Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g011340.2.1
CDS Infomation

cultivar Rio Grande ELI3
Sequence

ATGGCAAAATCATTTGAAAATGAACATCCAATTAAGGCATTTGGATGGGCAACTAGAGAC
ACTTCTGGAGTTCTTTCTCCTTTCAATTTTTCAAGAAGAGTGACAGGTGAAAAAGATGTG
CAATTTAAAGTTATGTATTGTGGAATTTGTCATTCTGATCTTCATCAACTCAAGAATGAA
TGGGGAAATAGCAAGTACCCCATGGTGCCTGGGCATGAGGTTGTTGGTGTTGTCACTGAG
GTTGGAAGCAAGGTGGAGAAGTTTAAGGTTGGAGACAAAGTAGGTGTTGGATGTATGGTA
GGATCATGTCGAAAATGTGAGAATTGTAGCGTTGATCTCGAGAATTACTGTCCTCGTCAG
ATTCCTACTTACAACGGCTATAGCTTAGACGGAACCCTCACGTTTGGAGGTTACTCCGAT
GTGATGGTATCCGATGAGCATTTTGTAGTACGTTGGCCTGAAAACTTGTCGATGGACGCT
GCTCCCCTGTTATGTGCTGGAATTACGACTTATAGTCCTTTGAAATATTTTGGACTCGAT
AAGCCTGGAATGCACATTGGTGTTGTTGGTCTTGGAGGGCTTGGACATATGGCTGTTAAG
TTTGCTAAGGCATTCGGAACCAAAGTGACTGTCATCAGTACATCTGCTAATAAGAAGAAA
GAAGCAATTGAGCGTTTGGGTGCAGACTCTTTCTTGATCAGTCGCGATCCTGAGCAGATG
AAGGCTGCAATGAACACATTGGATGGGATTATCGACACTGTATCTGTCGTGCACCCTATT
CTTCCATTACTTATGTTGATGAAATCTCATGGTAAGCTTGTTATGGTTGGTGCACCAGAA
AAACCGGTGGAGTTGCCCGTGTTTCCTCTACTTATGGGAAGGAAGCTAGTGGCTGGAAGT
TGCATAGGAGGGATGAAAGAGACTCAAGAAATGTTGGACTTTGCGGCAAAGCATAACATA
ACACCAGATATTGAAGTGGTGCCAATGGAGTACGTTAACACCGCGTTGGAACGTCTTTTG
AAATCGGACGTGAAATATCGTTTTGTGCTAGACATTGGTAATACATTGAACAAGAAATGA

Peptide Sequence

PEP ID

Solyc11g011340.2.1
PEP Infomation

cultivar Rio Grande ELI3
Sequence

MAKSFENEHPIKAFGWATRDTSGVLSPFNFSRRVTGEKDVQFKVMYCGICHSDLHQLKNE
WGNSKYPMVPGHEVVGVVTEVGSKVEKFKVGDKVGVGCMVGSCRKCENCSVDLENYCPRQ
IPTYNGYSLDGTLTFGGYSDVMVSDEHFVVRWPENLSMDAAPLLCAGITTYSPLKYFGLD
KPGMHIGVVGLGGLGHMAVKFAKAFGTKVTVISTSANKKKEAIERLGADSFLISRDPEQM
KAAMNTLDGIIDTVSVVHPILPLLMLMKSHGKLVMVGAPEKPVELPVFPLLMGRKLVAGS
CIGGMKETQEMLDFAAKHNITPDIEVVPMEYVNTALERLLKSDVKYRFVLDIGNTLNKK*

Transcript Sequence

Transcript ID

Solyc11g011340.2.1
Transcript Infomation

cultivar Rio Grande ELI3
Sequence

GTATCATCAATATTTTCTACATTCTTCTCTATTATAATAATTTATTTACTATACATACAC
TACAAAAATATTTTTATTTTCAAACGAAAAAAATGGCAAAATCATTTGAAAATGAACATC
CAATTAAGGCATTTGGATGGGCAACTAGAGACACTTCTGGAGTTCTTTCTCCTTTCAATT
TTTCAAGAAGAGTGACAGGTGAAAAAGATGTGCAATTTAAAGTTATGTATTGTGGAATTT
GTCATTCTGATCTTCATCAACTCAAGAATGAATGGGGAAATAGCAAGTACCCCATGGTGC
CTGGGCATGAGGTTGTTGGTGTTGTCACTGAGGTTGGAAGCAAGGTGGAGAAGTTTAAGG
TTGGAGACAAAGTAGGTGTTGGATGTATGGTAGGATCATGTCGAAAATGTGAGAATTGTA
GCGTTGATCTCGAGAATTACTGTCCTCGTCAGATTCCTACTTACAACGGCTATAGCTTAG
ACGGAACCCTCACGTTTGGAGGTTACTCCGATGTGATGGTATCCGATGAGCATTTTGTAG
TACGTTGGCCTGAAAACTTGTCGATGGACGCTGCTCCCCTGTTATGTGCTGGAATTACGA
CTTATAGTCCTTTGAAATATTTTGGACTCGATAAGCCTGGAATGCACATTGGTGTTGTTG
GTCTTGGAGGGCTTGGACATATGGCTGTTAAGTTTGCTAAGGCATTCGGAACCAAAGTGA
CTGTCATCAGTACATCTGCTAATAAGAAGAAAGAAGCAATTGAGCGTTTGGGTGCAGACT
CTTTCTTGATCAGTCGCGATCCTGAGCAGATGAAGGCTGCAATGAACACATTGGATGGGA
TTATCGACACTGTATCTGTCGTGCACCCTATTCTTCCATTACTTATGTTGATGAAATCTC
ATGGTAAGCTTGTTATGGTTGGTGCACCAGAAAAACCGGTGGAGTTGCCCGTGTTTCCTC
TACTTATGGGAAGGAAGCTAGTGGCTGGAAGTTGCATAGGAGGGATGAAAGAGACTCAAG
AAATGTTGGACTTTGCGGCAAAGCATAACATAACACCAGATATTGAAGTGGTGCCAATGG
AGTACGTTAACACCGCGTTGGAACGTCTTTTGAAATCGGACGTGAAATATCGTTTTGTGC
TAGACATTGGTAATACATTGAACAAGAAATGAGAATAGGGAGGGGATCAATTATGTAGCT
AGCAGTGTTTCCTCCATCATCTATTTATACTGCAGTAACTGAGATTTAGTGAATACCTTA
CAGAATAACAACCCTTTGCCTTTACTCTATTAACTAAGTGAAATCCGTATATCTCTGATA
CATCTTTTCACATGAAAATCATACAACAAAGTCAAATTCTGAACTTAGTACTCAAGAAGA
CAGCTTGCACTAATGAATTATGACGGAACACCAAGATATGATGCAAGTTGCAAGATGACA
CTGTACTTTTTCCTCAAAAAAATGACACAGAGTACTCCACAAGCTGTCACTTTGATTTTA
AAAAATACATCTATTTCTTTTCTTTCCAACT