Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g018530.2.1
CDS Infomation

root-specific metal transporter
Sequence

ATGGAGAATCAACAGCAAAATCAAGTGATTGGAGGTAGCAAGAGAATTGTAGCACTAAAT
GAGAGTCCATTACCTTCTAATAATGATCATCATATTGAGCATCAGAAACATGGCTGGAAA
AACTTTTTTGCATATGTGGGGCCAGGTTTTCTTGTTTCCTTGGCATATCTTGATCCCGGA
AACTTGGAAACTGATTTGCAAGCAGGAGCAAACCATAGATATGAGCTTCTTTGGGTGATC
CTCATTGGATTGATATTTGCTCTTATTATTCAATCACTTGCTGCTAATCTTGGAGTAAGC
ACTGGGAAACATTTATCAGAATTATGCAGGGCTGAATATCCAGTATTTGTTAAGTACTGC
CTATGGTTGCTAGCTGAAGTTGCTGTCATAGCTGCAGATATTCCTGAAGTGATTGGGACA
GCATTTGCTCTTAATATATTGTTCCATATTCCTGTTTGGGCTGGAGTTCTTTGCACTGGT
GTTAGTACTCTTCTATTCATTGGCCTGCAGAGATATGGGGTTAGGAAGTTAGAATTGTTA
ATAGCAATTCTAGTATTTGTAATGGCAGCTTGTTTCTTTGGGGAAATGAGTTATGTAAAA
CCTCCTGCTAATGAATTATTCAAAGGAATGTTCATTCCTAAGCTCAACGGTGACGGAGCC
ACCGCTGATGCTATCGCCTTGTTGGGCGCCCTTGTTATGCCACACAATCTCTTCCTTCAC
TCTGCCCTTGTACTATCTAGGAAGATACCTAACTCGGTTCGTGGCATTAATGATGCATGT
AAATTCTTCTTGATAGAGAGCGGTTTCGCGTTGTTTGTGTCCTTCCTAATCAATGTGGCA
GTTGTGTCTGTGTCTGGTACTGTTTGTGGAGCTGACAATCTTTCAGATCAGAATAAAGAA
AGTTGTAGTGACATTACATTGAACTCTGCTTCTTTTCTTCTCAAGAATGTACTTGGAAAA
TCAAGTTCTACTGTTTATGCCATTGCATTATTAGCCTCAGGACAAAGCTCTACCATTACT
GGTACTTATGCTGGCCAATTTATCATGCAAGGATTTTTGGATCTTAAAATGAAGACGTGG
TTAAGGAACTTGTTTACTAGACTTATTGCTATTACTCCAAGCCTTGTTGTTTCAATTATT
GGAGGATCGTCAGGAGCGGGAAGACTAATCATCATTGCTTCTATGATACTTTCCTTTGAA
CTTCCATTTGCACTCATTCCACTACTCAAATTCAGCAGTAGCTCCACTAAGTTGGGACCA
CACAAGAACTCAATTTATATTATCGTGATCTCGTGGATTCTTGGACTAGGCATCATTGGG
ATCAACATCTACTACCTTAGCACAGCTTTCGTGGGTTGGCTGATAAGCAACAATTTGCCT
AAAGTTGGAAATGTATTGATTGGGATCGTAGTATTTCCATTGATGGCTATATATATTCTA
GCTGTGATATACCTTATGTTTCGAAAAGATAAAGTTGTGACCTACATTGATCCAATCAAG
GATGATCATATGGAAAATGGAATAAACAGTATGGAATTAGTAGATCGTGTGCCTTATAGA
GAGGATCTTGCTGATATTCCATTGCCACAATAA

Peptide Sequence

PEP ID

Solyc11g018530.2.1
PEP Infomation

root-specific metal transporter
Sequence

MENQQQNQVIGGSKRIVALNESPLPSNNDHHIEHQKHGWKNFFAYVGPGFLVSLAYLDPG
NLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVSTGKHLSELCRAEYPVFVKYC
LWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVLCTGVSTLLFIGLQRYGVRKLELL
IAILVFVMAACFFGEMSYVKPPANELFKGMFIPKLNGDGATADAIALLGALVMPHNLFLH
SALVLSRKIPNSVRGINDACKFFLIESGFALFVSFLINVAVVSVSGTVCGADNLSDQNKE
SCSDITLNSASFLLKNVLGKSSSTVYAIALLASGQSSTITGTYAGQFIMQGFLDLKMKTW
LRNLFTRLIAITPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKLGP
HKNSIYIIVISWILGLGIIGINIYYLSTAFVGWLISNNLPKVGNVLIGIVVFPLMAIYIL
AVIYLMFRKDKVVTYIDPIKDDHMENGINSMELVDRVPYREDLADIPLPQ*

Transcript Sequence

Transcript ID

Solyc11g018530.2.1
Transcript Infomation

root-specific metal transporter
Sequence

AGACTTAATTTTATCGTAATAATATATATCACCTCCCACCCACCAAAAAAATATTTTAAA
AAAAAATCCATAGTTTTCCTTGCCTTCTCAATTACCTGACATCAGAACAAGAATGTGTTC
AAACTAGTACACTATAAATAAGGAGACAAATCTAAGTCTTACATAAGTAAACACAAAGAG
TTTAGTAGTCAAAGTGAGTAAAAAGGAGAAAAAGAAATGGAGAATCAACAGCAAAATCAA
GTGATTGGAGGTAGCAAGAGAATTGTAGCACTAAATGAGAGTCCATTACCTTCTAATAAT
GATCATCATATTGAGCATCAGAAACATGGCTGGAAAAACTTTTTTGCATATGTGGGGCCA
GGTTTTCTTGTTTCCTTGGCATATCTTGATCCCGGAAACTTGGAAACTGATTTGCAAGCA
GGAGCAAACCATAGATATGAGCTTCTTTGGGTGATCCTCATTGGATTGATATTTGCTCTT
ATTATTCAATCACTTGCTGCTAATCTTGGAGTAAGCACTGGGAAACATTTATCAGAATTA
TGCAGGGCTGAATATCCAGTATTTGTTAAGTACTGCCTATGGTTGCTAGCTGAAGTTGCT
GTCATAGCTGCAGATATTCCTGAAGTGATTGGGACAGCATTTGCTCTTAATATATTGTTC
CATATTCCTGTTTGGGCTGGAGTTCTTTGCACTGGTGTTAGTACTCTTCTATTCATTGGC
CTGCAGAGATATGGGGTTAGGAAGTTAGAATTGTTAATAGCAATTCTAGTATTTGTAATG
GCAGCTTGTTTCTTTGGGGAAATGAGTTATGTAAAACCTCCTGCTAATGAATTATTCAAA
GGAATGTTCATTCCTAAGCTCAACGGTGACGGAGCCACCGCTGATGCTATCGCCTTGTTG
GGCGCCCTTGTTATGCCACACAATCTCTTCCTTCACTCTGCCCTTGTACTATCTAGGAAG
ATACCTAACTCGGTTCGTGGCATTAATGATGCATGTAAATTCTTCTTGATAGAGAGCGGT
TTCGCGTTGTTTGTGTCCTTCCTAATCAATGTGGCAGTTGTGTCTGTGTCTGGTACTGTT
TGTGGAGCTGACAATCTTTCAGATCAGAATAAAGAAAGTTGTAGTGACATTACATTGAAC
TCTGCTTCTTTTCTTCTCAAGAATGTACTTGGAAAATCAAGTTCTACTGTTTATGCCATT
GCATTATTAGCCTCAGGACAAAGCTCTACCATTACTGGTACTTATGCTGGCCAATTTATC
ATGCAAGGATTTTTGGATCTTAAAATGAAGACGTGGTTAAGGAACTTGTTTACTAGACTT
ATTGCTATTACTCCAAGCCTTGTTGTTTCAATTATTGGAGGATCGTCAGGAGCGGGAAGA
CTAATCATCATTGCTTCTATGATACTTTCCTTTGAACTTCCATTTGCACTCATTCCACTA
CTCAAATTCAGCAGTAGCTCCACTAAGTTGGGACCACACAAGAACTCAATTTATATTATC
GTGATCTCGTGGATTCTTGGACTAGGCATCATTGGGATCAACATCTACTACCTTAGCACA
GCTTTCGTGGGTTGGCTGATAAGCAACAATTTGCCTAAAGTTGGAAATGTATTGATTGGG
ATCGTAGTATTTCCATTGATGGCTATATATATTCTAGCTGTGATATACCTTATGTTTCGA
AAAGATAAAGTTGTGACCTACATTGATCCAATCAAGGATGATCATATGGAAAATGGAATA
AACAGTATGGAATTAGTAGATCGTGTGCCTTATAGAGAGGATCTTGCTGATATTCCATTG
CCACAATAAGGTTTTTTTTCATTTGTTGTAATACACTTCAATTTTCACTCTTA