Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g012510.2.1
CDS Infomation

GRAS1
Sequence

ATGCAAACATCTCAGAGAACACAAATGTCTGGAAGTGTTCACGGATTGTACAATCAGCAA
ATGCAGCAAGTTGAGCAGTATTACGCCCCTTACGATGTTCTTAAGAACAGCTGTAAGGAT
AATCGTAGCTCAGGGATGCAATTCTCTTTACAGGCACAAGACGAACAATTCTTCACGCTG
GACTCGTCACCAGCTACCGACTATGTTGTCAACGATTCACCTCCTGCCTTGAGTGTTTCT
TCCAACAGGAGTCCCTTTTCTCCTCAATGTTCACAGTCATACATGTCTGATCTGCATCAC
TCCTCTGATAACACGTGTGGTTCGCCTTTGAGTGGGTGTTCAGGAATTGATGATGGTGAC
TTGAGACATGTGCTTCGGGAGCTGGAGAATAAATTACTGGGGCCTGAATCTGATACTGAC
GACAGCTGCAGTTGCTCCTTGAACGATATGGTCTCAAAACCGTCTTCTGTTACAAGGTGG
AACCGAGTGTTGGACATGGCCCCTGGCTTGAACTTGAAAGAGTTGCTCGATGCCTGTGCT
GAAGCAGTGTCAGATGCTGATATCTCTACTGCTGAAGCTCTTATGAGTGCTTTAGAGCAA
CGGGTGTCTGTGTCTGGGGAACCGATGGAACGATTGGGTGCATACGTGTTGGAAGGGATT
AGAGCACGACTACTATCGTCAGGAAGCATCATATATAAAAAATTGAAGTGCAAAGAACCA
ACTGGCTTGGAACTATTGTCTTACATGCAAGTCATCTTTAACATGTGTCCATACTACAAA
TTTGCTTATATGTCTGCGAATGTCGTCATTAATGAAGCCATGATGAATGAAAACAGAATC
CATATCATTGATTTTCAGATTGCACAGGGAAGTCAGTGGATGTTCCTCCTCCACTATCTT
GCTCATCGTCCTGGTGGACCCCCATTTGTCCGCATCACAGGTGTTGATGACGACGAATCA
GCTTATGCTCGGGGTGGAGGACTTCAGCTAGTAGGCAAAAGGCTAGCAGAAGTTGCCAAA
TCATGTGGAGTGCCTTTTGAATTCCATGGTGCTGCACTATCAGGCTGTGAGGTCCAACTA
GAGAACCTTCGGGTTAAACATGGAGAAGCTCTGGCAGTAAACTTCCCTTATATGCTGCAC
CACATGCCAGACGAGAGTGTAAGTACTATCAATCATCGTGACCGCTTATTAAGACTAGTT
AAGAGTTTATCCCCCAAAATTGTGACCTTAGTTGAACAAGAATCAAACACCAACACCGCC
CCTTTCCTTCCAAGGTTCCGTGAAACTCTTGATTACTATACAGCAATGTTCGAATCAATT
GATGCAGCTCGTCCTAGGGATGACAAGGAGAGGATCAGTGCAGAGGAGCATTGTGTGGCA
CGAGATGTTGTGAACATAATAGCATGTGAGGGAGCTGACAGAGTGGAAAGACATGAACTT
TTCGGAAAATGGAGGTTAAGACTTATGATGGCTGGATTTACTCAATGTCAATTGAGTCCA
TCAGTTGGTGAGACCATAAAGCACATGTTGAAAGAGTACAGCCCTAATTATCGGTATGCA
GAAGGCGAAGGAGCACTCTATCTTGGATGGAAAAATAGAGCTTTAGCAACTTCCTCTGCC
TGGAGATGA

Peptide Sequence

PEP ID

Solyc11g012510.2.1
PEP Infomation

GRAS1
Sequence

MQTSQRTQMSGSVHGLYNQQMQQVEQYYAPYDVLKNSCKDNRSSGMQFSLQAQDEQFFTL
DSSPATDYVVNDSPPALSVSSNRSPFSPQCSQSYMSDLHHSSDNTCGSPLSGCSGIDDGD
LRHVLRELENKLLGPESDTDDSCSCSLNDMVSKPSSVTRWNRVLDMAPGLNLKELLDACA
EAVSDADISTAEALMSALEQRVSVSGEPMERLGAYVLEGIRARLLSSGSIIYKKLKCKEP
TGLELLSYMQVIFNMCPYYKFAYMSANVVINEAMMNENRIHIIDFQIAQGSQWMFLLHYL
AHRPGGPPFVRITGVDDDESAYARGGGLQLVGKRLAEVAKSCGVPFEFHGAALSGCEVQL
ENLRVKHGEALAVNFPYMLHHMPDESVSTINHRDRLLRLVKSLSPKIVTLVEQESNTNTA
PFLPRFRETLDYYTAMFESIDAARPRDDKERISAEEHCVARDVVNIIACEGADRVERHEL
FGKWRLRLMMAGFTQCQLSPSVGETIKHMLKEYSPNYRYAEGEGALYLGWKNRALATSSA
WR*

Transcript Sequence

Transcript ID

Solyc11g012510.2.1
Transcript Infomation

GRAS1
Sequence

AACACTTCATTCTTTGTTTTCAACAATTAACAATAGACATAAGAGCTGATCTTTGAACAA
AAAAGTCTCAATTCATCACAAAAATACAAAAATTACATCCTCTTAACTTTCAAGGTTCTG
TTAGGCATCATCAGAGTTGCAAATTTCTTTTCGAGTTTACATTGTGACACGATTTTGAAA
GAGTTGTTGTTGCTTGAGATGTTGTGAATGACTACTTTTAGTCGAGAGAGGTTTGCTGAG
ATCTAAGATTAGCTTTTGTCTGCAACGGTTGCTTGAAATCCGATAGTCATTTTGAGATGC
AAACATCTCAGAGAACACAAATGTCTGGAAGTGTTCACGGATTGTACAATCAGCAAATGC
AGCAAGTTGAGCAGTATTACGCCCCTTACGATGTTCTTAAGAACAGCTGTAAGGATAATC
GTAGCTCAGGGATGCAATTCTCTTTACAGGCACAAGACGAACAATTCTTCACGCTGGACT
CGTCACCAGCTACCGACTATGTTGTCAACGATTCACCTCCTGCCTTGAGTGTTTCTTCCA
ACAGGAGTCCCTTTTCTCCTCAATGTTCACAGTCATACATGTCTGATCTGCATCACTCCT
CTGATAACACGTGTGGTTCGCCTTTGAGTGGGTGTTCAGGAATTGATGATGGTGACTTGA
GACATGTGCTTCGGGAGCTGGAGAATAAATTACTGGGGCCTGAATCTGATACTGACGACA
GCTGCAGTTGCTCCTTGAACGATATGGTCTCAAAACCGTCTTCTGTTACAAGGTGGAACC
GAGTGTTGGACATGGCCCCTGGCTTGAACTTGAAAGAGTTGCTCGATGCCTGTGCTGAAG
CAGTGTCAGATGCTGATATCTCTACTGCTGAAGCTCTTATGAGTGCTTTAGAGCAACGGG
TGTCTGTGTCTGGGGAACCGATGGAACGATTGGGTGCATACGTGTTGGAAGGGATTAGAG
CACGACTACTATCGTCAGGAAGCATCATATATAAAAAATTGAAGTGCAAAGAACCAACTG
GCTTGGAACTATTGTCTTACATGCAAGTCATCTTTAACATGTGTCCATACTACAAATTTG
CTTATATGTCTGCGAATGTCGTCATTAATGAAGCCATGATGAATGAAAACAGAATCCATA
TCATTGATTTTCAGATTGCACAGGGAAGTCAGTGGATGTTCCTCCTCCACTATCTTGCTC
ATCGTCCTGGTGGACCCCCATTTGTCCGCATCACAGGTGTTGATGACGACGAATCAGCTT
ATGCTCGGGGTGGAGGACTTCAGCTAGTAGGCAAAAGGCTAGCAGAAGTTGCCAAATCAT
GTGGAGTGCCTTTTGAATTCCATGGTGCTGCACTATCAGGCTGTGAGGTCCAACTAGAGA
ACCTTCGGGTTAAACATGGAGAAGCTCTGGCAGTAAACTTCCCTTATATGCTGCACCACA
TGCCAGACGAGAGTGTAAGTACTATCAATCATCGTGACCGCTTATTAAGACTAGTTAAGA
GTTTATCCCCCAAAATTGTGACCTTAGTTGAACAAGAATCAAACACCAACACCGCCCCTT
TCCTTCCAAGGTTCCGTGAAACTCTTGATTACTATACAGCAATGTTCGAATCAATTGATG
CAGCTCGTCCTAGGGATGACAAGGAGAGGATCAGTGCAGAGGAGCATTGTGTGGCACGAG
ATGTTGTGAACATAATAGCATGTGAGGGAGCTGACAGAGTGGAAAGACATGAACTTTTCG
GAAAATGGAGGTTAAGACTTATGATGGCTGGATTTACTCAATGTCAATTGAGTCCATCAG
TTGGTGAGACCATAAAGCACATGTTGAAAGAGTACAGCCCTAATTATCGGTATGCAGAAG
GCGAAGGAGCACTCTATCTTGGATGGAAAAATAGAGCTTTAGCAACTTCCTCTGCCTGGA
GATGACATTTTTTGCCCTATGATCTCGTCGTTTCATCTTCATAACTTCTCGTTTCATATA
TACAGACTGGTCACTCAACTTTGAGTTGTTTACTCAGAAAGTCACTCAACTTTGAGTTGT
TTACTTAGAAAGTCACTCAACTTTATTTTGTAACTCAAAACTCATTAAACTATTGA