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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g012190.2.1
CDS Infomation

Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_ORYSJ)
Sequence

ATGGGTTTTGTTGGGGTTAATGAAACTAGATTTTTCATCAAGAATGAAAATCCAAAGACT
CAATCTTTATCATTTAAAGATTTGTATATTAATGGTTGGAATTCTTATTGGTTAATGGAG
GAAAGTGTTTGGGTATCTTCAAGATTTAGGGTTTCTAAGATGTTGAAAAGAGGAGCTGAA
ATGGGGTTAAGTGTTTGTAGGACTTGGGCTTTTAGTGATGGTGGTGGACCTAATGATCTT
CAGCTACTTCCAGGAGTCTTCAATGAAAGAGTCTTTAAGGGATTAGATTTTGTCATTGTT
GAGGCAAGGAAGCATAACATTCGATTAATCCTCAGTCTTGTAAACAATTTAAAAGCATAT
GGTGGCACTGCTCAATATATGAGGTGGGCGCGAGAAGCTGGTACCAATGTGTCATCATCA
AGAGATGCATTCTTTACCAATCCAACGGTCAAAGCATACTACAAGTCTTTTGTCAAGGCA
ATTGTGACAAGAAAAAACTCTTTAAGTGGAGTTAAATATTCAGAAGAACCGGCTATATTT
GCGTGGGAACTCATAAATGAGCCTCGTTGTGAATCCAGTTCATCAGCTGCTGCTCTGCAG
GTGTGGATAGCAGAGATGGCTGGATTTGTCAAAAGTTTGGATCAGAAGCATCTCGTGACC
ATTGGACTAGAGGGCTTTTATGGTGCGGAGAAAACTGAAAACGTTGGATTGAACCCAGGG
AAATGGGCTGAATCACTTGGAGTGGACTTCATTGAGAACTCGGCTATTGAAAACATTGAT
TTTACTTCCGTTCATGCATACCCCCACAGTTGGATCAAAGGTGGTATAAATTCAGATGCG
AGATTAGATTTTCTATCTCATTGGGTTGATTCTCACATTAGTGAAGCTGAAAAGATCCTT
AAGAAGCCTGTTCTCTTCACAGAAGTTGGTTTTCCTTCGAGTATACAAAAGAATGGATTA
TACGACAGAAATATTTTTCTAAAAATAGTTTATGAAAAGATTTACGAGTCAGCAAAGAAG
AAGAAAGCTGGTGCAGGAGCCTTGGTTTGGCAGCTATTAGTGGAAGGAATGGAACGATAT
GGTGACCAGTTCTCGTTTATTGCCTGGAAGCATCCCTCTACCTATAAACTGATGGTAGAA
CAATCCTGCAGGCTACTCAACATATCTTCTCAAGGCCTCACAGACAAAAAACTCAATCAA
AAGAATCATTGTTCAGCTAATGCATCTTAA

Peptide Sequence

PEP ID

Solyc11g012190.2.1
PEP Infomation

Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_ORYSJ)
Sequence

MGFVGVNETRFFIKNENPKTQSLSFKDLYINGWNSYWLMEESVWVSSRFRVSKMLKRGAE
MGLSVCRTWAFSDGGGPNDLQLLPGVFNERVFKGLDFVIVEARKHNIRLILSLVNNLKAY
GGTAQYMRWAREAGTNVSSSRDAFFTNPTVKAYYKSFVKAIVTRKNSLSGVKYSEEPAIF
AWELINEPRCESSSSAAALQVWIAEMAGFVKSLDQKHLVTIGLEGFYGAEKTENVGLNPG
KWAESLGVDFIENSAIENIDFTSVHAYPHSWIKGGINSDARLDFLSHWVDSHISEAEKIL
KKPVLFTEVGFPSSIQKNGLYDRNIFLKIVYEKIYESAKKKKAGAGALVWQLLVEGMERY
GDQFSFIAWKHPSTYKLMVEQSCRLLNISSQGLTDKKLNQKNHCSANAS*

Transcript Sequence

Transcript ID

Solyc11g012190.2.1
Transcript Infomation

Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_ORYSJ)
Sequence

CCACAAATCTTTGTAACACAACCTTATATGGGTTTTGTTGGGGTTAATGAAACTAGATTT
TTCATCAAGAATGAAAATCCAAAGACTCAATCTTTATCATTTAAAGATTTGTATATTAAT
GGTTGGAATTCTTATTGGTTAATGGAGGAAAGTGTTTGGGTATCTTCAAGATTTAGGGTT
TCTAAGATGTTGAAAAGAGGAGCTGAAATGGGGTTAAGTGTTTGTAGGACTTGGGCTTTT
AGTGATGGTGGTGGACCTAATGATCTTCAGCTACTTCCAGGAGTCTTCAATGAAAGAGTC
TTTAAGGGATTAGATTTTGTCATTGTTGAGGCAAGGAAGCATAACATTCGATTAATCCTC
AGTCTTGTAAACAATTTAAAAGCATATGGTGGCACTGCTCAATATATGAGGTGGGCGCGA
GAAGCTGGTACCAATGTGTCATCATCAAGAGATGCATTCTTTACCAATCCAACGGTCAAA
GCATACTACAAGTCTTTTGTCAAGGCAATTGTGACAAGAAAAAACTCTTTAAGTGGAGTT
AAATATTCAGAAGAACCGGCTATATTTGCGTGGGAACTCATAAATGAGCCTCGTTGTGAA
TCCAGTTCATCAGCTGCTGCTCTGCAGGTGTGGATAGCAGAGATGGCTGGATTTGTCAAA
AGTTTGGATCAGAAGCATCTCGTGACCATTGGACTAGAGGGCTTTTATGGTGCGGAGAAA
ACTGAAAACGTTGGATTGAACCCAGGGAAATGGGCTGAATCACTTGGAGTGGACTTCATT
GAGAACTCGGCTATTGAAAACATTGATTTTACTTCCGTTCATGCATACCCCCACAGTTGG
ATCAAAGGTGGTATAAATTCAGATGCGAGATTAGATTTTCTATCTCATTGGGTTGATTCT
CACATTAGTGAAGCTGAAAAGATCCTTAAGAAGCCTGTTCTCTTCACAGAAGTTGGTTTT
CCTTCGAGTATACAAAAGAATGGATTATACGACAGAAATATTTTTCTAAAAATAGTTTAT
GAAAAGATTTACGAGTCAGCAAAGAAGAAGAAAGCTGGTGCAGGAGCCTTGGTTTGGCAG
CTATTAGTGGAAGGAATGGAACGATATGGTGACCAGTTCTCGTTTATTGCCTGGAAGCAT
CCCTCTACCTATAAACTGATGGTAGAACAATCCTGCAGGCTACTCAACATATCTTCTCAA
GGCCTCACAGACAAAAAACTCAATCAAAAGAATCATTGTTCAGCTAATGCATCTTAAATA
TGAAATGTTTCCTATTCATTCATCTTCCTCGAGAAGACGGACATTATAGGAGAAACAATG
TAATGTACTTCGGCTGAACATCTTCCAGATCTTAGAAATGAGCCAAACAGAGAGTTTGGA
GTGATTTGAAGTTGTGATATTGCTCGAGGACATGTAAGAAGCTTCAGCTCAATGAGTGCA
AGAACCAGATTTTTTTCTTTAGTACAGGCGTGAATTCGAAATTCTGTTGGTGTATATTTA
TAATCTCAGTTGTACATATACATTACAATTACAAGAGTAATAGCAATGTGAGTGGTTTGT
TCATTTTCAATGAAATAATAAGATATTGACCAGAATCT