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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g012870.2.1
CDS Infomation

lysM domain-containing protein
Sequence

ATGCTACCTTTCTTGTTCCTCTTGTTGAGCTTTAGTTTCATCGATCCCACAACTTCAAAA
TCTACTATTGAGCCATGTTCCAACTCTGATACTTGTTCTTCCCTTCTTGGCTACTCTCTT
TATACTGACCTTAAGGTTTCTGAAGTGGCTTCACTCTTTCAAACAGACCCAATATCTCTT
CTTACTACTAATGCTATTGATATCTCATATCCAGATGTTGAAAACCACATACTTCCAGCT
AAACTGTTCCTTAAGGTTCCTGTTACTTGTTCTTGTGTTGATGGGATCTTTAAGTCTGCT
TTTGTTCATTACAAGACTAGGCCTTCTGATACTCTGTCTTTGATTGCTGACATAATATAT
GGGGGTCTTGTTTCTGCTGACCAGATCAAGGAAGGAAACCCCAATGCTGTTGGTCCTGAC
CCTTCAGTGTTAAATGTTGGGACTAATCTTTGGATTCCTCTTCCTTGCACTTGCTTTAAT
GGGACTGACAATAATCTTCCTGCTATTTATATGTCATATGTTGTTAGAGCTGTTGATACT
CTTGCAGGGATTGCTGCTAGGTACTCTACCACTCTTACTGACCTTATGAATGTTAATGCT
TTGGGAGGTCCTTCTATTAAGGAGGGTGACATTCTTTCCATTCCTTTGTCTGCTTGTACG
TCTAGCTTCCCAAGATCTGCCTCGGATTATGGCTTATCTGTTGCGAATGGGAGCTATTCT
ATTACAGCTAGCCACTGTGTGCAATGCAGTTGTGGACCAGGGGGTCGGAATTTGTACTGC
ATGCCAGCTTCTTTAGCAGTTTCTTGCTCAAGCATGCAGTGCAAGAACAGCAATCTCATG
CTCGGAAATGTTACCATACAACAGACTGGTGGTGGTTGCAATGTGACTTCTTGCAATTAC
GGTGGCCTTGTTAATGGAACCATCATCACTACATTATCCACATCGCTTCAACCTCGATGC
CCTGGACCTCAACAATTTCCTCCACTTGTTGCCCCACCTACATCACTAGGCCCCGACTTG
ATGTTTGCTCCTGCCCCTTCACCTTCTGAATCTGGTGGTGCTCCGATGTACCGTCCACAT
ACTTCTATAGTCCCTGCATCTGGCTCAATCATAGCATTTCCACCTTCAGGTGGACCAAGT
GGAAGTACATCTTCCGCTTGCTCGTTGAACCCTTTCGTTAGTCTTCTTATGGCAGTTTTC
TTGTGTTTGTTTATGAAATACGCGATCGCGCTTCCTTTATAA

Peptide Sequence

PEP ID

Solyc11g012870.2.1
PEP Infomation

lysM domain-containing protein
Sequence

MLPFLFLLLSFSFIDPTTSKSTIEPCSNSDTCSSLLGYSLYTDLKVSEVASLFQTDPISL
LTTNAIDISYPDVENHILPAKLFLKVPVTCSCVDGIFKSAFVHYKTRPSDTLSLIADIIY
GGLVSADQIKEGNPNAVGPDPSVLNVGTNLWIPLPCTCFNGTDNNLPAIYMSYVVRAVDT
LAGIAARYSTTLTDLMNVNALGGPSIKEGDILSIPLSACTSSFPRSASDYGLSVANGSYS
ITASHCVQCSCGPGGRNLYCMPASLAVSCSSMQCKNSNLMLGNVTIQQTGGGCNVTSCNY
GGLVNGTIITTLSTSLQPRCPGPQQFPPLVAPPTSLGPDLMFAPAPSPSESGGAPMYRPH
TSIVPASGSIIAFPPSGGPSGSTSSACSLNPFVSLLMAVFLCLFMKYAIALPL*

Transcript Sequence

Transcript ID

Solyc11g012870.2.1
Transcript Infomation

lysM domain-containing protein
Sequence

CCACCATTTTCAAGAAAACCCCTTTACTCTTTCAAACCCCAAATCTCCCATTTTGCTCTC
TCCACTTGCAGAGACAAGAATTCATTTTTTTTTGTGTGTTTCTGCAACTTCTTGCTGTAG
AACCAAGAATTGAGCTTAAAGGGCAAAAGGGTATCTGAGAAAAATGCTACCTTTCTTGTT
CCTCTTGTTGAGCTTTAGTTTCATCGATCCCACAACTTCAAAATCTACTATTGAGCCATG
TTCCAACTCTGATACTTGTTCTTCCCTTCTTGGCTACTCTCTTTATACTGACCTTAAGGT
TTCTGAAGTGGCTTCACTCTTTCAAACAGACCCAATATCTCTTCTTACTACTAATGCTAT
TGATATCTCATATCCAGATGTTGAAAACCACATACTTCCAGCTAAACTGTTCCTTAAGGT
TCCTGTTACTTGTTCTTGTGTTGATGGGATCTTTAAGTCTGCTTTTGTTCATTACAAGAC
TAGGCCTTCTGATACTCTGTCTTTGATTGCTGACATAATATATGGGGGTCTTGTTTCTGC
TGACCAGATCAAGGAAGGAAACCCCAATGCTGTTGGTCCTGACCCTTCAGTGTTAAATGT
TGGGACTAATCTTTGGATTCCTCTTCCTTGCACTTGCTTTAATGGGACTGACAATAATCT
TCCTGCTATTTATATGTCATATGTTGTTAGAGCTGTTGATACTCTTGCAGGGATTGCTGC
TAGGTACTCTACCACTCTTACTGACCTTATGAATGTTAATGCTTTGGGAGGTCCTTCTAT
TAAGGAGGGTGACATTCTTTCCATTCCTTTGTCTGCTTGTACGTCTAGCTTCCCAAGATC
TGCCTCGGATTATGGCTTATCTGTTGCGAATGGGAGCTATTCTATTACAGCTAGCCACTG
TGTGCAATGCAGTTGTGGACCAGGGGGTCGGAATTTGTACTGCATGCCAGCTTCTTTAGC
AGTTTCTTGCTCAAGCATGCAGTGCAAGAACAGCAATCTCATGCTCGGAAATGTTACCAT
ACAACAGACTGGTGGTGGTTGCAATGTGACTTCTTGCAATTACGGTGGCCTTGTTAATGG
AACCATCATCACTACATTATCCACATCGCTTCAACCTCGATGCCCTGGACCTCAACAATT
TCCTCCACTTGTTGCCCCACCTACATCACTAGGCCCCGACTTGATGTTTGCTCCTGCCCC
TTCACCTTCTGAATCTGGTGGTGCTCCGATGTACCGTCCACATACTTCTATAGTCCCTGC
ATCTGGCTCAATCATAGCATTTCCACCTTCAGGTGGACCAAGTGGAAGTACATCTTCCGC
TTGCTCGTTGAACCCTTTCGTTAGTCTTCTTATGGCAGTTTTCTTGTGTTTGTTTATGAA
ATACGCGATCGCGCTTCCTTTATAAGGATCCTTATGAGTTGTGGAATTTTTTCCCCTTGT
TAGAAAGAGGATGTGTTTCTTTTCTTCCTTCAAGTGTAATTTTCACTTGAAGATTGTAGT
GATTGCTCCAAAATTCTGACTTAATTTTGTGATTTTTATATTTTTTTTAGTGAATTTTGA
ACAGTGATATCTGTTTTTGCATAGTCTATTCTTACATTTCTCACAATGCCTTCTTCCGTT
GCGGCGACAATATTTTTGAAGAGTCCGACAAACAAGCACGGTAAGTAAAATA