Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g018610.2.1
CDS Infomation

Calcium-dependent protein kinase (AHRD V3.3 *** H6UM40_TOBAC)
Sequence

ATGGAGATCCCTAAATCTGAAAATAGCAAACCCCCAACAGTTTCATCATCAACAAAATCA
TGTATGAATGTTCTTCCATACCAAACCCCAAGAATAGGTGAGCATTATACTCTTGGGAAG
AAACTAGGGCAAGGTCAATTTGGTACAACTTATTTATGCACAGAGAATGCAACAGGTCTT
GAATATGCTTGTAAAACAATCCCAAAAAGGAAACTTTTTTGTAAAGAAGATTATGAGGAT
GTATGGAGAGAGATTCAGATAATGCATCATTTGTCTGAACACCCTTATGTTGTTAGGATC
AAAGGGACTTATGAGGATAATCTTTTTGTACATATTGTTATGGAGGTTTGTAAAGGGGGT
GAACTTTTTGATAGAATTGTTCAAAAGGGGCATTTTAGTGAGAAGAAAGCTGCACAATTG
ATGAAAACTATTGTAAAAGTTGTTGAGGCTTGTCATTCTCTTGGGGTTATGCATAGAGAT
CTAAAACCTGAGAATTTCCTTTTTGATAGCTCTGATGAAGATGCTAAGCTTAAGGCTACT
GATTTTGGTCTCTCTATTTTCTATAAGCCAGGGCAGTATTTCTCAGATGTTGTTGGAAGT
CCATATTATGTTGCTCCTGAAGTGTTGCACAAATACTATGGGCCTGAAATAGACGTCTGG
AGTGCTGGAGTCATCCTTTATATCTTGTTATGTGGAGTTCCTCCTTTCTGGGCTGAGACA
GACAATGGTATCTTCAAACAGATATTGAAAGGAAAGATAGACTTCGAATCAGAACCTTGG
CCTCAGATTTCTGATAGTGCAAAAGATTTGGTAAAAAAGATGCTCACCAGGGATCCTAGA
GCACGATTAACCGCGCATCAAGTTCTATGTCATCCTTGGATTGTGGATGATAATGTTGCT
CCGGACAGACCCTTGGGTTCTGCAGTTCTGTCGCGCCTAAAGCAGTTCTATGATATGAAC
AAACTTAAAAAGATGGCTTTACGAGTCATAGCAGAAAGGCTTTCAGAGGAAGAAATAGGC
GGCCTAAAGCAATTATTCAAAATGATTGACACAGACAACAGTGGAACAATCACATATGAG
GAACTAAAGCATGGTTTGAAAAGAGTAGGATCTGACTTAACAGAGTCCGAAATCAAGGCC
TTGATGAGCGCGGCTGACTTTGACAACAACGGCACTATCGACTATGGTGAATTCATCGCT
GCAACATTGCATTTGAACAAGATGGAGAGGGAGGAGAATCTGCTTGCTGCATTTTCCTAC
TTCGACAAGGATGGTAGTGGTTATATCACCATTGATGAGCTTCAACAAGCTTGCCAAGAG
TTTGGGTTAGGTGATGTTAAATTGGAGGATATTATCAAAGAGATTGATATAGACAATGAT
GGACGCATAGATTATGGGGAATTCGCAACTATGATGAAGAAGGGAAATACAGGACTAGCA
GCTAGAACAATGAGAGGCAATCTGACCTTCAATTTGGCAGATGCTCTTGGAGCCAGTGAC
AGTGACAATGGTCAATAG

Peptide Sequence

PEP ID

Solyc11g018610.2.1
PEP Infomation

Calcium-dependent protein kinase (AHRD V3.3 *** H6UM40_TOBAC)
Sequence

MEIPKSENSKPPTVSSSTKSCMNVLPYQTPRIGEHYTLGKKLGQGQFGTTYLCTENATGL
EYACKTIPKRKLFCKEDYEDVWREIQIMHHLSEHPYVVRIKGTYEDNLFVHIVMEVCKGG
ELFDRIVQKGHFSEKKAAQLMKTIVKVVEACHSLGVMHRDLKPENFLFDSSDEDAKLKAT
DFGLSIFYKPGQYFSDVVGSPYYVAPEVLHKYYGPEIDVWSAGVILYILLCGVPPFWAET
DNGIFKQILKGKIDFESEPWPQISDSAKDLVKKMLTRDPRARLTAHQVLCHPWIVDDNVA
PDRPLGSAVLSRLKQFYDMNKLKKMALRVIAERLSEEEIGGLKQLFKMIDTDNSGTITYE
ELKHGLKRVGSDLTESEIKALMSAADFDNNGTIDYGEFIAATLHLNKMEREENLLAAFSY
FDKDGSGYITIDELQQACQEFGLGDVKLEDIIKEIDIDNDGRIDYGEFATMMKKGNTGLA
ARTMRGNLTFNLADALGASDSDNGQ*

Transcript Sequence

Transcript ID

Solyc11g018610.2.1
Transcript Infomation

Calcium-dependent protein kinase (AHRD V3.3 *** H6UM40_TOBAC)
Sequence

AGAACAAACACAAATCCATAAATTTACAACTTGAGACACCCACCATATTATGAAACAAAA
ATCATCATTTACAACAAACGCAAATCCATAATTTTTCCTCAAAATCAACAACCAACATAC
TTTTTCCTTCCCAAGAATTATTTCTTTTTCAAAGATTAGAAAATAGAAGAAAAGATTGAA
TCTTGATTTGAAGAATCAGCAAAAATGGAGATCCCTAAATCTGAAAATAGCAAACCCCCA
ACAGTTTCATCATCAACAAAATCATGTATGAATGTTCTTCCATACCAAACCCCAAGAATA
GGTGAGCATTATACTCTTGGGAAGAAACTAGGGCAAGGTCAATTTGGTACAACTTATTTA
TGCACAGAGAATGCAACAGGTCTTGAATATGCTTGTAAAACAATCCCAAAAAGGAAACTT
TTTTGTAAAGAAGATTATGAGGATGTATGGAGAGAGATTCAGATAATGCATCATTTGTCT
GAACACCCTTATGTTGTTAGGATCAAAGGGACTTATGAGGATAATCTTTTTGTACATATT
GTTATGGAGGTTTGTAAAGGGGGTGAACTTTTTGATAGAATTGTTCAAAAGGGGCATTTT
AGTGAGAAGAAAGCTGCACAATTGATGAAAACTATTGTAAAAGTTGTTGAGGCTTGTCAT
TCTCTTGGGGTTATGCATAGAGATCTAAAACCTGAGAATTTCCTTTTTGATAGCTCTGAT
GAAGATGCTAAGCTTAAGGCTACTGATTTTGGTCTCTCTATTTTCTATAAGCCAGGGCAG
TATTTCTCAGATGTTGTTGGAAGTCCATATTATGTTGCTCCTGAAGTGTTGCACAAATAC
TATGGGCCTGAAATAGACGTCTGGAGTGCTGGAGTCATCCTTTATATCTTGTTATGTGGA
GTTCCTCCTTTCTGGGCTGAGACAGACAATGGTATCTTCAAACAGATATTGAAAGGAAAG
ATAGACTTCGAATCAGAACCTTGGCCTCAGATTTCTGATAGTGCAAAAGATTTGGTAAAA
AAGATGCTCACCAGGGATCCTAGAGCACGATTAACCGCGCATCAAGTTCTATGTCATCCT
TGGATTGTGGATGATAATGTTGCTCCGGACAGACCCTTGGGTTCTGCAGTTCTGTCGCGC
CTAAAGCAGTTCTATGATATGAACAAACTTAAAAAGATGGCTTTACGAGTCATAGCAGAA
AGGCTTTCAGAGGAAGAAATAGGCGGCCTAAAGCAATTATTCAAAATGATTGACACAGAC
AACAGTGGAACAATCACATATGAGGAACTAAAGCATGGTTTGAAAAGAGTAGGATCTGAC
TTAACAGAGTCCGAAATCAAGGCCTTGATGAGCGCGGCTGACTTTGACAACAACGGCACT
ATCGACTATGGTGAATTCATCGCTGCAACATTGCATTTGAACAAGATGGAGAGGGAGGAG
AATCTGCTTGCTGCATTTTCCTACTTCGACAAGGATGGTAGTGGTTATATCACCATTGAT
GAGCTTCAACAAGCTTGCCAAGAGTTTGGGTTAGGTGATGTTAAATTGGAGGATATTATC
AAAGAGATTGATATAGACAATGATGGACGCATAGATTATGGGGAATTCGCAACTATGATG
AAGAAGGGAAATACAGGACTAGCAGCTAGAACAATGAGAGGCAATCTGACCTTCAATTTG
GCAGATGCTCTTGGAGCCAGTGACAGTGACAATGGTCAATAGGAGATTTTTTGCATTTGT
ATAGCATCATCAATGTTAAATCCAATTTGTCAATGTAATTTTTTTAAAAAAATTCTTGTG
ATTCAGAAGCCTATATAGTTGGCTAAAGGACATAGTTATACAGATATTGTATTTTACGAA
TTAACTAAATTATTACACTTTTTTATCAAGGTAAATTGTAGTATGTGTTCCTCTTTTCAA
TTAGAGGACCTGTCCTTCAATTTGGAGAAGTTGGAATTCCTTTTCATGAACCTCTATGTA
ATGATGATCCACACATTTTATATGTGCAAACAACTATACTGGCCTTTAAAAATCAACTGT
GTAACATGTTTAAACAGCCATAAAATAAGCACTAGAGCAAATTCTTTCACTAGTTTTTTA
GAGTACAGTGAGTTCCTTGACCATTCACTATATTTCCCAGCTTAGTGTTTTTTTGACAAT
TGTGTAGATGAAATTGACGAAAAACAATTCATTAGAAGAGCTTGCGACACTGCATTCATC
TTTGAAGGGAATTGTAATAACAATATTATCGTGTTACCTATCACCTTTGTTTTCAACCGA
TTACAGGGAGTAATCTAGTTAATATAAGAAAAGGGCAAAGAACACAGTATGGAACACTTC
TCAGCCCTTGTGATTGCCTCAGGCAAATCTGTCAGTCACTTGAAAATGCCTTCTTCATTG
TGAGTCAGGTACTGGAAAATGAAGGGCTGTTACCTCAATCCTGCCGGCTGCCACTCCAAT
TTGCAGTGAAGTCATAATAAAGAAATCTTCAAGTCCCTTTACAAGGTACAATCTGTTGGT
CCTTCAA