Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g011170.2.1
CDS Infomation

Senescence-associated protein (AHRD V3.3 *** Q9AXU3_IPOBA)
Sequence

ATGGCTACCCCAAATGGGATCATTTATTATTCTGCTAAATCACCTCAACACCCAAAGGTT
CACACCCACAGTCAAGGGACTGAACATAGCAAACACAACGGATATTCTAATATGCCAAGA
CTGAAGTTTTCTAATAAGAGGTTCTGGGAGGCATGCGGAAAACTAAGCAACCGTGTCATC
TTCAGGGGATCTCCTGTGTTATGTCTCTCAACAGAAACACGCGACACTGAGACAGAGTGT
GCCAGAAACAGTGATGATTGTTCCAATATATCTAGTGTACAAGAAAATGATCAAGCAACC
ACAGTTGGGAAAGTTATTCCTTCAAGTCAGGCAATTGCAGAAGCTTGTAAATTTGCTTAC
AACGATGCCAAATTTGTGAATGAAAGGGCGAAGAATGATATTGTGCTGCTTTCTCGGGAA
ATAATGAGAATGGATGCCCGTGCGCGCCAAGATGTTGCATTTCTTGGTTCAGAGTTTCTT
AAGCTTGATGCTCGGGCACGGGAAGATACTGAGAAAGTTGATCACAATGTAAAGAAAAGA
GCCGAAAGAATCCAGCATGTTGCCACTATTCTTAAAAACATAGCTCAAACGAGACTGAAG
AAAGCTGCTGATCGACACTGGAGCGATGGTGCCTTGGAGGCTGATTTAAGACGTGCCGAT
TTTGTGGCAAAACAGCGTGCAATGGAGGATTCTCTGATGGCTCTGGAGTTTGTCAAGAAC
ATTCATGATAGGATGGTGAGCAAGATGTGCAAATTGAAAAGAAGTTCCATCGATACGGAG
AAAACAAGGCATATTACTCTAGAGAAGAATGGGAAAACTCTGGAGTTTCTTCCTGGGGAA
GTTTCAGCTGATCGCCTCACTGCTATCCAGGAAGCATATTGGGATATAGCATCTGCACTT
TCCGAAGCTGATGGAATTGACTATACTGATCCAGAAGAGCTCGAGTTGTTGGTAGCAACG
CTTATAGATCTTGATGCAATGGATGGTAAAAGTAGTGTATCCTTGCTGGCCGAGTGTTCA
AGTTCTCCTGATGTGAACACAAGGAAAGCATTAGCAAATGCACTTGCAGCTGCACCGTCC
ATGTGGACTTTAGGAAACGCTGGCATGGGAGCGTTACAGAGACTAGCAGAAGATGACAAC
CCTGCCATTGCAGCTGCTGCATCTAAAACCATTCTTGAATTGAAAAGACAATGGGAAATA
GGAGAGGGAGATAGCTGGAGGTTCATGGTGGACGAAGTGTCACCAGGGGATGTAGGGAGT
CAAGATGACAACAATGGGACATATTAG

Peptide Sequence

PEP ID

Solyc11g011170.2.1
PEP Infomation

Senescence-associated protein (AHRD V3.3 *** Q9AXU3_IPOBA)
Sequence

MATPNGIIYYSAKSPQHPKVHTHSQGTEHSKHNGYSNMPRLKFSNKRFWEACGKLSNRVI
FRGSPVLCLSTETRDTETECARNSDDCSNISSVQENDQATTVGKVIPSSQAIAEACKFAY
NDAKFVNERAKNDIVLLSREIMRMDARARQDVAFLGSEFLKLDARAREDTEKVDHNVKKR
AERIQHVATILKNIAQTRLKKAADRHWSDGALEADLRRADFVAKQRAMEDSLMALEFVKN
IHDRMVSKMCKLKRSSIDTEKTRHITLEKNGKTLEFLPGEVSADRLTAIQEAYWDIASAL
SEADGIDYTDPEELELLVATLIDLDAMDGKSSVSLLAECSSSPDVNTRKALANALAAAPS
MWTLGNAGMGALQRLAEDDNPAIAAAASKTILELKRQWEIGEGDSWRFMVDEVSPGDVGS
QDDNNGTY*

Transcript Sequence

Transcript ID

Solyc11g011170.2.1
Transcript Infomation

Senescence-associated protein (AHRD V3.3 *** Q9AXU3_IPOBA)
Sequence

TAGGTTATTTTTTTTATCTCTCGAGACCTCAATTCTTTCAGCAGTAACTATAAGTTAAGA
TGAAATACATACTACTACTACTATTTACCTATAACTAAAGGACAAAATCTATATACAAGA
CAGTTATCTAGAACTTCACAAACAAATCCTCCAATTTCAAATGAGTGTTTCTCTTATTCC
AACTACCATACCCCAGTAGTTAATTTTCTTTTGTAAGGTAGTGTTGGACAATAAGGGGCC
ATATGCTATGCTTGTGGCCACAAATTCTCCAATTTTGCAATGCTTACTTACTCTTTTCTT
CACCATTCCCTATATCCAATTTCAGTAAGGACCCCTCTTTCCCTTTAGCCAAATATACTT
CCAGCAACCCCACCCCCTCTCTCTCTCTCTCTCTACTCTGTAGCAAAGGTAAAGTCTTTT
TCTTTAGTGTGCTATTTACTTGATTCCTTCATCTCTTTCTTGTTGCTAGATGAAATTATG
TAGTTGCTTTGCTTTATTTAGCTTATTTTTCCATGTGGGTGTCCATCAATTCTTCCAAGA
TTTCATCTTTACTAACCCCACCCCACCCCCTTCTCTCTGTGCTGGGTAGCAAAGGTTTTC
GGTTAATGCTTTGTTAAATACTTTTTCGTCTCTCCGGAAACAGCTGGGAATTTTGCTTTT
GGCTTGTACGATCTTGTAGATAACCATGGCTACCCCAAATGGGATCATTTATTATTCTGC
TAAATCACCTCAACACCCAAAGGTTCACACCCACAGTCAAGGGACTGAACATAGCAAACA
CAACGGATATTCTAATATGCCAAGACTGAAGTTTTCTAATAAGAGGTTCTGGGAGGCATG
CGGAAAACTAAGCAACCGTGTCATCTTCAGGGGATCTCCTGTGTTATGTCTCTCAACAGA
AACACGCGACACTGAGACAGAGTGTGCCAGAAACAGTGATGATTGTTCCAATATATCTAG
TGTACAAGAAAATGATCAAGCAACCACAGTTGGGAAAGTTATTCCTTCAAGTCAGGCAAT
TGCAGAAGCTTGTAAATTTGCTTACAACGATGCCAAATTTGTGAATGAAAGGGCGAAGAA
TGATATTGTGCTGCTTTCTCGGGAAATAATGAGAATGGATGCCCGTGCGCGCCAAGATGT
TGCATTTCTTGGTTCAGAGTTTCTTAAGCTTGATGCTCGGGCACGGGAAGATACTGAGAA
AGTTGATCACAATGTAAAGAAAAGAGCCGAAAGAATCCAGCATGTTGCCACTATTCTTAA
AAACATAGCTCAAACGAGACTGAAGAAAGCTGCTGATCGACACTGGAGCGATGGTGCCTT
GGAGGCTGATTTAAGACGTGCCGATTTTGTGGCAAAACAGCGTGCAATGGAGGATTCTCT
GATGGCTCTGGAGTTTGTCAAGAACATTCATGATAGGATGGTGAGCAAGATGTGCAAATT
GAAAAGAAGTTCCATCGATACGGAGAAAACAAGGCATATTACTCTAGAGAAGAATGGGAA
AACTCTGGAGTTTCTTCCTGGGGAAGTTTCAGCTGATCGCCTCACTGCTATCCAGGAAGC
ATATTGGGATATAGCATCTGCACTTTCCGAAGCTGATGGAATTGACTATACTGATCCAGA
AGAGCTCGAGTTGTTGGTAGCAACGCTTATAGATCTTGATGCAATGGATGGTAAAAGTAG
TGTATCCTTGCTGGCCGAGTGTTCAAGTTCTCCTGATGTGAACACAAGGAAAGCATTAGC
AAATGCACTTGCAGCTGCACCGTCCATGTGGACTTTAGGAAACGCTGGCATGGGAGCGTT
ACAGAGACTAGCAGAAGATGACAACCCTGCCATTGCAGCTGCTGCATCTAAAACCATTCT
TGAATTGAAAAGACAATGGGAAATAGGAGAGGGAGATAGCTGGAGGTTCATGGTGGACGA
AGTGTCACCAGGGGATGTAGGGAGTCAAGATGACAACAATGGGACATATTAG