Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g012920.2.1
CDS Infomation

translation initiation factor (AHRD V3.3 *** AT1G44780.2)
Sequence

ATGGAGGATGCTGCTGCTGATGGTGTCCCTAAGGATTCCCAGGAAAATTTGGAAAAAGAT
ACTTCTTTGACTAAACAAGAAAAAGAAGTGCTCGAGTCCCCCAAAAAGCAAGTGATAAAG
AAAGATATCAAAGAGCCAGCACTTGATCAAGCAGAAATGGATGATTCTCCTATAATGGGC
GTTATGAGCTCGAAATCTGAGTCAGTGGATGCTCAAAGTCTAAAGGTAAGTGAGAGCTCA
ATAAAGAAGGCCATCTGGGAGAGAGCTGATCACTTCAGAGATAATTCCGAGTCAATAACT
CTGGCTGGTGTTCGTAGACTTTTGGAAGAAGATCTTGGTCTTGAGAAAAATACTCTTGAT
GCCTTTAAGAAGTTTATTCATAGTCAAATAGATGAGGTGTTAATACCTTCTGAAGCTCCT
AAATCTAGCAGTGTTAAGAAAAGCCCTGAAAACAAAAGTAAAACAGCAAAGAAGAGTGGT
GAAAACTCCAATTCTAGCAGCAAACGTAAACGTATAGCAGAAAAAGTAAAATCAGGAAAG
AATTCTGCTGCAAAAGAAACAGTTGAGAAATCTGAAGGACTGAAGAAACGGAAAAAACCT
AATTCAGAAGATAATGTCCCTGCAGAAAATCAGAAAGAAGTTTCTAAGAATCTGTCAGAT
GAAGATAGTGACGGAGACACTGATAAGAGTGATTCTGAAGATGGTCAATCTGGATCGTCG
GCTGAAATAATATCTGACAAGGAGAAAGTTGTAAAGGGAGCATCAGCTAATACTGGATAC
GGAAAACGTGTGGAACATCTGAAATCAATCTTCAAAGCTTGTGGGATGAGTGTTGCTCCT
TTTCTTTATAAGAGAGCCAAACAGGTATCTGACGACAAACGTGAAGGCTTCCTGATAAAG
GAGTTAGAAAAGATGCTTTCTGCAGAAGGACTATCATCGAACCCCACCGAAAAAGAAATC
AAAGAAGTCAAAAAGAGAAAGCAAACAGCAAAAGAATTGGAAGGTATTGACTTAAGCAAC
ATTGTTTCAAATACACGAAGGAGATCAACGACCAGCTTTGTGGATCCTCCAAGACCCAAG
TCACCACCTAAAAATGATAAGAATGATGACAAGGATGGTGATAGCGATGCCGATGATGGA
AGTGATGATGACAAAGACGATGATGACGATGAAGATGATGAGAGCAGTCAGAGTGATGAG
GAGTTCAATGGAGATGATGATGAGGACAGTGAATGA

Peptide Sequence

PEP ID

Solyc11g012920.2.1
PEP Infomation

translation initiation factor (AHRD V3.3 *** AT1G44780.2)
Sequence

MEDAAADGVPKDSQENLEKDTSLTKQEKEVLESPKKQVIKKDIKEPALDQAEMDDSPIMG
VMSSKSESVDAQSLKVSESSIKKAIWERADHFRDNSESITLAGVRRLLEEDLGLEKNTLD
AFKKFIHSQIDEVLIPSEAPKSSSVKKSPENKSKTAKKSGENSNSSSKRKRIAEKVKSGK
NSAAKETVEKSEGLKKRKKPNSEDNVPAENQKEVSKNLSDEDSDGDTDKSDSEDGQSGSS
AEIISDKEKVVKGASANTGYGKRVEHLKSIFKACGMSVAPFLYKRAKQVSDDKREGFLIK
ELEKMLSAEGLSSNPTEKEIKEVKKRKQTAKELEGIDLSNIVSNTRRRSTTSFVDPPRPK
SPPKNDKNDDKDGDSDADDGSDDDKDDDDDEDDESSQSDEEFNGDDDEDSE*

Transcript Sequence

Transcript ID

Solyc11g012920.2.1
Transcript Infomation

translation initiation factor (AHRD V3.3 *** AT1G44780.2)
Sequence

AGAGTCCTTTAAATTTTGTAATGGAACTAACGTTCTTGTTTGTATCTACTGCATCTTCTT
GATGCCTTCAATGAAACTGTAAAAATCAAAAGGTCATTTAAAACATCTAAATTGGTTGTA
ATATATTCAGTGAATATTGACTAGCTTTTAACACGAAATCTCAAATTTTCGATGCCTAAT
CATTAAATATTAACTCATAGTTTTCTTATGACATTAGCATACAATTGGTCAACTATATTT
ATTGTCTAAGGCCACATTTTCAAGATAGAGCCCACGCGAGCCCATTGCCTTGGCACCTGG
CTGTGTACCCAGCTTTGGGGCTTAACAGAGCCTCAAGCAAGCCTTAAAATGACACCCTTT
TTATGAGAAAATTATTCTTATGGTTACTTTTACTTAGACTTCTAGGTAGTTGTTTGGTCA
GTTCAGAGTGACATTCTCCATCTGTGATTAATTTAATGAGAGTTATGCAGTTATGCTTCA
GACTGTAATGCTTTCAGTAGCTATTTTCTGCAAGCTCTTCTTCAATTTGTCATTTTTGCA
CTTTTGGCATGTTACATTATATGCCCTCGCATGAAAAGGCCTTTTACAGTTTCTAATTGT
TTTTTGTTTGACATGCTAGCTAATGGAGGATGCTGCTGCTGATGGTGTCCCTAAGGATTC
CCAGGAAAATTTGGAAAAAGATACTTCTTTGACTAAACAAGAAAAAGAAGTGCTCGAGTC
CCCCAAAAAGCAAGTGATAAAGAAAGATATCAAAGAGCCAGCACTTGATCAAGCAGAAAT
GGATGATTCTCCTATAATGGGCGTTATGAGCTCGAAATCTGAGTCAGTGGATGCTCAAAG
TCTAAAGGTAAGTGAGAGCTCAATAAAGAAGGCCATCTGGGAGAGAGCTGATCACTTCAG
AGATAATTCCGAGTCAATAACTCTGGCTGGTGTTCGTAGACTTTTGGAAGAAGATCTTGG
TCTTGAGAAAAATACTCTTGATGCCTTTAAGAAGTTTATTCATAGTCAAATAGATGAGGT
GTTAATACCTTCTGAAGCTCCTAAATCTAGCAGTGTTAAGAAAAGCCCTGAAAACAAAAG
TAAAACAGCAAAGAAGAGTGGTGAAAACTCCAATTCTAGCAGCAAACGTAAACGTATAGC
AGAAAAAGTAAAATCAGGAAAGAATTCTGCTGCAAAAGAAACAGTTGAGAAATCTGAAGG
ACTGAAGAAACGGAAAAAACCTAATTCAGAAGATAATGTCCCTGCAGAAAATCAGAAAGA
AGTTTCTAAGAATCTGTCAGATGAAGATAGTGACGGAGACACTGATAAGAGTGATTCTGA
AGATGGTCAATCTGGATCGTCGGCTGAAATAATATCTGACAAGGAGAAAGTTGTAAAGGG
AGCATCAGCTAATACTGGATACGGAAAACGTGTGGAACATCTGAAATCAATCTTCAAAGC
TTGTGGGATGAGTGTTGCTCCTTTTCTTTATAAGAGAGCCAAACAGGTATCTGACGACAA
ACGTGAAGGCTTCCTGATAAAGGAGTTAGAAAAGATGCTTTCTGCAGAAGGACTATCATC
GAACCCCACCGAAAAAGAAATCAAAGAAGTCAAAAAGAGAAAGCAAACAGCAAAAGAATT
GGAAGGTATTGACTTAAGCAACATTGTTTCAAATACACGAAGGAGATCAACGACCAGCTT
TGTGGATCCTCCAAGACCCAAGTCACCACCTAAAAATGATAAGAATGATGACAAGGATGG
TGATAGCGATGCCGATGATGGAAGTGATGATGACAAAGACGATGATGACGATGAAGATGA
TGAGAGCAGTCAGAGTGATGAGGAGTTCAATGGAGATGATGATGAGGACAGTGAATGAAG
TTTTCTGGTGACTGAAGATTATAATTTACAGATCAGGGACGGTCTTTCCAATGTATCAAT
AGTTTCAGTTTCTCAACTTAGATTTGGGAGCTGATGTTTAATGTATTTTAGAAGTATATT
TACAAAGAGTTGTGATATTTAGCTTTGTTTAGAAGTATTGAACTTAGCCAGTCATGGATA
TTAGATACCATATTTGTTAGTTATCGAGGGACGTTGTACATGGAACATCTTTGCTTGTGC
ATTGTAGGTGGTGATAATCTTCATGTTTATGGTGGTAGCAGTGTTTTACAAGGCTTCTTG
CCACAAGGCGAGTCTAAGTGGTAAGACTCTTGTCTTACAAGGCCTATGCCCAAATTTTCG
ACTCTGCGTCCCCAAAGTGCATTGGACGCCCAGCTCTTCATTTCATCTCATCAGTTTTGA
TTTGGAATTCTTCTCAATTAACCTTTTGCTTGTCGAAGTCGTCTTCATTTATTTCAATTT
TCAAGTATGAAGTTTGAGAAAATTTCAACCCTAAATTGACATGTTCTTTTATTGCGAAGT
GAGTGAGGGTTTGGATTCAGTTTTAACCTGGTTTTTGGGAATTGTCAAACCTTATGTTTT
CATTTGCTATTGGTTTTTAGTTCTTAGTTGAGTATTTTTAGTGGTTCATTTTTTAATTTT
TTTTTCATTTGAAACAATGTGGTCCTTTATAAGTTCGTTAGGGAAGAACCTGATTACTTT
TTATCTGTTAGTGGGTGTGGTAGCTCACTATTGTTAATTAGTACTAAAAGAATAATATAT
TTCCTTGTTTTGCAAACAATTGATGACACTATCATTCAACTATCTTGGTCCTACTTATGT
AGTAAGATTGCACAAAGGTGAACTTTTTTATTTAAAATTTTATTAATCTTGGAGAGTAGT
TTTGAAACA