Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g017370.2.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A172CHJ1_POPTO)
Sequence	ATGCCTGAAATCCTAGAGTTTATAAATGATTTTCTACCCCTTTTCAACCTACGTGACAAA CGTACTCACAAACTCTCTCTCACTCTTCCTCTCCTCCCTCTCACTTCTCTCCCACTCTCT GACCTCTCTCCTCTCAAAATTCTGTTCAAGAAGTCTTCTTCTTCACTCCCAAATTTCTCT TCTTTACCCCTTACAGACCAACAATGCACTCTTACAGACTCAAAACCCAGAACAATTCGC TTTCGTTTAAGCGAATTATGCAGACAAGGCCAACCCCATCTCGCCCGCCAACTGTTCGAT ACAATTCCTCAACCATCAACTGTCCTTTGGAACACAATTATCATTGGGTTTGTCTGTAAC AACATGCCCCATGAAGCCATTTCATTCTACTCTCGATTGAAACATGTGGGTTCATCCGTA TGTGATCAGTATACTTATTCCTCTGTTCTCAAGGCTTGCGCAGAGACCAAACTGATTCGT GTAGGTAAAGCTGTGCATTGCCACATTCTGCGTTCTGGGATTCATCCTAGTAGGATTGTT AGTAATTCTTTGTTGAATATGTACTCTGCGACTTGTCTTACATTGAATAATGGTTCCGAG TGTGATTTAGTTGAAAGGGTGTTTAGAACTATGCGTAAAAGAAATGTTGTTGCGTGGAAT ACTATTTTTTCATGGTATGTGAAAAGGAAGACGTTTTCGGAAGCAGTGAGGTGTTTTGTT ATGATGATGAAATTAGGCATTAAGCCAACTGTTGTTAGTTTTATTAATGTTTTTCCTGCT GTATCAGAAATAGGGGATGTTAGAGTTGCTGACGTTCTTTATGGATTGCTTGTGAAATTG GGTAATGCATATGTAAATGACATGTTTGTTGTTAGTGCTGCCATTGTTATGTATGCTGAG CTTGGTTGCGTTGATTTCGCGACCAGAATATTTGAGAATACTTGTGAAAGAAATACAGAG ATCTGGAACTCTATGATTAGCGGGTACATTCAGAATAATTTTCCTTTAAAAGCTGTTGAT CTCTTTCTTGAAGCTGTAGAAGCAGAGGATGCTGTTACTACTGATGATGTGACATTTGTA TCCGCTCTTATGGCAACTTCACAGTTGCAGCATTTGGAGTTTGCCCAACAGCTACATGCA TGTCTGATCAAGAAATATAGGGATTCACAGGTTATTTCGCTTAATGCTATGATAGCCACA TACTCTAGGTGTAACCATGTTGGCGATTCATTTAAAGTTTTTAACGGAATGAAGGAAAGA GATATAGTGTCATGGAACACCATGGTGTCTGCTTTGGTACAGAACGGACTGGATGATGAG GCTTTGATGCTTGTATATGAGATGCAAAAGCTTGGGGTTGCAATTGATGATATAACAATT ACCATCCTGCTTTCTGCGGCATCAAATCTTAGGGACAGGGAAATTGGTAAACAGACCCAT GCTTATCTTCTAAGGCACAATATTCAATTTGAAGGGATGGAGAGTTACCTGATAGACATG TATGCCAAATCTAATATGATTAGAGAAGCACAAGCAATATTCCAGTCGAACTTCACAAAT GATAAAGATCAAGCGACGTGGAATGCTATGATTGCTGGAAACACTCAAAATGGATTAATT GAACAATCCTTTGTTGTCTTCAAGGATATGCTAGAGCAGAATGTGAAGCCAAATGCTGTG ACCTTAGCATCAATCCTCCCATCATGCAGCCAGTCAGGAAGTATAGCAATAGGCAAGCAG CTACATTGTTTTGCGATTCGCAATTTGTTTGAGAACAATGTTTATGTTGTTTCTGCTTTG GTAGACATGTATTCAAAATCAGGAATCATTGATTATGCGGAAAGTGTTTTTCTAAAATCT ACTGAGAAGAACTCTGTGACATATACAAATATGATTTTGGGATATGGCCAGCATGGGATG GGTAGGAAAGCTCTAACACTGTTCTACTCTTTGAGGCAGAATGGCTTAGAGCCAGATGCT GTTACTTTTGTAGCAGTCCTGTCTGCTTGCAGCTACACCGGATTGGTAGATGAAGGCCTT CAAATATTTGAGCTGATGGGCAAAGAATACGGGATTCAGCCGTCGGCAGAGCACTATGCT TGTGTGGTTGACATGTTAGGAAGAGTTGGACGGTTGAATGAAGCTCATAATTTTGCTAAA CAGTTGGGTGTTGAGGGTAATGTCCTGGGAATATGGGGATCACTCCTTGCAGCCTGCAGA GTACACAGAAATTTTGAATTGGGGAAAATTGTTTCCAGTAAGCTGCTTGAATTAGAGGGG AGTGATGAAATTTCTGGTTATCATGTTCTGCTCTCAAATATATATGCAGAGGAAGGAAAC TGGCAGTCTGTAGATGATGTCAGAAGAGGAATGCGCAAAATGGGATTGTCAAAGGAGATT GGGTGTAGTTGGATTGATACTTCTGGATATCCACACTGTTTTGTATCTAAAGATAAGAAG CATCCTCAGTTCTGCATGATATATGATATGTTGGAATATTTAACCATCAATATGAAGGAT GTTGGCTATAAGCCTAAACTTGAACTAATAGAAGAGTGGATCTATGGGATAGAAGAATAA

Peptide Sequence

PEP ID	Solyc11g017370.2.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A172CHJ1_POPTO)
Sequence	MPEILEFINDFLPLFNLRDKRTHKLSLTLPLLPLTSLPLSDLSPLKILFKKSSSSLPNFS SLPLTDQQCTLTDSKPRTIRFRLSELCRQGQPHLARQLFDTIPQPSTVLWNTIIIGFVCN NMPHEAISFYSRLKHVGSSVCDQYTYSSVLKACAETKLIRVGKAVHCHILRSGIHPSRIV SNSLLNMYSATCLTLNNGSECDLVERVFRTMRKRNVVAWNTIFSWYVKRKTFSEAVRCFV MMMKLGIKPTVVSFINVFPAVSEIGDVRVADVLYGLLVKLGNAYVNDMFVVSAAIVMYAE LGCVDFATRIFENTCERNTEIWNSMISGYIQNNFPLKAVDLFLEAVEAEDAVTTDDVTFV SALMATSQLQHLEFAQQLHACLIKKYRDSQVISLNAMIATYSRCNHVGDSFKVFNGMKER DIVSWNTMVSALVQNGLDDEALMLVYEMQKLGVAIDDITITILLSAASNLRDREIGKQTH AYLLRHNIQFEGMESYLIDMYAKSNMIREAQAIFQSNFTNDKDQATWNAMIAGNTQNGLI EQSFVVFKDMLEQNVKPNAVTLASILPSCSQSGSIAIGKQLHCFAIRNLFENNVYVVSAL VDMYSKSGIIDYAESVFLKSTEKNSVTYTNMILGYGQHGMGRKALTLFYSLRQNGLEPDA VTFVAVLSACSYTGLVDEGLQIFELMGKEYGIQPSAEHYACVVDMLGRVGRLNEAHNFAK QLGVEGNVLGIWGSLLAACRVHRNFELGKIVSSKLLELEGSDEISGYHVLLSNIYAEEGN WQSVDDVRRGMRKMGLSKEIGCSWIDTSGYPHCFVSKDKKHPQFCMIYDMLEYLTINMKD VGYKPKLELIEEWIYGIEE*

Transcript Sequence

Transcript ID	Solyc11g017370.2.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A172CHJ1_POPTO)
Sequence	ATGCCTGAAATCCTAGAGTTTATAAATGATTTTCTACCCCTTTTCAACCTACGTGACAAA CGTACTCACAAACTCTCTCTCACTCTTCCTCTCCTCCCTCTCACTTCTCTCCCACTCTCT GACCTCTCTCCTCTCAAAATTCTGTTCAAGAAGTCTTCTTCTTCACTCCCAAATTTCTCT TCTTTACCCCTTACAGACCAACAATGCACTCTTACAGACTCAAAACCCAGAACAATTCGC TTTCGTTTAAGCGAATTATGCAGACAAGGCCAACCCCATCTCGCCCGCCAACTGTTCGAT ACAATTCCTCAACCATCAACTGTCCTTTGGAACACAATTATCATTGGGTTTGTCTGTAAC AACATGCCCCATGAAGCCATTTCATTCTACTCTCGATTGAAACATGTGGGTTCATCCGTA TGTGATCAGTATACTTATTCCTCTGTTCTCAAGGCTTGCGCAGAGACCAAACTGATTCGT GTAGGTAAAGCTGTGCATTGCCACATTCTGCGTTCTGGGATTCATCCTAGTAGGATTGTT AGTAATTCTTTGTTGAATATGTACTCTGCGACTTGTCTTACATTGAATAATGGTTCCGAG TGTGATTTAGTTGAAAGGGTGTTTAGAACTATGCGTAAAAGAAATGTTGTTGCGTGGAAT ACTATTTTTTCATGGTATGTGAAAAGGAAGACGTTTTCGGAAGCAGTGAGGTGTTTTGTT ATGATGATGAAATTAGGCATTAAGCCAACTGTTGTTAGTTTTATTAATGTTTTTCCTGCT GTATCAGAAATAGGGGATGTTAGAGTTGCTGACGTTCTTTATGGATTGCTTGTGAAATTG GGTAATGCATATGTAAATGACATGTTTGTTGTTAGTGCTGCCATTGTTATGTATGCTGAG CTTGGTTGCGTTGATTTCGCGACCAGAATATTTGAGAATACTTGTGAAAGAAATACAGAG ATCTGGAACTCTATGATTAGCGGGTACATTCAGAATAATTTTCCTTTAAAAGCTGTTGAT CTCTTTCTTGAAGCTGTAGAAGCAGAGGATGCTGTTACTACTGATGATGTGACATTTGTA TCCGCTCTTATGGCAACTTCACAGTTGCAGCATTTGGAGTTTGCCCAACAGCTACATGCA TGTCTGATCAAGAAATATAGGGATTCACAGGTTATTTCGCTTAATGCTATGATAGCCACA TACTCTAGGTGTAACCATGTTGGCGATTCATTTAAAGTTTTTAACGGAATGAAGGAAAGA GATATAGTGTCATGGAACACCATGGTGTCTGCTTTGGTACAGAACGGACTGGATGATGAG GCTTTGATGCTTGTATATGAGATGCAAAAGCTTGGGGTTGCAATTGATGATATAACAATT ACCATCCTGCTTTCTGCGGCATCAAATCTTAGGGACAGGGAAATTGGTAAACAGACCCAT GCTTATCTTCTAAGGCACAATATTCAATTTGAAGGGATGGAGAGTTACCTGATAGACATG TATGCCAAATCTAATATGATTAGAGAAGCACAAGCAATATTCCAGTCGAACTTCACAAAT GATAAAGATCAAGCGACGTGGAATGCTATGATTGCTGGAAACACTCAAAATGGATTAATT GAACAATCCTTTGTTGTCTTCAAGGATATGCTAGAGCAGAATGTGAAGCCAAATGCTGTG ACCTTAGCATCAATCCTCCCATCATGCAGCCAGTCAGGAAGTATAGCAATAGGCAAGCAG CTACATTGTTTTGCGATTCGCAATTTGTTTGAGAACAATGTTTATGTTGTTTCTGCTTTG GTAGACATGTATTCAAAATCAGGAATCATTGATTATGCGGAAAGTGTTTTTCTAAAATCT ACTGAGAAGAACTCTGTGACATATACAAATATGATTTTGGGATATGGCCAGCATGGGATG GGTAGGAAAGCTCTAACACTGTTCTACTCTTTGAGGCAGAATGGCTTAGAGCCAGATGCT GTTACTTTTGTAGCAGTCCTGTCTGCTTGCAGCTACACCGGATTGGTAGATGAAGGCCTT CAAATATTTGAGCTGATGGGCAAAGAATACGGGATTCAGCCGTCGGCAGAGCACTATGCT TGTGTGGTTGACATGTTAGGAAGAGTTGGACGGTTGAATGAAGCTCATAATTTTGCTAAA CAGTTGGGTGTTGAGGGTAATGTCCTGGGAATATGGGGATCACTCCTTGCAGCCTGCAGA GTACACAGAAATTTTGAATTGGGGAAAATTGTTTCCAGTAAGCTGCTTGAATTAGAGGGG AGTGATGAAATTTCTGGTTATCATGTTCTGCTCTCAAATATATATGCAGAGGAAGGAAAC TGGCAGTCTGTAGATGATGTCAGAAGAGGAATGCGCAAAATGGGATTGTCAAAGGAGATT GGGTGTAGTTGGATTGATACTTCTGGATATCCACACTGTTTTGTATCTAAAGATAAGAAG CATCCTCAGTTCTGCATGATATATGATATGTTGGAATATTTAACCATCAATATGAAGGAT GTTGGCTATAAGCCTAAACTTGAACTAATAGAAGAGTGGATCTATGGGATAGAAGAATAA