Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g012850.2.1
CDS Infomation	Chlorophyllide a oxygenase (AHRD V3.3 *** W9SD87_9ROSA)
Sequence	ATGACAGCCATTGCTACTGCTACTGCTATTTCTCTTTCACTTCCTTTCTCTTTGTGCCGC TCTAACAAGTCTTGTACTAGAAAGTTTGTCAAAGGGAGCTTTGGAGTATTTGCTGTGTAT GGGGAGGAGGGTGGGATTCCAGATAAGAAAAGTTCCTGGTTGACACTCTTTAATGTGGAA GATCCCAGGACTAAAGTTCCACAAAGTAAAGGCAAGTTCTTGGATGCAAATCAAGCTTTA GAAGTTGCTAGATATGATCTACAATACTGTGATTGGAGAGCTAGGCAAGATGTACTTACT ATAATGCTGCTACACGAAAAGGTTGTGGAAGTATTAAACCCTCTGGCACGCGATTATAAA TCTATTGGAACCATGAAGAAGGAACTTGCAGAATTGCAAGAAGAACTTTCTCAGGCTCAC AACCAGGTACATATATCAGAGGCCCGGGTTTCTGCTGCTTTAGATAAGCTAGCTTACATG GAAGAATTGGTTAACGATAGGCTTCTGCAAGAGAGAAGCACAGTAGAATCAGAATGCACG TCTTCCTCTGCAAGCACGTCAACAGGATTATTAGACACTCCAAAAAGCAAGCAACCACGA AGAACGCTGAATGTCTCAGGTCCTGTCCAAGATTACAGTTCCCGTTTGAAGAACTTTTGG TACCCTGTTGCATTCTCCGCAGATCTTAAGAATGACACCATGTTACCGATTGATTGCTTT GAGCAATCGTGGGTGATCTTTCGTGGGGCTGATGGAAAACCTGGATGTGTCCGGAATACA TGTGCACATAGAGCCTGCCCTCTTGATCTTGGCTCAGTAAATGAGGGTCGCATCCAATGC CCTTATCACGGATGGGAGTATTCCACCGACGGGAAGTGTGAGAAAATGCCATCAACAAGA TTACTGAATGTAAAGATCAAAGCACTGCCCTGCTTTGAGCAAGAGGGAATGATATGGATT TGGCCAGGAAATGATCCACCTGCAGCTACCCTTCCTTCTTTACTACCACCTTCTGGATTT CAGATCCATGCTGAGATAGTCATGGAACTTCCAGTGGAACATGGACTACTTTTAGACAAT CTTTTAGATCTTGCACACGCACCTTTCACACATACATCAACTTTTGCTAAAGGATGGAGT GTACCAAGCTTGGTAAAGTTCTTGACTCCTGCATCTGGTCTGCAAGGATATTGGGATCCA TATCCAATAGATATGGAATTTAGACCACCTTGTATGGTTTTATCCACCATTGGCATCTCA AAGCCAGGCAAATTGGAAGGACAGAGTACCAAGCAGTGTTCTACGCACCTTCATCAACTG CATGTTTGCTTACCTGCATCACGACAGAAAACACGGTTATTATATAGAATGTCACTGGAT TTTGCTCCCCTGCTGAAACACATCCCCTTCATGCAATACGTTTGGAGACATTTTGCTGAG CAGGTTTTAAACGAAGACTTACGGCTTGTGCTTGGCCAGCAGGATCGCATGCTCAATGGC GCCAATATTTGGAATCTGCCAGTGTCTTACGATAAGCTAGGTGTGAGGTATAGAATATGG AGAGACGCTGTAGATAGTGGAGAAAAGGAACTACCTTTCAGCAAATAA

Peptide Sequence

PEP ID	Solyc11g012850.2.1
PEP Infomation	Chlorophyllide a oxygenase (AHRD V3.3 *** W9SD87_9ROSA)
Sequence	MTAIATATAISLSLPFSLCRSNKSCTRKFVKGSFGVFAVYGEEGGIPDKKSSWLTLFNVE DPRTKVPQSKGKFLDANQALEVARYDLQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYK SIGTMKKELAELQEELSQAHNQVHISEARVSAALDKLAYMEELVNDRLLQERSTVESECT SSSASTSTGLLDTPKSKQPRRTLNVSGPVQDYSSRLKNFWYPVAFSADLKNDTMLPIDCF EQSWVIFRGADGKPGCVRNTCAHRACPLDLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTR LLNVKIKALPCFEQEGMIWIWPGNDPPAATLPSLLPPSGFQIHAEIVMELPVEHGLLLDN LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS KPGKLEGQSTKQCSTHLHQLHVCLPASRQKTRLLYRMSLDFAPLLKHIPFMQYVWRHFAE QVLNEDLRLVLGQQDRMLNGANIWNLPVSYDKLGVRYRIWRDAVDSGEKELPFSK*

Transcript Sequence

Transcript ID	Solyc11g012850.2.1
Transcript Infomation	Chlorophyllide a oxygenase (AHRD V3.3 *** W9SD87_9ROSA)
Sequence	TAAATTTAAATACAGAAAGAATCATGTGGAGATGGAAAGTGCCACGTGTGAAACATAAGG GTCCCACTTATTTCCACGTGGCAATCTGTGGGAGGTCAATAGAGATTGCGCAGAACACCA ACCTCTTATCTAACCAAAAAAAAAAAAACATTAGAAAAACAGAACAATCTGTTGTTGTTT ACAGCATTTTTCTTAAATAGGTGAAGAGAAGAAAAACAAAAAAATAATCTTTTTTTATCA TGACAGCCATTGCTACTGCTACTGCTATTTCTCTTTCACTTCCTTTCTCTTTGTGCCGCT CTAACAAGTCTTGTACTAGAAAGTTTGTCAAAGGGAGCTTTGGAGTATTTGCTGTGTATG GGGAGGAGGGTGGGATTCCAGATAAGAAAAGTTCCTGGTTGACACTCTTTAATGTGGAAG ATCCCAGGACTAAAGTTCCACAAAGTAAAGGCAAGTTCTTGGATGCAAATCAAGCTTTAG AAGTTGCTAGATATGATCTACAATACTGTGATTGGAGAGCTAGGCAAGATGTACTTACTA TAATGCTGCTACACGAAAAGGTTGTGGAAGTATTAAACCCTCTGGCACGCGATTATAAAT CTATTGGAACCATGAAGAAGGAACTTGCAGAATTGCAAGAAGAACTTTCTCAGGCTCACA ACCAGGTACATATATCAGAGGCCCGGGTTTCTGCTGCTTTAGATAAGCTAGCTTACATGG AAGAATTGGTTAACGATAGGCTTCTGCAAGAGAGAAGCACAGTAGAATCAGAATGCACGT CTTCCTCTGCAAGCACGTCAACAGGATTATTAGACACTCCAAAAAGCAAGCAACCACGAA GAACGCTGAATGTCTCAGGTCCTGTCCAAGATTACAGTTCCCGTTTGAAGAACTTTTGGT ACCCTGTTGCATTCTCCGCAGATCTTAAGAATGACACCATGTTACCGATTGATTGCTTTG AGCAATCGTGGGTGATCTTTCGTGGGGCTGATGGAAAACCTGGATGTGTCCGGAATACAT GTGCACATAGAGCCTGCCCTCTTGATCTTGGCTCAGTAAATGAGGGTCGCATCCAATGCC CTTATCACGGATGGGAGTATTCCACCGACGGGAAGTGTGAGAAAATGCCATCAACAAGAT TACTGAATGTAAAGATCAAAGCACTGCCCTGCTTTGAGCAAGAGGGAATGATATGGATTT GGCCAGGAAATGATCCACCTGCAGCTACCCTTCCTTCTTTACTACCACCTTCTGGATTTC AGATCCATGCTGAGATAGTCATGGAACTTCCAGTGGAACATGGACTACTTTTAGACAATC TTTTAGATCTTGCACACGCACCTTTCACACATACATCAACTTTTGCTAAAGGATGGAGTG TACCAAGCTTGGTAAAGTTCTTGACTCCTGCATCTGGTCTGCAAGGATATTGGGATCCAT ATCCAATAGATATGGAATTTAGACCACCTTGTATGGTTTTATCCACCATTGGCATCTCAA AGCCAGGCAAATTGGAAGGACAGAGTACCAAGCAGTGTTCTACGCACCTTCATCAACTGC ATGTTTGCTTACCTGCATCACGACAGAAAACACGGTTATTATATAGAATGTCACTGGATT TTGCTCCCCTGCTGAAACACATCCCCTTCATGCAATACGTTTGGAGACATTTTGCTGAGC AGGTTTTAAACGAAGACTTACGGCTTGTGCTTGGCCAGCAGGATCGCATGCTCAATGGCG CCAATATTTGGAATCTGCCAGTGTCTTACGATAAGCTAGGTGTGAGGTATAGAATATGGA GAGACGCTGTAGATAGTGGAGAAAAGGAACTACCTTTCAGCAAATAAATATCGTTCTATC AAGAACTGGGTTCTACTTTTCAAGATGACTTTGATCTCTTCATAGTCAGCCCACGCCAAA ATTCAGTCCAGCTGCTGAGAAGCTCTCACTTACTGCAGTTTTCCATATTTTTTCTTGTGA GGAGATACTTCAACTCTACTGTAAATATAGCTGTACACAATTTTTTTGTAGGTTCTTTGT AAGTGTCTAGAGTCCCCCAGCAATGTCGTTCCACCTTGTTATAGCATAATTTCTGATCTC AGATTGCAAGTATTCTTTTTGCCTAACAATAAGTCAGAGATGTTTTGATCTTTGGTAGCA GTTTGAGCTCAGTTGAATCAGTATGATAGTATTGAAATATTATCCTTGTAGTAAGTATAT TATTGTGGTCGATGTTCCTATGCTGAACAAGAGACAAAACTTGATGAAACAATCCATGTT TTCATTTCTGAGTCTTGGCTAGGAAAACTGAGCTCAAAGTTATGCAAGATGACCCTTTAA ACACAGTAGCAGCAGATCCAAGAATCGTGTACTTCTGGACAATATGCAAATGCTCATTAT AGTGTAGATGATGACCCAAACAACATATGGCGTAGTACCCTTGCTGAGTCTTGTGAAAAA TTATTTCTTATGTAATATAACATTATCGAGGAAAAAATTAATTTAATGAAACCAACAACA TAATCAGTGAAACGCCACGTACTCTGCAAATACAAAAATACACTACTAAATCCCATTTTT AGTTTCTACTAAGAATATTGGCTTGGATGGTTTCTACCAGTTTTCCAAGGGTTCAGCTGG CAAACAACAGAGAAATCCAAATCCAAGGTGCTTGCAAACAGAACATTAACCATTTATATA AATTTATACCAGATAATACACTTAATAAGTTCAACAAAATTTACATAGGATTAGCATATA GATACAACATGGCTTTCTTAGAAAGCTACAGCTTAGTAATTAATAGATAGAGTTATCCCA TATACAACTGTGGCAAAAACCTCATCATGTTAGGCAGGCTTCCAAACTGTGAGCACTTCT TGAAACATCTCTAGCATCAGATCTCTATCTGCCTGTCTGAAGAAGTTGTTAATTTCCTCC CTAACATCATAAATCTTGCCAAAATCGAACAAATACATCAAGCAACCTTTTTTCAATTTA TTTAGCTGGTAAAGCCAGGCCTCTTGCAGTCTTTCGAGGACATTACCCGAGTTGATGTCT TCTAGGAGACTTTCCTCACAAGCATTCTTCAAATCTACAATATCATACTTGTTTGCCGCA CCCAGTAATGCCAATCGGTGCTTCCAGAAATCCTCTTGTTTTATGGTTCCATACAAGTAA CTAAGAAGCGCTGTGCATGATTCTGTTGACATGTCTTCTATGTCGATTATAGAGGACTCT TTCTCCCTGAGATCGTGAAGGAACATGCTGTGGAATACAGGAGAAGTAGCAGACAGTATC GCTCTGTGAGCTTGCACTGATCCATCAGCCGTATTAATGGTAACATCAGTATGGATGGAC TCATCAAGCATGCGAGAGAGGCATCGGAGAGTACTTTGGGTAGCTAAAGATTGCAAAATC ATGTCATTGGGCCATATAGATTTTCCTTCTCCACCCTGAAGGTTCAATTACCACAGGTTA CTAAGAGAAGGAACATGAATTCAAAAAAATACTCAAGGTCTTTTATTGGTAAATGCTGAG AAGAAACTTTTCATTCTTTTCCATTTTCTGTAAAATGGAACAATTGGAAAATTTCGTTTT TTCAGTTAAAATCTGCTCAAGGGAACAACCAAAGAATTCAATCACGTAAGCCTATACACC AGCCCTATCTGTTACAACTAGATAGGTAGTTTATCAGAGAACCATTTCATGTAGTAATCT CATATAGTCGTGCATATTAAACACACACTGGAACACTTCAGAATATCAAGAACTCACATT TGGGGTGTAGATCTTCAGGTCAAGGAACTCAACATCAATGACAAATCGACCTTGTAAACA AGAATCAATAGGCCACACAAAGTCATCACTTGTTCGAAGCAGCCTCTCATATACTGCAAA CATGGACCGCCACAGAATTATACATGCAACATAACATGTTGAATATAGTTAATACAGAAT TGTTTATGAAATTCAACTGTGATAGAGGCGAGAAAAGGTGTGATGGACATTAGTTGCAGG CTCTTTATCTGGACAAACAAAGAAAAAAACAAGGAAGCACAAGAGTCTACACTTACATGT GTCTGCATATGCAGCTGAAGAATATTCTATGTGCAACTAAAAAACCGTAACAATACTTAC TAGAAGCATAAATAGCACACGACAGTTAGGCTAGAAATTGTTGGCATATTAATAGCCTAA GGCAGTCCAGAGATAGGATCTTGTCCTACAAGAAAGGGTACAAATTTGATTTATAGCATG TACAGAGAGGTCTTTTCTTAATGAACAAATTGTGTCTTCTCTTCTGGTCAACAAAACAAA AAATTTGACCATATAAAGAAGGAAAATTTATGTGCACCATTAAGGACACTAAACTGCTTT CTCTAATATTTCAGTGCTTTTTATCGACGATAGTCTGAGTTGCCTAAGATAACACCCACC CATCCCCACATCATAGATGCATGCAGCAAACAATTTGATACCCATGACCCATCCCCTAAT ATTACACATGCCATAGTAATTGGCAGTCCAAATGAAAAACATAATGTGAGATGCGTCCAA GAATTCCTTATCAAAGAAATCACAAGTTTCAGAACCAGGCATACATATACATCATGTTTC CTTTTTCATATATGAGCATAACAACTGACCTGATAAATTATTAAGTAGAAATGTCTAAGT TTCCCCCCCTCCAGGAGGAGAGGATTGGGCATTTTTGCTCTATACAAGTAAATTCATCTC TAGCCGCTCAGCGTAGTCCAAATCCATTACCAAATCATCCATAACAGATGGAAATAACCA TGATGAAAATTGACGTAATAGATTAGTTACACTAGTGTGGCAAATAGAGATTTGCAACCA GACCTTTGTGAATAGATCAAGGAGCTAATAAATTGATAAAGATTTGAGAGTTGAATTCAT CCAACATATATTTAATTGTACTACTTTTCCATGTCAATCACCTCGGTCACACTTTATATT ACATCCCTCAATTTTCACAGATACAGATGTCGTTAAACAAAGACACGTTTCTCCAAAACT AGTGATCTTTGCCAGAAGAACAACCAGACCATATCAAAATACAAATTACATCAACCAAAA TGGTGCAATTCGATAGGAAAACCTAATACAACACAGTAATAACAACAAAATGAACTCTGC AAATGCACCAAACAAGCAAAATAACTCAAAAATACATCTTCAAACTTTTGCTAGGTAAAT CGACCTCTGCAACTTGCAATAGTAAATATACTCAAATGGGTACAATCAAAACAGAGAAGA GCTGAAAATAGAGTTTACCAGGAGATATATGAGGTCTCCGATTGGTTCCAGTTGTAGTAA CACGAAGCATAAAGCGAGCAAAAGGAGGAGGAAGCTGCTCTTTCGAAAGCCGAGAAGGTT CAGGAAACAATCGAATATACAAATACCGATTCTTCTCAATTGACAGATGCCTTAATCAAC CATCAACCCAACATGAGAAAAACAAGATGATAAACAGAAATCAAGTAGAAAAAAAAACGA AAAAACATACCAGTTCCATATACCAATTTTAAAAGGGTCAGATCTTTTGTAAGTAGATGC TGTGAAATTGTCGATCCTCCATTGAGCTAACCTTGATAGAGTCTCTACCTTGCTGTCTGT CATCCTCCTTCTTCTTCCCCCTTGACTCTGCTAGTGATGAATCATTATATAAAGTTTTGA TTTTTAGGAATTAACTAAAACTTAAACTGAGAAGAAGTCTTTGCTTTTTGAAAAGGACAT AAGAAAGAAAGTTTTCA