Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g017400.2.1
CDS Infomation

N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (AHRD V3.3 *** AT3G58130.2)
Sequence

ATGGAGTGGCTAGTAATCATCGTTACAGTGGTTGTGCTGTGGGTGGCTTCACTCTTTAAA
ATTCTTCACGAATCTCTCTCTGCCTCACAAGTTAAAGTTTTGAATGATGGTGGGGTTTTT
TGCAAGAGAAACGTGTTGTTGATTATTGCCCATCCGGATGATGAGTCTATGTTCTTTACT
CCAACCATTAATTATTTGTCTTCAAGAGGATGTAATTTGCACATATTATGCATGTCAAAA
GGTAATGCAGATGGTATAGGCGATGTCAGAAAAGAAGAACTTTATTTAGCCTCGGTTGTG
CTTAAGGTTCCACAAAAGCAAGTGAAAGTCCTTGACCATCCAGATCTACAGGATGGTTTT
GGCAAATCATGGAACTCTAAGTTACTGTCAAAGATTATCAAGGAGGAAATTGTCAATTGT
GCAATTGATTTGGTCATAACTTTTGATAATTATGGAGTCTCAGGTCACTGTAACCATCAA
GATGTTCATCAAGGTGTACGAAAACTATTGCAAGATACTTCACATAAAGAAGTTGAGGCC
TGGGAGCTTGTTAGCACTAGCATATTGCGCAAGTACAGTGGACCAGTTGACATATGGTTG
TCCCTCCTATCTGCCAAGTTCCATTTTAGTGGAGTGGCACATTGCTTTCTAAACGTACAT
CCCGGAAGGAGCTTAGCTGCAATGGCTCAGCACAGGAGTCAGTGGGTTTGGTTTCGCAAG
CTATTTGTTTCTTTCTCAAGTTACACATACGTTAACTGCGTTAGGAAGATCAACTAG

Peptide Sequence

PEP ID

Solyc11g017400.2.1
PEP Infomation

N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (AHRD V3.3 *** AT3G58130.2)
Sequence

MEWLVIIVTVVVLWVASLFKILHESLSASQVKVLNDGGVFCKRNVLLIIAHPDDESMFFT
PTINYLSSRGCNLHILCMSKGNADGIGDVRKEELYLASVVLKVPQKQVKVLDHPDLQDGF
GKSWNSKLLSKIIKEEIVNCAIDLVITFDNYGVSGHCNHQDVHQGVRKLLQDTSHKEVEA
WELVSTSILRKYSGPVDIWLSLLSAKFHFSGVAHCFLNVHPGRSLAAMAQHRSQWVWFRK
LFVSFSSYTYVNCVRKIN*

Transcript Sequence

Transcript ID

Solyc11g017400.2.1
Transcript Infomation

N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein (AHRD V3.3 *** AT3G58130.2)
Sequence

TTTTCTGTATGCTTTCCAACAGGTAGTGTGATGCACGACATAGTGCTTCAAATCCTAGGT
CTGTTTGACTAGACTAGACTCTTGTTAGTAAAAGAACAAGAAAAGCAAAAGCAAAGAAAC
TAATGGCTTAGAATACCTTGGGTTTTATGGAAATGCATACATATACCAAAGTTTAACTAT
CGTTTTGAACTATAACAGAGTCCTCAAACATGCACAGCATTCTTTCAGCCATTTCTCAAA
CAATTCCAATGCAAATTGTAGTAAACCAAATGTAATATCATGGAAGGCAAAAAAAAACCA
TCTTTTCACATTTTTCAGGATTTAAATAAATTAAACTCATACTCAACTATGGAAGTAAAG
CTAAACACTTGAAAAGAGAGCATTTCGTATGGTAGAAAGAAATCGGAATATACACAGATG
TATATCTGATTCAAGATGTAGAACATGAAATTTAATTCTTGTTTGGAGCCTATTGAGGAT
AATAAGTAAGAAGATATTCAAATTGAAGTCATTTAAAGCTCCATAACCAATTAAAACCTT
AACGAAGCATGTAAACTGAAACAACCCAAGAACCAATTATGGGTGACAGCTCATTGAATG
TCTCACATTTGTGGGGTTGTATAAGGTGAAAGACCAAATTAAATTGGATATATGTTGTAG
GGAACAAATAAGATATATGTGAGCATCAAAGGAGTATAAATTGATGGAGCAAGTCTACTA
AAGTTAGTACATAAGTGATGGATTGAAGGGTGAATCTTTAGTAATCCTTTGCATCTTAAT
TTGGTCACATATTTGAGGAAGCATTGGAGCATATCTATTAGTATAGCTGTTGCCTCTGTT
CTTGTTGGACAACATGATATAGGAAAAGATGTAATACTGGAATATGGAATGACTTCGAAG
TGGAAAGACAGCTGAACACTTGGCTTTAGATCAGTCATGTGAAGGATTGAATCGTTACTT
ATATTTGATGGGATTTATTAGCCAAGACCACTGCTGTGGGTAGGGGGAATTATGAACAAT
CTTATTTTTGAATTTTACTTAGGGATACCAGGTGGGGGGGTGTGCCTATTACTCCCTATT
TTATGAAAGGAATGATATGTTGGGACCAAGACGGTGTAAATGATAGCAAGACAAGGACCC
CAAACACTATTTATAAAGGAGAAATCAAGTCTTTTGCTGGGTAAAGATAGGGAGGTATGA
AGGAGAGAAGCTCTTTGGCTCTCCATTTCATTTTCTGTATAAAGAGAACCTCGAAAGGGG
AAATAGAAACCAAGCAGCTACTTGGTTATTTGGAAAAATCACAGCTCTCCTGTGGCTTCA
CGGGAACTCTCCACACCACTCATTTAAATGGGTAATTTTGGTCTGCTGGTAAAAAAGTTA
AATGGAGTGGCTAGTAATCATCGTTACAGTGGTTGTGCTGTGGGTGGCTTCACTCTTTAA
AATTCTTCACGAATCTCTCTCTGCCTCACAAGTTAAAGTTTTGAATGATGGTGGGGTTTT
TTGCAAGAGAAACGTGTTGTTGATTATTGCCCATCCGGATGATGAGTCTATGTTCTTTAC
TCCAACCATTAATTATTTGTCTTCAAGAGGATGTAATTTGCACATATTATGCATGTCAAA
AGGTAATGCAGATGGTATAGGCGATGTCAGAAAAGAAGAACTTTATTTAGCCTCGGTTGT
GCTTAAGGTTCCACAAAAGCAAGTGAAAGTCCTTGACCATCCAGATCTACAGGATGGTTT
TGGCAAATCATGGAACTCTAAGTTACTGTCAAAGATTATCAAGGAGGAAATTGTCAATTG
TGCAATTGATTTGGTCATAACTTTTGATAATTATGGAGTCTCAGGTCACTGTAACCATCA
AGATGTTCATCAAGGTGTACGAAAACTATTGCAAGATACTTCACATAAAGAAGTTGAGGC
CTGGGAGCTTGTTAGCACTAGCATATTGCGCAAGTACAGTGGACCAGTTGACATATGGTT
GTCCCTCCTATCTGCCAAGTTCCATTTTAGTGGAGTGGCACATTGCTTTCTAAACGTACA
TCCCGGAAGGAGCTTAGCTGCAATGGCTCAGCACAGGAGTCAGTGGGTTTGGTTTCGCAA
GCTATTTGTTTCTTTCTCAAGTTACACATACGTTAACTGCGTTAGGAAGATCAACTAGAT
ACATGTTAAGAGTCGTTGGTTCAGGAAGACACTTGAAAGGAAGATCGACTAGACTAGACG
TTAGTTTGGTCCAACAACACTTGAAATGGCAATGTTGTTGATAGGATTTGTTGCAAGTAC
TCTTCTCCAATTAAGTCATTCAAGGACTCAGTTAATGAACTTGCCACTGAATTTCAAAGG
AAATATTACAAAGATGGAGAAAGGGGAGTAATAAGATTTTATGAGTATGAAGAAATGGAG
AAGGCAATAGTGGAAGCAAAAGAAAAGTTTAAAAGTGGATATGAAGAAGAAGAAATAAAG
AGAATTAAAGATGTTATTTTTCAGAAATCTATAGCTCTAAAGCCTGGTTTGGAGAAGTTT
GAATTACAAGTTGATCAAGTATTTGAAGAGGTGCTAAAAGGAAGGAATAAATTGCTCCAA
ATGGTTGGTAAAGCCAATGGAATTTTTAGATAAGTCATACTTTACTTCTTGTATATATTT
CTTCTTCATTTTTTTTCAAGGGCAGAGTTGGTTAATATATATATATATATGGTCCACTTT
ATATGACATTATCATCGTAACTTTCTAATTAACTATTAATTATATAATATAACTGAACTC
CATGTGCCACAATTTATATATCAATTCTTAATTTGCCACAATTTATATATCAATTC