Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g011220.2.1
CDS Infomation

Transmembrane protein (AHRD V3.3 *** A0A0B0N9X1_GOSAR)
Sequence

ATGGAGGAGTATGAAGCTTTTCTGATTGAACCTGAACAGGAATGGCAAACGGTGTCGTAT
CATAAGAAGAACAAAAAACAGTCAGGTAAGTCGAAGCAGGGAGAGGAGTTCTCCGGCAAC
TGGAACAACGGGGAGAGCTCAGGTGATGTTTTCCGATCGATCGAACAACATGCGGAGGAG
AGAAGGAAGCGTATAGTTGAGTCTCAGAAGCTTTATGAAGCTGCTTCCGGTGAAAGTTCT
GCCGTCATTGATAAAAACGAGCAGGATAGCGATGGAGAAGATGCCGCTGGTGGTGCAATT
GAGAATGACGGTGTTGTGGAGAAGAAGAGTAAGCCGAAGAAGGTGAAGAAACCTAAGGTT
ACTGTTGCTGAAGCTGCTGCGAAGATCGATAATTCTGATCTAGTTGTTTATCTCGTTGAT
ATATCAACCTCGTTTGATAAGCAGGAAGATATACAGCTAATGCGATTTGCAGATTACTTT
GGACGAGCATTCGCCAAAGTGAGTTCATCTCAGTTCCCATGGATGAAGATTCTTAGGGAA
TCTTCAGTTGAGAAGATGATTGATATCCCTGTTTCTCAAATTTCTGAGGATGTTTATAAG
ACATCTGTTGACTGGCTTAACCAGCGATCATTTGATGCACTTGGTTCCTTTGTGTTATGG
TCATTGGATAGCATTATTGCTGATCTTGTACAGCACGAAGGAGCTTCAAAGGGATCCAAA
AAGGTGGTTCAGCAAGTATCTTCAAAATCCCAGGTTGCCATGTTTGTGGTTCTAGCAATG
GTATTGAGACGGAAACCTGATGTTTTAATCAGTCTCTTACCAATACTGAATGAAAATGGG
AAATACCGAGGACAAGATAAGCTTCCAGTCATGATTTGGGCAGTCACTCAGGCTTGCCAA
GCTGATTTAATCGTGGGATTGTTCATGTGGGTACATTTTCTCTTACCATTGTTAAGCAGT
AAATTGAACAGTAACCCACAGTCGAGAGACTTAATGTTACAGTTGGCTGAGAGAATTGTA
TCCTCACCAAAAGCCCGTGCTATACTCATAAATGGTGCAGTCAGAAAGGGAGAACGTGTT
GTGCCTCCATCAGCTCTTGAGGTTTTGATGAGGATCACCTTCCCAGCACCTTCTGCTCGA
ATTAAGGCCACTGACAGGTTTGAAGCGGTCTATCCTACACTGAAAGAGGTAGCTCTTGTT
GCTGCCCCTGGGAGCAAAGCAATGAAGCAGCTAACCCAGCGGATACTGCCTTTTGCTATC
AAAGCTGTAGGGGAAGGTGTTCCTGATCTATCAAAGGAAGCTACTGAGCTATCTATTTGG
TGTTTGACTCAGAACCCCGACTGTTACAAGCTGTGGGACAATATTTATCTGGACAATGTA
GAAGCAAGTCTAATAATAATTAAGAAGCTGTCCACAGAGTTCAAGGCGCATTCTGCTAAG
GGACCTGAACTTGATCCATTGAAGGTGACCTTGAACAGTCTCAGACTTAAGAGCGAGAAG
GCATTGGTCAGTGGGGATAATGCTGCTCATCAAGCGTCCTTGAAGGAAGTGCAGAAGTAC
TGCAAGATTTTACTTGGACGTTTATCCCATGGTAATGGATGCATGAAGGCTTTCTTTGTT
ATCGGTCTAACAATGGCTGTGGGTGTTGCTTTTGTCTCCAAGGAGTCCCCGGAGGTCAAG
AAACTGTTGGCAGATCGCTTCAATGACTTGCAGTCCCTGGACTTCAAGAAACTGTTGACA
GATCTCTCCAACGACGTGCAGTCCCTGGATTTCAAGAAACTGTTGTCAGATTTCAACTTG
GCTTGA

Peptide Sequence

PEP ID

Solyc11g011220.2.1
PEP Infomation

Transmembrane protein (AHRD V3.3 *** A0A0B0N9X1_GOSAR)
Sequence

MEEYEAFLIEPEQEWQTVSYHKKNKKQSGKSKQGEEFSGNWNNGESSGDVFRSIEQHAEE
RRKRIVESQKLYEAASGESSAVIDKNEQDSDGEDAAGGAIENDGVVEKKSKPKKVKKPKV
TVAEAAAKIDNSDLVVYLVDISTSFDKQEDIQLMRFADYFGRAFAKVSSSQFPWMKILRE
SSVEKMIDIPVSQISEDVYKTSVDWLNQRSFDALGSFVLWSLDSIIADLVQHEGASKGSK
KVVQQVSSKSQVAMFVVLAMVLRRKPDVLISLLPILNENGKYRGQDKLPVMIWAVTQACQ
ADLIVGLFMWVHFLLPLLSSKLNSNPQSRDLMLQLAERIVSSPKARAILINGAVRKGERV
VPPSALEVLMRITFPAPSARIKATDRFEAVYPTLKEVALVAAPGSKAMKQLTQRILPFAI
KAVGEGVPDLSKEATELSIWCLTQNPDCYKLWDNIYLDNVEASLIIIKKLSTEFKAHSAK
GPELDPLKVTLNSLRLKSEKALVSGDNAAHQASLKEVQKYCKILLGRLSHGNGCMKAFFV
IGLTMAVGVAFVSKESPEVKKLLADRFNDLQSLDFKKLLTDLSNDVQSLDFKKLLSDFNL
A*

Transcript Sequence

Transcript ID

Solyc11g011220.2.1
Transcript Infomation

Transmembrane protein (AHRD V3.3 *** A0A0B0N9X1_GOSAR)
Sequence

TTTTCTTCTCACTGCCTCTTCTTGTCCACTTCTTAACCCGACCCGATTCAACACCCCCTA
TATAAACACCTCCGACGACGATCACTCTCCCCGTGATCTTTCTCCGACCGGCGAAAATTC
CGACGTCCTTTTTTGCCGTTTTCCTTTTAGAATTATAAAAGAGGAAAACGGAAAATTGAT
TTTCTGTTTTCCGTTTAATTTTCCGATTTTCATTCGTTTTGTGCATTTTTCACCATGGAG
GAGTATGAAGCTTTTCTGATTGAACCTGAACAGGAATGGCAAACGGTGTCGTATCATAAG
AAGAACAAAAAACAGTCAGGTAAGTCGAAGCAGGGAGAGGAGTTCTCCGGCAACTGGAAC
AACGGGGAGAGCTCAGGTGATGTTTTCCGATCGATCGAACAACATGCGGAGGAGAGAAGG
AAGCGTATAGTTGAGTCTCAGAAGCTTTATGAAGCTGCTTCCGGTGAAAGTTCTGCCGTC
ATTGATAAAAACGAGCAGGATAGCGATGGAGAAGATGCCGCTGGTGGTGCAATTGAGAAT
GACGGTGTTGTGGAGAAGAAGAGTAAGCCGAAGAAGGTGAAGAAACCTAAGGTTACTGTT
GCTGAAGCTGCTGCGAAGATCGATAATTCTGATCTAGTTGTTTATCTCGTTGATATATCA
ACCTCGTTTGATAAGCAGGAAGATATACAGCTAATGCGATTTGCAGATTACTTTGGACGA
GCATTCGCCAAAGTGAGTTCATCTCAGTTCCCATGGATGAAGATTCTTAGGGAATCTTCA
GTTGAGAAGATGATTGATATCCCTGTTTCTCAAATTTCTGAGGATGTTTATAAGACATCT
GTTGACTGGCTTAACCAGCGATCATTTGATGCACTTGGTTCCTTTGTGTTATGGTCATTG
GATAGCATTATTGCTGATCTTGTACAGCACGAAGGAGCTTCAAAGGGATCCAAAAAGGTG
GTTCAGCAAGTATCTTCAAAATCCCAGGTTGCCATGTTTGTGGTTCTAGCAATGGTATTG
AGACGGAAACCTGATGTTTTAATCAGTCTCTTACCAATACTGAATGAAAATGGGAAATAC
CGAGGACAAGATAAGCTTCCAGTCATGATTTGGGCAGTCACTCAGGCTTGCCAAGCTGAT
TTAATCGTGGGATTGTTCATGTGGGTACATTTTCTCTTACCATTGTTAAGCAGTAAATTG
AACAGTAACCCACAGTCGAGAGACTTAATGTTACAGTTGGCTGAGAGAATTGTATCCTCA
CCAAAAGCCCGTGCTATACTCATAAATGGTGCAGTCAGAAAGGGAGAACGTGTTGTGCCT
CCATCAGCTCTTGAGGTTTTGATGAGGATCACCTTCCCAGCACCTTCTGCTCGAATTAAG
GCCACTGACAGGTTTGAAGCGGTCTATCCTACACTGAAAGAGGTAGCTCTTGTTGCTGCC
CCTGGGAGCAAAGCAATGAAGCAGCTAACCCAGCGGATACTGCCTTTTGCTATCAAAGCT
GTAGGGGAAGGTGTTCCTGATCTATCAAAGGAAGCTACTGAGCTATCTATTTGGTGTTTG
ACTCAGAACCCCGACTGTTACAAGCTGTGGGACAATATTTATCTGGACAATGTAGAAGCA
AGTCTAATAATAATTAAGAAGCTGTCCACAGAGTTCAAGGCGCATTCTGCTAAGGGACCT
GAACTTGATCCATTGAAGGTGACCTTGAACAGTCTCAGACTTAAGAGCGAGAAGGCATTG
GTCAGTGGGGATAATGCTGCTCATCAAGCGTCCTTGAAGGAAGTGCAGAAGTACTGCAAG
ATTTTACTTGGACGTTTATCCCATGGTAATGGATGCATGAAGGCTTTCTTTGTTATCGGT
CTAACAATGGCTGTGGGTGTTGCTTTTGTCTCCAAGGAGTCCCCGGAGGTCAAGAAACTG
TTGGCAGATCGCTTCAATGACTTGCAGTCCCTGGACTTCAAGAAACTGTTGACAGATCTC
TCCAACGACGTGCAGTCCCTGGATTTCAAGAAACTGTTGTCAGATTTCAACTTGGCTTGA
AACTTCCCCTTCTCACATAGAGGGTTGTAAGTTAAATCACACCTACCTTTGTTATATGTT
TAAATTATGTCCCGGCACAGAGAAGCTAGCACACCCCAGAACAAAAATGGGTAGAGAATG
AGTTGTTTTAGAAAGGAAAAAAAAATAAAATAGGTACAGCAGATATGATGCCAAGTTTCT
GGCCTCAGTTTACAGTGTTTGTGTTTGTTTAGTTTTTTTATGAAACAGAACTATAACTAT
GTTTGGTTTTTCAAGCCATTTTCATTTGATAAGAAATGGTTTGTAACTTTATATATGTAG
TATATGGAAGGAATTGTAAGATATGATTATGGTTGGAATAGCTTTCCCTTGACTCTGGCC
TCTATTCTCTAGTCTATAT