Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g013170.2.1
CDS Infomation

Aminotransferase (AHRD V3.3 *** Q67UZ0_ORYSJ)
Sequence

ATGCGAATCTGTAAAGCAATTCGATGTACCTGGACGCCTCAATATTCCAGTCAAATGCTT
CAGCAGCCATTGAAGAGCTTTAAACCCTACATTCTTCGCAATTTTCCCACAAAATACTCT
TCTACAATGGCCACCGCTTCAACCCAGAATGATGTCGCTGTTTCTACTCAAGATAAGTCA
ACCCACATACTTCCTAAGCCTATTCAGGTTGCCAAGCGCCTAGAGAAGTTCAAAACTACA
ATTTTCACCCAGATGAGCATGCTAGCCATCAAGCATGGAGCTATCAACCTCGGCCAGGGC
TTCCCCAACTTTGACGGCCCGGATTTTGTTAAAGAAGCGGCTATTCAATCTATTAAGGAA
GGTAAAAATCAGTATGCTCGAGGATATGGAGTCCCAGACCTCAACTCTGCTGTGGCTGCT
AGATTCAAGAAAGACAGTGGTCTTGATGTTGACCCCGAAAAGGAAGTCACTGTGACTTCA
GGCTGTACTGAAGCAATTGCTGCCACCATGTTGGGTTTGATAAATCCTGGTGATGAGGTC
ATCCTGTTTGCTCCTTTCTATGATTCTTATGAAGCTACTTTATCTATGGCTGGAGCAAAG
ATAAAGGGTATTACTTTAAGACCACGAGATTTTTCTCTTCCGATTGAGGAGCTAAAATCA
GCAGTATCTAAGAATACTCGAGCAATCCTCCTAAATACTCCGCATAACCCCACTGGAAAG
ATGTTCACTCGAGAAGAACTCAACGTCATTGCCTCTCTGTGCATTGAGAATGACGTTCTA
GTTTTTGCTGATGAAGTTTATGACAAGTTAGCCTTTGAAATGGAACACATTTCAATTGCT
TCTCTTCCCGGGATGTATGAACGAACTGTAACCATGAATTCTTTGGGAAAGACATTCTCG
CTAACAGGCTGGAAAATAGGTTGGGCAATAGCTCCTCCTCATTTGACATGGGGAATACGA
CAGGCTCATTCCTACCTCACCTTTGCAACATCCACTCCGATGCAATATGCATCTGCTACT
GCCCTTAGAACTCCAGATTCTTACTATGAGGAGCTTAAGAGGGATTACTCAGCCAAAAAG
GAAATACTGGTGGAGGGGCTAATGAAAGCTGGTTTCACAGTATACCCCTCGAGTGGAACG
TACTTTGTGGTTGTTGATCATACCCCTTTTGGGTTGGAAAATGACATTGCTTTCTGTGAA
TACCTGATCAAGGAAGTTGGCGTTGTAGCCATTCCAACTAGCGTATTCTATCTAAATCCG
GAAGAAGGAAAGAATCTTGTGAGGTTTACCTTCTGCAAAGATGAAGACACTCTTAGAAGT
GCAGTGCAGAGGATGAAGGAGAAGCTGTCAAGGAAGTGA

Peptide Sequence

PEP ID

Solyc11g013170.2.1
PEP Infomation

Aminotransferase (AHRD V3.3 *** Q67UZ0_ORYSJ)
Sequence

MRICKAIRCTWTPQYSSQMLQQPLKSFKPYILRNFPTKYSSTMATASTQNDVAVSTQDKS
THILPKPIQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKEAAIQSIKE
GKNQYARGYGVPDLNSAVAARFKKDSGLDVDPEKEVTVTSGCTEAIAATMLGLINPGDEV
ILFAPFYDSYEATLSMAGAKIKGITLRPRDFSLPIEELKSAVSKNTRAILLNTPHNPTGK
MFTREELNVIASLCIENDVLVFADEVYDKLAFEMEHISIASLPGMYERTVTMNSLGKTFS
LTGWKIGWAIAPPHLTWGIRQAHSYLTFATSTPMQYASATALRTPDSYYEELKRDYSAKK
EILVEGLMKAGFTVYPSSGTYFVVVDHTPFGLENDIAFCEYLIKEVGVVAIPTSVFYLNP
EEGKNLVRFTFCKDEDTLRSAVQRMKEKLSRK*

Transcript Sequence

Transcript ID

Solyc11g013170.2.1
Transcript Infomation

Aminotransferase (AHRD V3.3 *** Q67UZ0_ORYSJ)
Sequence

TATTATAGAACTCAAACAATTAAGAAAGTCTACTTTACCCTTCAGCTAACCCTTGCATTT
TAGAAGCTAAAAGAAGGAAGTGAGTAGGCGTATCAATCAATTCCAAAAAGGGTCAATCAA
TCAATACACATAAAGACCATTTTTTTTGAATCGGATGAATTAGTATCTATCTACCACTTA
CCAATAAATACGGATGCGAATCTGTAAAGCAATTCGATGTACCTGGACGCCTCAATATTC
CAGTCAAATGCTTCAGCAGCCATTGAAGAGCTTTAAACCCTACATTCTTCGCAATTTTCC
CACAAAATACTCTTCTACAATGGCCACCGCTTCAACCCAGAATGATGTCGCTGTTTCTAC
TCAAGATAAGTCAACCCACATACTTCCTAAGCCTATTCAGGTTGCCAAGCGCCTAGAGAA
GTTCAAAACTACAATTTTCACCCAGATGAGCATGCTAGCCATCAAGCATGGAGCTATCAA
CCTCGGCCAGGGCTTCCCCAACTTTGACGGCCCGGATTTTGTTAAAGAAGCGGCTATTCA
ATCTATTAAGGAAGGTAAAAATCAGTATGCTCGAGGATATGGAGTCCCAGACCTCAACTC
TGCTGTGGCTGCTAGATTCAAGAAAGACAGTGGTCTTGATGTTGACCCCGAAAAGGAAGT
CACTGTGACTTCAGGCTGTACTGAAGCAATTGCTGCCACCATGTTGGGTTTGATAAATCC
TGGTGATGAGGTCATCCTGTTTGCTCCTTTCTATGATTCTTATGAAGCTACTTTATCTAT
GGCTGGAGCAAAGATAAAGGGTATTACTTTAAGACCACGAGATTTTTCTCTTCCGATTGA
GGAGCTAAAATCAGCAGTATCTAAGAATACTCGAGCAATCCTCCTAAATACTCCGCATAA
CCCCACTGGAAAGATGTTCACTCGAGAAGAACTCAACGTCATTGCCTCTCTGTGCATTGA
GAATGACGTTCTAGTTTTTGCTGATGAAGTTTATGACAAGTTAGCCTTTGAAATGGAACA
CATTTCAATTGCTTCTCTTCCCGGGATGTATGAACGAACTGTAACCATGAATTCTTTGGG
AAAGACATTCTCGCTAACAGGCTGGAAAATAGGTTGGGCAATAGCTCCTCCTCATTTGAC
ATGGGGAATACGACAGGCTCATTCCTACCTCACCTTTGCAACATCCACTCCGATGCAATA
TGCATCTGCTACTGCCCTTAGAACTCCAGATTCTTACTATGAGGAGCTTAAGAGGGATTA
CTCAGCCAAAAAGGAAATACTGGTGGAGGGGCTAATGAAAGCTGGTTTCACAGTATACCC
CTCGAGTGGAACGTACTTTGTGGTTGTTGATCATACCCCTTTTGGGTTGGAAAATGACAT
TGCTTTCTGTGAATACCTGATCAAGGAAGTTGGCGTTGTAGCCATTCCAACTAGCGTATT
CTATCTAAATCCGGAAGAAGGAAAGAATCTTGTGAGGTTTACCTTCTGCAAAGATGAAGA
CACTCTTAGAAGTGCAGTGCAGAGGATGAAGGAGAAGCTGTCAAGGAAGTGAATACCTTA
TTGTTCTGGCATGAATTATTTGCAACTGTGATACCCTGGGAGTAAACTAAACCTAGTGGT
GTTATTTCATTATAAGTTAAAATGATTTTCGTGTTCCTTTCACTGCTAGTACGATACTTC
CATTTGAGGTGAAGTGCTATTATTTAGATTTATCTGAATGAGACATTTGATAATTAAAGC
GCATTTAACACTTTATTGGTCTGGATAGATTTTAGTCATCGGAATCTAGAATAGTGGAGT
GTGGTTGTATTATGAAAAATATTTTCTTGAAGCGTATTTTTCAATTTTTCAATGTTTGGT
TGACTTATCTTC