
TTGATAATTGGCAGAGAGGGTTTGTTAGAGATGATGAATTTGTGGGTATTTTGGTACTTG
AGTGTTGTTTGTTTTTTGGGTTGTAGAGTTCTTGGTAATGTGGTTTTGGTAGGAAAGAAT
GAAACTTTATCGTTTGAAGACATTGAAGCTAATTTTGCTCCCTCAGTAAGAGGATCAGGC
AAATGCGGGATATTGTATGTGGCGGAGCCTTTAGATGCCTGCTCGACTTTGACCAACAAG
GTTGAACCAGTTAAAAATAGCACCCATGATCTGTTCTTGCTGATAATAAGGGGTGGATGT
AGTTTTGAAGATAAAGTCAGACAAGCCCAGGCGGCAGGTTCCAAGGCAGCCATTATCTAC
AACGATGAATACGGTGATCTAGTTGCAATGGCAGGAAACTCTGCTGGTGTACAGATACCC
GCGGTGTTTGTTTCTAGAGTTTCAGGGGAAAAAATGACAAAGTATGCTGGTGACATTGAT
GTTGAAGTATGGATAATCCCAAGCTTTGAGAACTCTGCCTGGTCCATCATGGCTATATCA
TTCATTTCGTTACTAGCTATGTCAGCAGTGCTTGCTACCTGTTTCTTTGTCCGTAGACAT
CGGATACGAAGAGACCGGCCTCGGGCCTCACGCTTTCGTGAATTTCATGGAATGAGTAGT
CATTTGGTGAAAGCTATGCCAAGCTTGATATTTACATCAGTTTTGGAGGATAATTGTACA
TCAGTAACATGTGCTATCTGTCTTGAAGACTATATTGTGGGAGACAAGCTTAGAATTCTT
CCTTGCAGGCACAAATTTCATGCTATGTGCGTTGATGCGTGGCTTACATCATGGAGAACG
TTTTGCCCCGTCTGTAAACGTGATGCAAGGACTAGCAATGGTGAGCCACCAGCATCAGAA
TCTACGCCATTGCTTTCTTCTAGTCTAGCTTCTTTATCTTCGTTGTCATCCCTAAGATCA
TCATTAGCTTCATCATCAGCAATACAAATAGGCCAAGGAGCATCCCGATCCCCTTCAGTT
TCTCGTCCTCAATCAATTTCTAGTACTCCTTATAATCATCAGTCGCTTCAGTCCTACCAT
CAGTCACCTCATCTTACTATAAGCCGCAGTTCACTTGACCTTCAAAATGCGTCTTCCCAG
AGATCTCGTGCATCTTATTTGATTTCCCCTCACTCATTGGGTTATCCTTCTTTATCTCCT
CTTAATTCAAGATACATGTCACCATATATTCCTAGTCCAGGAAATGCCTCGTCCAGTTAT
ATAGGCTCCTCAAGTCGGCATCCCAACCCACTGCGTCATAGTGAGTCAACTACTAGCTTT
TCGCCATTTGCTTCAGCTCAGTCTCTTCCGGGATGTGAGTCATGATGTGTCGTTTCTAGA
AAATCTGGGTTCAAGTCTGTACTACCCTTTTAACCAAAGATCAGTGAAGTTGGGTCAATT
TCACCTCAAATCACACCTAAAGACAAAGCAACAGCTTTGGAGATGCAGCTCTGGCATATG
TGCAGTCTGGAAAATGACGGGAAGCGCTGGATTTGTATATTATTAGTGTGACGCTTATGT
TATAGATTTGGTTTCTATATTGAGGTTTTTACTATTTTTATTTTGATGTTTTCACGAGTG
CACGCGCAAAGCGATGGGTGTTCATGCTGTATGCAGTAGTCCTTTTTTACATACCCTTCT
TGTTTAGTGCTATGGATGTTAACAGTCTCCATTTTCTAGATGGTTTAGGTCTTGTTAGTT
GAAATCTTTTTGCTTAGGGTTTGAGCTTCTATGTATAGATCATTGGCACACATGACTAAA
GCTTCTAGTTTGAATGTATTGGGTCAGTTGTAATCAGAGGATGAACACGTTTAACGTTTC
ACAATAAGGATGATGCCTTGGTCCCGACTCAAATTGATTGGAGTTGGTTATATGAATCTT
TACTAATCATATTTTCTTATTTAAATTGATCAACCCCCCCCCCCCCCAAGTGGCCAATGA
TTTCTGTTTATTTGGCCAATGTAAATATGAGGTTGATGGTTTTCATCTTTCGTCTCAATT
TGGATACAAGATCTTCACCAAAGAACAGCAATTTTCCAGCCATCATTACTGATTTT