Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g011990.2.1
CDS Infomation

plastid terminal oxidase
Sequence

ATGGCGATTTCGATTTCTGCTATGAGTTTTGGAACCTCAGTTTCTTCATATTCTTGTTTT
AGAGCTAGGAGTTTTGAGAAGTCATCAGTTTTATGCAATTCCCAGAACCCATGTCGGTTT
AATTCTGTTTTTCCGATTCGGAAATCTGATGGGGCTTCACGGTGTTCTGTTTCTAGGAAA
TCATGTAGAGTTCGAGCAACGTTGTTACAAGAGAATGAAGAAGAAGTGGTTGTGGAGAAA
TCTTTTGCACCTAAGAGTTTTCCTGATAACGTGGGAGGGGGAAGTAATGGGAAGCCACCA
GATGATTCATCCTCTAACGGTCTAGAGAAATGGGTTATAAAGCTTGAGCAGTCTGTAAAT
ATCTTACTCACGGATTCAGTGATAAAGATTCTTGACACTTTGTATCACAACCGAAACTAT
GCGAGGTTTTTTGTTCTGGAAACAATTGCAAGGGTTCCTTATTTTGCATTTATATCGGTT
CTTCACATGTATGAGAGCTTTGGCTGGTGGAGAAGGGCAGATTATATGAAAGTGCATTTT
GCTGAAAGCTGGAATGAGATGCACCATTTGCTCATTATGGAAGAATTAGGGGGAAATGCT
TGGTGGTTTGATCGATTTCTTGCACAACATATAGCTATATTCTATTATTTCATGACAGTC
TTGATGTATGCTTTGAGCCCGAGAATGGCATATCATTTCTCTGAATGTGTGGAGAGCCAT
GCATACGAGACTTACGATAAATTCATCAAGGATCAAGGAGAGGAATTGAAGAATTTGCCC
GCTCCAAAGATTGCAGTGGACTACTACACGGGAGGTGACTTATATTTATTTGATGAGTTT
CAAACTTCACGAGAGCCTAATACTCGAAGACCAAAAATAGATAATCTCTATGACGTATTC
ATGAACATTAGAGATGACGAAGCAGAGCATTGTAAAACGATGAAAGCCTGTCAAACTCAC
GGGAGCCTTCGTTCTCCACACACAGATCCATGCGATGATTCTGAAGATGATACAGGGTGT
TCCGTACCTCAAGCTGATTGTATAGGTATCGTGGATTGTATAAAGAAGTCAGTCACCGAT
ACTCAAGTAACCAAAAGGTAG

Peptide Sequence

PEP ID

Solyc11g011990.2.1
PEP Infomation

plastid terminal oxidase
Sequence

MAISISAMSFGTSVSSYSCFRARSFEKSSVLCNSQNPCRFNSVFPIRKSDGASRCSVSRK
SCRVRATLLQENEEEVVVEKSFAPKSFPDNVGGGSNGKPPDDSSSNGLEKWVIKLEQSVN
ILLTDSVIKILDTLYHNRNYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYMKVHF
AESWNEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTVLMYALSPRMAYHFSECVESH
AYETYDKFIKDQGEELKNLPAPKIAVDYYTGGDLYLFDEFQTSREPNTRRPKIDNLYDVF
MNIRDDEAEHCKTMKACQTHGSLRSPHTDPCDDSEDDTGCSVPQADCIGIVDCIKKSVTD
TQVTKR*

Transcript Sequence

Transcript ID

Solyc11g011990.2.1
Transcript Infomation

plastid terminal oxidase
Sequence

CCAAACTTTTCCAATTCCATCGCACTTTTTTTCCAGTGGACAAAGCTGTTTGGTTTCTCA
GAAAACTAACAACTTTCCCACTTTGGAATTTTCTTTACCTTACCTAAGAAGGGTATTAAT
TTGATTCTTGTGGGAAGGAAGAAGGATCAAGAATGGCGATTTCGATTTCTGCTATGAGTT
TTGGAACCTCAGTTTCTTCATATTCTTGTTTTAGAGCTAGGAGTTTTGAGAAGTCATCAG
TTTTATGCAATTCCCAGAACCCATGTCGGTTTAATTCTGTTTTTCCGATTCGGAAATCTG
ATGGGGCTTCACGGTGTTCTGTTTCTAGGAAATCATGTAGAGTTCGAGCAACGTTGTTAC
AAGAGAATGAAGAAGAAGTGGTTGTGGAGAAATCTTTTGCACCTAAGAGTTTTCCTGATA
ACGTGGGAGGGGGAAGTAATGGGAAGCCACCAGATGATTCATCCTCTAACGGTCTAGAGA
AATGGGTTATAAAGCTTGAGCAGTCTGTAAATATCTTACTCACGGATTCAGTGATAAAGA
TTCTTGACACTTTGTATCACAACCGAAACTATGCGAGGTTTTTTGTTCTGGAAACAATTG
CAAGGGTTCCTTATTTTGCATTTATATCGGTTCTTCACATGTATGAGAGCTTTGGCTGGT
GGAGAAGGGCAGATTATATGAAAGTGCATTTTGCTGAAAGCTGGAATGAGATGCACCATT
TGCTCATTATGGAAGAATTAGGGGGAAATGCTTGGTGGTTTGATCGATTTCTTGCACAAC
ATATAGCTATATTCTATTATTTCATGACAGTCTTGATGTATGCTTTGAGCCCGAGAATGG
CATATCATTTCTCTGAATGTGTGGAGAGCCATGCATACGAGACTTACGATAAATTCATCA
AGGATCAAGGAGAGGAATTGAAGAATTTGCCCGCTCCAAAGATTGCAGTGGACTACTACA
CGGGAGGTGACTTATATTTATTTGATGAGTTTCAAACTTCACGAGAGCCTAATACTCGAA
GACCAAAAATAGATAATCTCTATGACGTATTCATGAACATTAGAGATGACGAAGCAGAGC
ATTGTAAAACGATGAAAGCCTGTCAAACTCACGGGAGCCTTCGTTCTCCACACACAGATC
CATGCGATGATTCTGAAGATGATACAGGGTGTTCCGTACCTCAAGCTGATTGTATAGGTA
TCGTGGATTGTATAAAGAAGTCAGTCACCGATACTCAAGTAACCAAAAGGTAGGAAAAGG
AAAAACGCGGACAAACTATACTTGTATATACTAGTATAGACAAAAAAAAAAATACAAAGA
TATAGGTACATGTTGTATCTTTTTGTCTGAGGTAGAGATGTTTTGGAAAGTTTTCAAGGC
AAAATACATAGTTTACCTCATGTAAGCTCTCCTTACTAAGATTGTTTTTATATTTAGAAT
TTGTACCCGAAACCTGTTATAGGTGGATGGATCTTGACAACTTTTGGATATATCGACTCC
ATGAGCTTTTTACACACGCAACAATATGTTACCCTTTAGCCCGTGACAAGCTCAGCTACA
GAGTTAAGTTATGTGTACACCATAATAGGAAATGAGATTGTGCTCCATGTTTCTTGTTCG
CGGAGATGAATTGATATATTTATTGAATAAGCTTGAAACCGGAGTTTTGTGCAACTTCGG
GAAAAATAGATATGAATACTAAGTTAGATTTAATATTTTG