Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g013270.2.1
CDS Infomation	O-fucosyltransferase family protein (AHRD V3.3 *** AT1G38131.1)
Sequence	ATGTCTTCGAAAAGTGTTAATGGCGGTTGCACCATTAACAACACCTCCCCGCCGACATCT CCGCGTAACCGGCAAAATTGCCGGAGAAGACTACGCCGGCGGGGAAGCTTTTCAATGTTG CACCGGCGGTATTTTTTACTGCTTGTCTCTGTTCTATACTTTACAGGTCTGATCAGCTGC GTTGGTCCTCTGTTTTCTCTGCTGCAATTTTCTGGTTTAGCAAATGGTGCTGTTTATCGG AGTCATGAGATTTTTCAGAAGCTTTGGAATGATATTGAAGCTGATAATTCTTCTTCAATA GAGCTGTCCTCTGTGTGGATATACAAAAGGAAGCTAAAAGAGCAAAGACCCTGTTCCTTT GGTACTACTGCCTCAACTAAAGATTCTTCGAGAGCCAATCTTTACTTAATTGTTGATGCC AATGGTGGCCTCAATCAACAGCGATCATCGATTTGCAATGCAGTAGTCATTGCTGCGCTA TTGAATGCCACATTACTTATTCCTCGTCTGGAGTTTCACAATGTCTGGAGGGATTCGAGT GAATTTGGTGATATTTATGATGAAGACCATTTCATGTCCACCCTTAAAGATTATGTAGAA GTGGTTAAAGAACTACCATCAGAAGTGATGGAGAAATATGATTCTAATATCAGCAACATT CAGAATTTGCGAGTTCAAGCTTGGGCACCTCCAAGATATTACCTGGAAGAGGTTTATCCT GTCTTATTTAAGCAGCGGGTTGTTCGTATTTCCCCCTTTGCTAATAGATTGTCAATGCAT CTTCCATCTCATCTTCAGTTCCTGAGATGCTTTTCTAATTATGAAGCTTTAAAGTTCTCT CCAGCCATATCAGAACTTGCAAAGAAGTTGGTCAAGCGTATGATTGAGAGGAGCTCTAAC GCTGGTGGGAAGTATATTTCTATACACCTTCGCTTTGAGGAGGATATGGTAGCCTTTTCG TGCTGTATTTATGACGGAGGACAGGTTGAGAAGTCAGAAATGGACGTTGTACGTGAGAAA GGATGGGGAAAGAAGTTCAAACAGAAATATCGCGTTATTGCACCTGGTCTCAACCGTAAA AATGGAAAATGTCCTATGACCCCTGTAGAGGTTGGCATGATGCTCAGGGGTATGGGATTT GCCAAAGACACTCCGATATATTTGGCTTCTGGGAAGATTTACCAGGCAGATAGATATCTA GAACCTCTGCGGAAGATGTTTCCCCTCCTACAAACCAAGGAGACCTTGGCAACCAAAGAT GAACTTGCGCCATTTGAGGGTTATTCATCAAGACTAGCCGCTGTGGACTACCTAGTATGC TTGTTTAGTGAAGTATTTGTAACCACTCAAGGGGGAAACTTCCCTCATTTTTTGATCGGT CATAGAAGGTACCTTTTCAATGGACATGCCAAGACTATCAAACCTGATAAAATCAAGCTT GTAACTTTATTGCAAAACACAAGTACAAGCTGGATTGATTTCAAGGATCAAATGGGATCA ATGTTGGCTGAAAGTGATCGGAAGGGCATAATGGTACCTAGAGTTAAGAAGTCTACCAGA AAAGGTTCTATCTATTCGAATCCTTTGCCTGAATGCAGGTGTCTTTGGGAGTCAAAAAGA ACTACCAACCGTAGTAATTCATACCTCATGGTAGATCACTGA

Peptide Sequence

PEP ID	Solyc11g013270.2.1
PEP Infomation	O-fucosyltransferase family protein (AHRD V3.3 *** AT1G38131.1)
Sequence	MSSKSVNGGCTINNTSPPTSPRNRQNCRRRLRRRGSFSMLHRRYFLLLVSVLYFTGLISC VGPLFSLLQFSGLANGAVYRSHEIFQKLWNDIEADNSSSIELSSVWIYKRKLKEQRPCSF GTTASTKDSSRANLYLIVDANGGLNQQRSSICNAVVIAALLNATLLIPRLEFHNVWRDSS EFGDIYDEDHFMSTLKDYVEVVKELPSEVMEKYDSNISNIQNLRVQAWAPPRYYLEEVYP VLFKQRVVRISPFANRLSMHLPSHLQFLRCFSNYEALKFSPAISELAKKLVKRMIERSSN AGGKYISIHLRFEEDMVAFSCCIYDGGQVEKSEMDVVREKGWGKKFKQKYRVIAPGLNRK NGKCPMTPVEVGMMLRGMGFAKDTPIYLASGKIYQADRYLEPLRKMFPLLQTKETLATKD ELAPFEGYSSRLAAVDYLVCLFSEVFVTTQGGNFPHFLIGHRRYLFNGHAKTIKPDKIKL VTLLQNTSTSWIDFKDQMGSMLAESDRKGIMVPRVKKSTRKGSIYSNPLPECRCLWESKR TTNRSNSYLMVDH*

Transcript Sequence

Transcript ID	Solyc11g013270.2.1
Transcript Infomation	O-fucosyltransferase family protein (AHRD V3.3 *** AT1G38131.1)
Sequence	TTTCTCTAATTTAACTTACACGAAATTTATGGAAAAAAATAATCTTAAATATGTCAGAAG AAATAAAATAATGAAAATCTGACTAAAAAGAAAAGTAGGTCAATTTATTTGAAACGAAGT GTTTTGTTTCTTCATTTACATTTGCCAAACCATTGGGAAGTCAAAGTGAAGTATATTTTA CTGTCAACATCTTCACTCTCTTCCCCCTCCATTGTTGGCTCCATACTCCATGGCCACTCT AATTATTAACAACTACTATTTGAATGCACTACTCTCACTTTAGCTATATTTATCGAATCT CACATACGTTTTTCTCTCTCTTTTATACCTTTATTTATGTCTTCGAAAAGTGTTAATGGC GGTTGCACCATTAACAACACCTCCCCGCCGACATCTCCGCGTAACCGGCAAAATTGCCGG AGAAGACTACGCCGGCGGGGAAGCTTTTCAATGTTGCACCGGCGGTATTTTTTACTGCTT GTCTCTGTTCTATACTTTACAGGTCTGATCAGCTGCGTTGGTCCTCTGTTTTCTCTGCTG CAATTTTCTGGTTTAGCAAATGGTGCTGTTTATCGGAGTCATGAGATTTTTCAGAAGCTT TGGAATGATATTGAAGCTGATAATTCTTCTTCAATAGAGCTGTCCTCTGTGTGGATATAC AAAAGGAAGCTAAAAGAGCAAAGACCCTGTTCCTTTGGTACTACTGCCTCAACTAAAGAT TCTTCGAGAGCCAATCTTTACTTAATTGTTGATGCCAATGGTGGCCTCAATCAACAGCGA TCATCGATTTGCAATGCAGTAGTCATTGCTGCGCTATTGAATGCCACATTACTTATTCCT CGTCTGGAGTTTCACAATGTCTGGAGGGATTCGAGTGAATTTGGTGATATTTATGATGAA GACCATTTCATGTCCACCCTTAAAGATTATGTAGAAGTGGTTAAAGAACTACCATCAGAA GTGATGGAGAAATATGATTCTAATATCAGCAACATTCAGAATTTGCGAGTTCAAGCTTGG GCACCTCCAAGATATTACCTGGAAGAGGTTTATCCTGTCTTATTTAAGCAGCGGGTTGTT CGTATTTCCCCCTTTGCTAATAGATTGTCAATGCATCTTCCATCTCATCTTCAGTTCCTG AGATGCTTTTCTAATTATGAAGCTTTAAAGTTCTCTCCAGCCATATCAGAACTTGCAAAG AAGTTGGTCAAGCGTATGATTGAGAGGAGCTCTAACGCTGGTGGGAAGTATATTTCTATA CACCTTCGCTTTGAGGAGGATATGGTAGCCTTTTCGTGCTGTATTTATGACGGAGGACAG GTTGAGAAGTCAGAAATGGACGTTGTACGTGAGAAAGGATGGGGAAAGAAGTTCAAACAG AAATATCGCGTTATTGCACCTGGTCTCAACCGTAAAAATGGAAAATGTCCTATGACCCCT GTAGAGGTTGGCATGATGCTCAGGGGTATGGGATTTGCCAAAGACACTCCGATATATTTG GCTTCTGGGAAGATTTACCAGGCAGATAGATATCTAGAACCTCTGCGGAAGATGTTTCCC CTCCTACAAACCAAGGAGACCTTGGCAACCAAAGATGAACTTGCGCCATTTGAGGGTTAT TCATCAAGACTAGCCGCTGTGGACTACCTAGTATGCTTGTTTAGTGAAGTATTTGTAACC ACTCAAGGGGGAAACTTCCCTCATTTTTTGATCGGTCATAGAAGGTACCTTTTCAATGGA CATGCCAAGACTATCAAACCTGATAAAATCAAGCTTGTAACTTTATTGCAAAACACAAGT ACAAGCTGGATTGATTTCAAGGATCAAATGGGATCAATGTTGGCTGAAAGTGATCGGAAG GGCATAATGGTACCTAGAGTTAAGAAGTCTACCAGAAAAGGTTCTATCTATTCGAATCCT TTGCCTGAATGCAGGTGTCTTTGGGAGTCAAAAAGAACTACCAACCGTAGTAATTCATAC CTCATGGTAGATCACTGAGATTGTTCTGATTTGAGCAGCCCAAGTTGATCAATGAAGTTG GCATCCTTCTGCAAACACCAGACTTTATGTGTCAATGGGGAGTGGTAGAATAGATCCATA GTTGCAAGTCCAACGTTGATTGCAGGAATCAAAGATCGTAAAAGCATCTTGAGATTTGCC TTAGCCGGCGAGGCAGGACATTTGATCTGTGTATGTAGTTGATATCAGTACCACCCTTTG TAGTACCTAAACTTCCACTTACTATTATATAGTAGTAGTAATTTTTTTGTTCTTTCTCTT TTCTTATTAGGATTTGTTACTGCCTTCACATTTCTTTTGGAAACCAATTAACCTTTTTTC CTAAAATAAATTTAGCTCAAACAAATGCTTTAACTGAGTCACTAAACATAAACCATGCAG ATTCCAAAGAACTAAAATTAGATTTGGCTAGGCCAAATGGATGATCTGTGGCTTACCTAG ATTGTTTTCTTCAATTGTGGGTATTTACATAAACAACAAGAAAATACTTATTGGAGATTC ACGTGCAATAATTTGCATCAGTCTCATCAAAATGTTTGCATGACAATTATTTAAACTAGG TTAGTAAATAGGGTAAAGCTAAGGAAAACAAGGGATTGTCTAAAGAAATAACAATATAAT GTTTATCATAAAGGGAACCAAAACAGAAAACATCCTCAGTGTTTCTGATTTTCTTTCGAA CGAATATGTAATTATAGCAACACGTCATTTATAAAAAGAAAAAAAAAACAAAGTAATAAC CTTATTTAATTACAAAGCAATTGAATTTTGATAATTTGAGCTCTAAAAATTTAAAAATAA GACT