Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g013190.2.1
CDS Infomation

Oxysterol-binding family protein (AHRD V3.3 *** B9GUF2_POPTR)
Sequence

ATGCATCCATTTTGCTGTGTTCCAACAATTAACAACAATTGCCAATCTTCACCGTTACCG
ATGGCTCCGCCGCCGGCGCCGGAATTTACTAGATCGGCTGACTCACTCAACCGCTCTGCT
AGCGGGAGTTACAATCATAATTGGACTGTAAGTAACTCCAATCATCACCGTCATCGCAGT
TTGACCGAGTCATCCTCGTCAACGCCGGCGATTTTCACTTCTTTATCACGGCCAACTTCT
ATGAGGGAGGTGATTCAGTTGACGTGTGCTGCATCCGCTGGCGATCAAGTCAAGATCAAC
GACATCGTTGGGAATGGTATATCCGGAATTTTACACAAGTGGGTTAACTATGGAAAGGGA
TGGAGACCTAGGTGGTTCGTCTTGCAGGATGGAGTTTTATCCTATTATAAGATCCATGGA
CCGGATAGGATTGTTGTCAATTCGGAGACTGAGAAAGGATCTAAAGTTATTGGTGAAGTC
TCACTTAGGAGAATCTCCAGGAACAAGACGAATGCAACTTCTCAAGCTCGCCGCAAGCCT
GTTGGTGAAGTTCATCTCAAGGTCTCATCCATCCGTGAGAGTAGATCAGATGACAGGAGG
TTTTCGATTTTCACTGGAACAAAGAGGCTGCACCTGAGGGCTGAGACAAGAGAGGACAGA
ATAGCATGGATGGAAGCATTGCAGGCTGTGAAAGATATGTTCCCCAGAATGTCCAACAGT
GAATTAATGGCTCCCGTGGACGATGTAGCTGTCTCAACAGATAAGTTGAGGCAACAACTG
ATGAAGGAGGGTGTGAGTGAGTCTGCTATTCAGGAGAGTGAGCTGATAATGAGGAATGAG
TTTGCATCTTTGCAGAATCAACTGATGCTACTCAAGCAAAAGCATCGGATGCTTATGGAC
ACCTTGAGACAGTTAGAGACAGAAAAGGTCGATTTAGAGAATACTGTGGTTGATGAGAGT
CAAAGGCAGTGTAAAGAGGTCGGACCATCTGCTCAATTAAGGCAAGATAAATACAGTGAA
GCAAGTGCAAGTGAATCGGAGGATGACAATGAAAGAGTTGATGCTGCTGAGGAAGATACT
GATGATGAAGAGAACACTTTCTTTGACACTAAAGATTTTCTTTCATCAAGCTCTTTTAAA
AGCAGTGGTTCTGATTTTCGAACATCATCTTTCTCCTCGGATGATGATGATTTGTATGCA
TATGCATCTGATGAAAGTGTCGATCCTATTATTAGATCTGCTGGAACCAAGTTTCCTTAT
GTTAAGCGTCGTAAGAAATTGCCTAATCCCATTGAGAAAGAGAAAGGAGTCAGTTTATGG
TCGATGATCAAAGACAATATTGGGAAGGATCTCACAAAAGTGTGCCTCCCTGTCTACTTC
AATGAACCCCTTTCTTCTTTGCAAAAATCATTTGAAGACTTGGAGTACTCATACCTTCTT
GATCGGGCTTCTGAATGGGGAAGAAGGGGTGACAACCTTATGAGGATTCTCAATGTAGCA
GCGTTTGCCGTATCTGCATATGCTTCTACTGAAGGAAGGATTTGCAAACCATTCAATCCG
TTGTTAGGGGAGACTTATGAGGCTGAGTATCCAGATAAAGGCCTTCGGTTTTTCTCAGAA
AAGGTAAGTCATCATCCCATGATAATAGCATGCCATTGTGAGGGTACAGGATGGAAATTC
TGGGGAGATAGCAATTTGAAAAGCAAATTTTGGGGTCGCTCAATCCAGTTGGATCCTGTT
GGTATATTGACTCTTGAATTTGATGATGGGGAAATCTATCAGTGGAGCAAGGTAACTACA
TCGATATACAATCTGATTTTGGGGAAACTATATTGCGATCACTATGGTACAATGCGCATA
CAAGGAAATCGTAATTACTCTTGTAAGCTGAAATTCAAGGAGCAATCAATAATAGACCGG
AATCCACATCAGGTTCAGGGAATAGTTCAAGACAGGAGTGGGAAGACAGTAGCTACATTA
TTTGGGAAGTGGGATGAGAGTATGCATTATGTGAATGGGGATTTCTCCTTAGGAAAAGGA
TTTGATTCTCTCTCTGAGGCTCATTTGCTATGGAAGCGGAGCAAACCTCCCAAAGATCCT
ACTAGATATAATCTGACACGGTTCGCAATTACAATGAATGAGCTCATACCTGGACTGAAG
GACAAGCTGCCACCAACAGATTCTAGACTTAGACCTGATCAGAGGTGCTTGGAGAATGGT
GAGTATGACAGGGCTAATTCAGAAAAGCTGCGTCTTGAGGAACGGCAACGACAGGCTCGG
AAAATGCAAGAACGGGGTTGGAAGCCTCAGTGGTTTGCAAAAGAGAAAGGGGGTGATAGT
TACAACTACATTGGTGGTTATTGGGAAGCAAGGGAGAAGGGCAAGTGGGAGGCCTGTCCT
GATATTTTTGGTCATATCCCTTGTGATCAGATGTAA

Peptide Sequence

PEP ID

Solyc11g013190.2.1
PEP Infomation

Oxysterol-binding family protein (AHRD V3.3 *** B9GUF2_POPTR)
Sequence

MHPFCCVPTINNNCQSSPLPMAPPPAPEFTRSADSLNRSASGSYNHNWTVSNSNHHRHRS
LTESSSSTPAIFTSLSRPTSMREVIQLTCAASAGDQVKINDIVGNGISGILHKWVNYGKG
WRPRWFVLQDGVLSYYKIHGPDRIVVNSETEKGSKVIGEVSLRRISRNKTNATSQARRKP
VGEVHLKVSSIRESRSDDRRFSIFTGTKRLHLRAETREDRIAWMEALQAVKDMFPRMSNS
ELMAPVDDVAVSTDKLRQQLMKEGVSESAIQESELIMRNEFASLQNQLMLLKQKHRMLMD
TLRQLETEKVDLENTVVDESQRQCKEVGPSAQLRQDKYSEASASESEDDNERVDAAEEDT
DDEENTFFDTKDFLSSSSFKSSGSDFRTSSFSSDDDDLYAYASDESVDPIIRSAGTKFPY
VKRRKKLPNPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKSFEDLEYSYLL
DRASEWGRRGDNLMRILNVAAFAVSAYASTEGRICKPFNPLLGETYEAEYPDKGLRFFSE
KVSHHPMIIACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEIYQWSKVTT
SIYNLILGKLYCDHYGTMRIQGNRNYSCKLKFKEQSIIDRNPHQVQGIVQDRSGKTVATL
FGKWDESMHYVNGDFSLGKGFDSLSEAHLLWKRSKPPKDPTRYNLTRFAITMNELIPGLK
DKLPPTDSRLRPDQRCLENGEYDRANSEKLRLEERQRQARKMQERGWKPQWFAKEKGGDS
YNYIGGYWEAREKGKWEACPDIFGHIPCDQM*

Transcript Sequence

Transcript ID

Solyc11g013190.2.1
Transcript Infomation

Oxysterol-binding family protein (AHRD V3.3 *** B9GUF2_POPTR)
Sequence

ATATAGAGAGATTATTATATATAAAAAGATTTTTTTTTTAAAAAAGAAGAAGAAGTTGTA
TATGATAAAAAGTAATTTTGAAAAACTAGTATGATATGCTATGCATCCATTTTGCTGTGT
TCCAACAATTAACAACAATTGCCAATCTTCACCGTTACCGATGGCTCCGCCGCCGGCGCC
GGAATTTACTAGATCGGCTGACTCACTCAACCGCTCTGCTAGCGGGAGTTACAATCATAA
TTGGACTGTAAGTAACTCCAATCATCACCGTCATCGCAGTTTGACCGAGTCATCCTCGTC
AACGCCGGCGATTTTCACTTCTTTATCACGGCCAACTTCTATGAGGGAGGTGATTCAGTT
GACGTGTGCTGCATCCGCTGGCGATCAAGTCAAGATCAACGACATCGTTGGGAATGGTAT
ATCCGGAATTTTACACAAGTGGGTTAACTATGGAAAGGGATGGAGACCTAGGTGGTTCGT
CTTGCAGGATGGAGTTTTATCCTATTATAAGATCCATGGACCGGATAGGATTGTTGTCAA
TTCGGAGACTGAGAAAGGATCTAAAGTTATTGGTGAAGTCTCACTTAGGAGAATCTCCAG
GAACAAGACGAATGCAACTTCTCAAGCTCGCCGCAAGCCTGTTGGTGAAGTTCATCTCAA
GGTCTCATCCATCCGTGAGAGTAGATCAGATGACAGGAGGTTTTCGATTTTCACTGGAAC
AAAGAGGCTGCACCTGAGGGCTGAGACAAGAGAGGACAGAATAGCATGGATGGAAGCATT
GCAGGCTGTGAAAGATATGTTCCCCAGAATGTCCAACAGTGAATTAATGGCTCCCGTGGA
CGATGTAGCTGTCTCAACAGATAAGTTGAGGCAACAACTGATGAAGGAGGGTGTGAGTGA
GTCTGCTATTCAGGAGAGTGAGCTGATAATGAGGAATGAGTTTGCATCTTTGCAGAATCA
ACTGATGCTACTCAAGCAAAAGCATCGGATGCTTATGGACACCTTGAGACAGTTAGAGAC
AGAAAAGGTCGATTTAGAGAATACTGTGGTTGATGAGAGTCAAAGGCAGTGTAAAGAGGT
CGGACCATCTGCTCAATTAAGGCAAGATAAATACAGTGAAGCAAGTGCAAGTGAATCGGA
GGATGACAATGAAAGAGTTGATGCTGCTGAGGAAGATACTGATGATGAAGAGAACACTTT
CTTTGACACTAAAGATTTTCTTTCATCAAGCTCTTTTAAAAGCAGTGGTTCTGATTTTCG
AACATCATCTTTCTCCTCGGATGATGATGATTTGTATGCATATGCATCTGATGAAAGTGT
CGATCCTATTATTAGATCTGCTGGAACCAAGTTTCCTTATGTTAAGCGTCGTAAGAAATT
GCCTAATCCCATTGAGAAAGAGAAAGGAGTCAGTTTATGGTCGATGATCAAAGACAATAT
TGGGAAGGATCTCACAAAAGTGTGCCTCCCTGTCTACTTCAATGAACCCCTTTCTTCTTT
GCAAAAATCATTTGAAGACTTGGAGTACTCATACCTTCTTGATCGGGCTTCTGAATGGGG
AAGAAGGGGTGACAACCTTATGAGGATTCTCAATGTAGCAGCGTTTGCCGTATCTGCATA
TGCTTCTACTGAAGGAAGGATTTGCAAACCATTCAATCCGTTGTTAGGGGAGACTTATGA
GGCTGAGTATCCAGATAAAGGCCTTCGGTTTTTCTCAGAAAAGGTAAGTCATCATCCCAT
GATAATAGCATGCCATTGTGAGGGTACAGGATGGAAATTCTGGGGAGATAGCAATTTGAA
AAGCAAATTTTGGGGTCGCTCAATCCAGTTGGATCCTGTTGGTATATTGACTCTTGAATT
TGATGATGGGGAAATCTATCAGTGGAGCAAGGTAACTACATCGATATACAATCTGATTTT
GGGGAAACTATATTGCGATCACTATGGTACAATGCGCATACAAGGAAATCGTAATTACTC
TTGTAAGCTGAAATTCAAGGAGCAATCAATAATAGACCGGAATCCACATCAGGTTCAGGG
AATAGTTCAAGACAGGAGTGGGAAGACAGTAGCTACATTATTTGGGAAGTGGGATGAGAG
TATGCATTATGTGAATGGGGATTTCTCCTTAGGAAAAGGATTTGATTCTCTCTCTGAGGC
TCATTTGCTATGGAAGCGGAGCAAACCTCCCAAAGATCCTACTAGATATAATCTGACACG
GTTCGCAATTACAATGAATGAGCTCATACCTGGACTGAAGGACAAGCTGCCACCAACAGA
TTCTAGACTTAGACCTGATCAGAGGTGCTTGGAGAATGGTGAGTATGACAGGGCTAATTC
AGAAAAGCTGCGTCTTGAGGAACGGCAACGACAGGCTCGGAAAATGCAAGAACGGGGTTG
GAAGCCTCAGTGGTTTGCAAAAGAGAAAGGGGGTGATAGTTACAACTACATTGGTGGTTA
TTGGGAAGCAAGGGAGAAGGGCAAGTGGGAGGCCTGTCCTGATATTTTTGGTCATATCCC
TTGTGATCAGATGTAAAGAAAGAGTGAGTGAAACTCTAAATCAATTTCCGGCTTATTACT
TCCATTTCTTTACAAATATTTTACACAATCATTATACAGTACACTAGTGGAGAGGGTGCA
AATTGTTTATGACATATGTAAAGTAGTACTTTGAATACCTTAAAAGTAATAAAGGTTTCA
TTCTTTTTCGTCCAT