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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g012010.2.1
CDS Infomation

RPM1 interacting protein 4, putative (AHRD V3.3 *** A0A061GGZ7_THECC)
Sequence

ATGGCTGGATCACATGTTCCAAAATTTGGGAATTGGGATGGCGAAAATGTGCCATACACA
GCTTATTTTGAGAATGCGCGCAAAAGTAATAGTAAAGGAGGTAAAATGATAAATCCAAAT
GATCCAGAGGAGAATCCAGAGGCCTTTGCATATTGCGGAGATGAGGATGCTAACATTAAC
ATTTCTCCTTTAGTTGAAAAACATCAGTACCATTATGATCATCGCAGAAATCCTTCTGTA
GAGTCGGGCCAAAACAAGAGTATTGGCCCGACTAATTCAAATTCGGAGTCCTTTGGGGAT
AGTCAAAGGAAGAGCGTTTCTGGGTTTTCAGTTAACCAACCAACACGACGAAGAAGAACA
TCTGATGTTAAGAAGAATAAGAACGATCGTGGCAATGGATTCGTTCCTCCTAGTCCGAAT
AGACCGATGAAAAATAGTAGAAATCCATCTGATGATCTTTCTTGTTCATCAGCAGCATCA
GTACCAAAATTTGGGGCATGGGATGAGAAAGACCCGAAATCGGGAGAAGGATTTACAGTA
ATTTTCAACAAAGTTAAAGAGGAAAAGCATATAGCAGCTGCAAAGTTCCCTGTTGTGCAG
CCACAATCAAACATGTCTTCATCAAATAATCACAAAAAAAATGCTAAATCAAAGGTGTTT
TGTTGCCTTTTTTGA

Peptide Sequence

PEP ID

Solyc11g012010.2.1
PEP Infomation

RPM1 interacting protein 4, putative (AHRD V3.3 *** A0A061GGZ7_THECC)
Sequence

MAGSHVPKFGNWDGENVPYTAYFENARKSNSKGGKMINPNDPEENPEAFAYCGDEDANIN
ISPLVEKHQYHYDHRRNPSVESGQNKSIGPTNSNSESFGDSQRKSVSGFSVNQPTRRRRT
SDVKKNKNDRGNGFVPPSPNRPMKNSRNPSDDLSCSSAASVPKFGAWDEKDPKSGEGFTV
IFNKVKEEKHIAAAKFPVVQPQSNMSSSNNHKKNAKSKVFCCLF*

Transcript Sequence

Transcript ID

Solyc11g012010.2.1
Transcript Infomation

RPM1 interacting protein 4, putative (AHRD V3.3 *** A0A061GGZ7_THECC)
Sequence

GAAGAAGAAATTAAACTTCAATATCAGTCATGGCTGGATCACATGTTCCAAAATTTGGGA
ATTGGGATGGCGAAAATGTGCCATACACAGCTTATTTTGAGAATGCGCGCAAAAGTAATA
GTAAAGGAGGTAAAATGATAAATCCAAATGATCCAGAGGAGAATCCAGAGGCCTTTGCAT
ATTGCGGAGATGAGGATGCTAACATTAACATTTCTCCTTTAGTTGAAAAACATCAGTACC
ATTATGATCATCGCAGAAATCCTTCTGTAGAGTCGGGCCAAAACAAGAGTATTGGCCCGA
CTAATTCAAATTCGGAGTCCTTTGGGGATAGTCAAAGGAAGAGCGTTTCTGGGTTTTCAG
TTAACCAACCAACACGACGAAGAAGAACATCTGATGTTAAGAAGAATAAGAACGATCGTG
GCAATGGATTCGTTCCTCCTAGTCCGAATAGACCGATGAAAAATAGTAGAAATCCATCTG
ATGATCTTTCTTGTTCATCAGCAGCATCAGTACCAAAATTTGGGGCATGGGATGAGAAAG
ACCCGAAATCGGGAGAAGGATTTACAGTAATTTTCAACAAAGTTAAAGAGGAAAAGCATA
TAGCAGCTGCAAAGTTCCCTGTTGTGCAGCCACAATCAAACATGTCTTCATCAAATAATC
ACAAAAAAAATGCTAAATCAAAGGTGTTTTGTTGCCTTTTTTGAAGATCTACATGCTCTA
AGTTAACAAGAAAAAAGAGTTGTATTAGTGTTTTGCTTAGAAGGGTGCATTGACTAAGTA
TTTGTATTAATGTTTTCTTGTAGTTGTGGAAAGAACAATTAGTTACACTTAATCCATATT
TTGGTCATGATATGTTAGAATAATTTGAAATATAACATGGTAAGATAGATAAGA