Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g011260.1.1
CDS Infomation

GAI
Sequence

ATGAAGAGAGATCGAGATCGAGATCGAGAAAGAGAGAAAAGAGCATTCTCTAATGGTGCT
GTTTCTTCAGGGAAAAGTAAGATTTGGGAAGAAGATGAAGAAGAAAAACCAGATGCTGGA
ATGGATGAGCTTTTAGCTGTTTTGGGTTATAAAGTGAAGTCGTCTGATATGGCGGATGTT
GCTCAAAAACTTGAACAGCTTGAGATGGCTATGGGTACAACGATGGAAGATGGTATTACT
CATCTTTCTACTGATACCGTTCATAAAAACCCATCTGATATGGCTGGTTGGGTACAAAGT
ATGTTATCTTCGATTTCGACAAACTTTGATATGTGTAATCAGGAAAACGATGTGCTTGTA
TCTGGTTGTGGTTCTTCTTCTTCTATAATCGATTTCTCACAAAATCATCGAACAAGTACC
ATTTCTGATGATGATTTAAGAGCTATACCTGGTGGTGCTGTTTTCAATTCGGATAGTAAT
AAAAGACACAGATCAACAACTTCTAGTTTTTCAACTACATCCTCATCTATGGTGACAGAT
TCATCAGCAACGAGACCTGTTGTACTAGTTGATTCACAAGAAACTGGGGTTCGTCTTGTT
CATACTTTAATGGCGTGTGCTGAAGCTGTACAACAAGAAAATTTAACTTTAGCGGATCAA
CTTGTTAGACATATTGGTATTCTTGCGGTTTCACAATCTGGTGCTATGAGAAAAGTTGCT
ACTTACTTTGCTGAAGCATTAGCAAGAAGAATCTACAAAATTTATCCACAAGATTCAATG
GAATCATCATATACAGATGTTTTACAAATGCATTTCTATGAAACTTGCCCTTATCTCAAA
TTCGCTCATTTTACTGCTAATCAAGCCATTCTTGAAGCGTTTACAGGTTGTAACAAAGTT
CATGTAATTGATTTCAGCTTAAAACAGGGTATGCAATGGCCTGCACTTATGCAAGCTTTA
GCTTTACGCCCCGGTGGACCTCCGGCATTTAGACTCACCGGAATCGGACCTCCACAGCCG
GATAACACAGATGCCTTGCAACAAGTTGGATGGAAGTTAGCTCAGTTAGCGGAAACTATT
GGGGTTGAATTTGAATTCAGGGGATTTGTTGCTAATTCATTAGCAGATCTTGATGCGACT
ATACTTGATATAAGGCCAAGTGAAACTGAAGCAGTAGCTATAAACTCTGTTTTTGAGCTT
CATCGATTGTTATCCCGGCCGGGAGCAATTGAAAAAGTGTTGAACTCTATTAAACAGATT
AACCCGAAGATTGTTACTCTTGTTGAGCAAGAAGCGAATCATAACGCAGGGGTTTTTATT
GATAGATTTAACGAAGCTTTGCATTATTACTCAACCATGTTTGATTCGTTAGAAAGCTCT
GGGTCTTCGTCTTCAGCTTCACCAACTGGGATTCTTCCTCAACCTCCGGTGAACAATCAA
GATTTGGTGATGTCGGAGGTTTATTTAGGGAGACAGATTTGTAACGTGGTGGCTTGTGAA
GGTTCAGATCGAGTTGAACGACATGAAACACTGAATCAATGGAGGGTTAGGATGAACTCA
TCTGGGTTCGATCCGGTTCATCTGGGTTCAAATGCGTTCAAACAAGCTTCCATGCTTTTA
GCTCTGTTCGCCGGCGGCGATGGTTACAGGGTGGAAGAAAACGATGGGTGTCTTATGTTG
GGGTGGCATACACGGCCACTTATAGCTACCTCCGCCTGGAAGCTATTGCCGGACTCCGGC
ACCGGCGCCGGAGAAGTCGAGTTGTAA

Peptide Sequence

PEP ID

Solyc11g011260.1.1
PEP Infomation

GAI
Sequence

MKRDRDRDREREKRAFSNGAVSSGKSKIWEEDEEEKPDAGMDELLAVLGYKVKSSDMADV
AQKLEQLEMAMGTTMEDGITHLSTDTVHKNPSDMAGWVQSMLSSISTNFDMCNQENDVLV
SGCGSSSSIIDFSQNHRTSTISDDDLRAIPGGAVFNSDSNKRHRSTTSSFSTTSSSMVTD
SSATRPVVLVDSQETGVRLVHTLMACAEAVQQENLTLADQLVRHIGILAVSQSGAMRKVA
TYFAEALARRIYKIYPQDSMESSYTDVLQMHFYETCPYLKFAHFTANQAILEAFTGCNKV
HVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETI
GVEFEFRGFVANSLADLDATILDIRPSETEAVAINSVFELHRLLSRPGAIEKVLNSIKQI
NPKIVTLVEQEANHNAGVFIDRFNEALHYYSTMFDSLESSGSSSSASPTGILPQPPVNNQ
DLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLL
ALFAGGDGYRVEENDGCLMLGWHTRPLIATSAWKLLPDSGTGAGEVEL*

Transcript Sequence

Transcript ID

Solyc11g011260.1.1
Transcript Infomation

GAI
Sequence

ATGAAGAGAGATCGAGATCGAGATCGAGAAAGAGAGAAAAGAGCATTCTCTAATGGTGCT
GTTTCTTCAGGGAAAAGTAAGATTTGGGAAGAAGATGAAGAAGAAAAACCAGATGCTGGA
ATGGATGAGCTTTTAGCTGTTTTGGGTTATAAAGTGAAGTCGTCTGATATGGCGGATGTT
GCTCAAAAACTTGAACAGCTTGAGATGGCTATGGGTACAACGATGGAAGATGGTATTACT
CATCTTTCTACTGATACCGTTCATAAAAACCCATCTGATATGGCTGGTTGGGTACAAAGT
ATGTTATCTTCGATTTCGACAAACTTTGATATGTGTAATCAGGAAAACGATGTGCTTGTA
TCTGGTTGTGGTTCTTCTTCTTCTATAATCGATTTCTCACAAAATCATCGAACAAGTACC
ATTTCTGATGATGATTTAAGAGCTATACCTGGTGGTGCTGTTTTCAATTCGGATAGTAAT
AAAAGACACAGATCAACAACTTCTAGTTTTTCAACTACATCCTCATCTATGGTGACAGAT
TCATCAGCAACGAGACCTGTTGTACTAGTTGATTCACAAGAAACTGGGGTTCGTCTTGTT
CATACTTTAATGGCGTGTGCTGAAGCTGTACAACAAGAAAATTTAACTTTAGCGGATCAA
CTTGTTAGACATATTGGTATTCTTGCGGTTTCACAATCTGGTGCTATGAGAAAAGTTGCT
ACTTACTTTGCTGAAGCATTAGCAAGAAGAATCTACAAAATTTATCCACAAGATTCAATG
GAATCATCATATACAGATGTTTTACAAATGCATTTCTATGAAACTTGCCCTTATCTCAAA
TTCGCTCATTTTACTGCTAATCAAGCCATTCTTGAAGCGTTTACAGGTTGTAACAAAGTT
CATGTAATTGATTTCAGCTTAAAACAGGGTATGCAATGGCCTGCACTTATGCAAGCTTTA
GCTTTACGCCCCGGTGGACCTCCGGCATTTAGACTCACCGGAATCGGACCTCCACAGCCG
GATAACACAGATGCCTTGCAACAAGTTGGATGGAAGTTAGCTCAGTTAGCGGAAACTATT
GGGGTTGAATTTGAATTCAGGGGATTTGTTGCTAATTCATTAGCAGATCTTGATGCGACT
ATACTTGATATAAGGCCAAGTGAAACTGAAGCAGTAGCTATAAACTCTGTTTTTGAGCTT
CATCGATTGTTATCCCGGCCGGGAGCAATTGAAAAAGTGTTGAACTCTATTAAACAGATT
AACCCGAAGATTGTTACTCTTGTTGAGCAAGAAGCGAATCATAACGCAGGGGTTTTTATT
GATAGATTTAACGAAGCTTTGCATTATTACTCAACCATGTTTGATTCGTTAGAAAGCTCT
GGGTCTTCGTCTTCAGCTTCACCAACTGGGATTCTTCCTCAACCTCCGGTGAACAATCAA
GATTTGGTGATGTCGGAGGTTTATTTAGGGAGACAGATTTGTAACGTGGTGGCTTGTGAA
GGTTCAGATCGAGTTGAACGACATGAAACACTGAATCAATGGAGGGTTAGGATGAACTCA
TCTGGGTTCGATCCGGTTCATCTGGGTTCAAATGCGTTCAAACAAGCTTCCATGCTTTTA
GCTCTGTTCGCCGGCGGCGATGGTTACAGGGTGGAAGAAAACGATGGGTGTCTTATGTTG
GGGTGGCATACACGGCCACTTATAGCTACCTCCGCCTGGAAGCTATTGCCGGACTCCGGC
ACCGGCGCCGGAGAAGTCGAGTTGTAA