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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g010510.2.1
CDS Infomation

IMPACT family member in pol 5'region (AHRD V3.3 *** A0A0B0MZ52_GOSAR)
Sequence

ATGTCTGCTTCTTGGTTAATTTCCAGTCCTTGTTCAAAGCTGAACCACCATCTCCGCTGC
CGTAACCACCGCCTGATTCTCTCGCCGGCGTTCTTATTTTCCGGCACCGGGAAACAAATG
GTCACCGCTAGCAGCAGCGCCAGTAGTAGTTCAAATAGAGGTGCATTTACAACACTCAAA
GAAAGAGTAACTTTTGAGAAAGAAATCAAAAAAAGCAAATTTATTGCCATTTCTGGTCAT
ATTCCAGATGAGGGCTCTGCTCAATCTTTCCTTTCTGAGGTACGAGATCCTCGGGCTACA
CATAATTGTTGGGCGTACAAGGTTGGTGAACAATATCGGACTAATGATGATGGCGAACCA
TCTGGTACTGCTGGCAAGCCGATACATTCTGCAATTGCATCCTCAGGATTGGATAGAATC
ATGGTGGTCGTTATTAGACACTTTGGAGGAATTAAACTTGGCACTGGAGGTCTAGTAAGA
GCTTATGGAGGAGTCGCTGCAGAATGTTTAAGAAATGCTCCTACATGTCTTGTAAAATCT
AAAGTGCCGATGGGCTTGGAGGTTCCTTTTGAACTACTAGGAGTCCTATACCATCAGCTA
CAGTCATTCCAAGCAGAAGATATCAAGCAGGATTATGATACCGGGAAAGATGGAGTCACC
ATGGTGACGTTCAAAGCTGATTTTGACCGTGTACAAGGTTTAGAAGAAGCTATTAAGGCC
AACTGCAGCCGTGATATTGTATTCTACAAACGCTAG

Peptide Sequence

PEP ID

Solyc11g010510.2.1
PEP Infomation

IMPACT family member in pol 5'region (AHRD V3.3 *** A0A0B0MZ52_GOSAR)
Sequence

MSASWLISSPCSKLNHHLRCRNHRLILSPAFLFSGTGKQMVTASSSASSSSNRGAFTTLK
ERVTFEKEIKKSKFIAISGHIPDEGSAQSFLSEVRDPRATHNCWAYKVGEQYRTNDDGEP
SGTAGKPIHSAIASSGLDRIMVVVIRHFGGIKLGTGGLVRAYGGVAAECLRNAPTCLVKS
KVPMGLEVPFELLGVLYHQLQSFQAEDIKQDYDTGKDGVTMVTFKADFDRVQGLEEAIKA
NCSRDIVFYKR*

Transcript Sequence

Transcript ID

Solyc11g010510.2.1
Transcript Infomation

IMPACT family member in pol 5'region (AHRD V3.3 *** A0A0B0MZ52_GOSAR)
Sequence

ATCTTCACGAAATTGCTGCCACCATAGATGTCTGCTTCTTGGTTAATTTCCAGTCCTTGT
TCAAAGCTGAACCACCATCTCCGCTGCCGTAACCACCGCCTGATTCTCTCGCCGGCGTTC
TTATTTTCCGGCACCGGGAAACAAATGGTCACCGCTAGCAGCAGCGCCAGTAGTAGTTCA
AATAGAGGTGCATTTACAACACTCAAAGAAAGAGTAACTTTTGAGAAAGAAATCAAAAAA
AGCAAATTTATTGCCATTTCTGGTCATATTCCAGATGAGGGCTCTGCTCAATCTTTCCTT
TCTGAGGTACGAGATCCTCGGGCTACACATAATTGTTGGGCGTACAAGGTTGGTGAACAA
TATCGGACTAATGATGATGGCGAACCATCTGGTACTGCTGGCAAGCCGATACATTCTGCA
ATTGCATCCTCAGGATTGGATAGAATCATGGTGGTCGTTATTAGACACTTTGGAGGAATT
AAACTTGGCACTGGAGGTCTAGTAAGAGCTTATGGAGGAGTCGCTGCAGAATGTTTAAGA
AATGCTCCTACATGTCTTGTAAAATCTAAAGTGCCGATGGGCTTGGAGGTTCCTTTTGAA
CTACTAGGAGTCCTATACCATCAGCTACAGTCATTCCAAGCAGAAGATATCAAGCAGGAT
TATGATACCGGGAAAGATGGAGTCACCATGGTGACGTTCAAAGCTGATTTTGACCGTGTA
CAAGGTTTAGAAGAAGCTATTAAGGCCAACTGCAGCCGTGATATTGTATTCTACAAACGC
TAGAATTTTTCCGTGTCACTTTGTCTGATGGTTTCAAGTCCCATCCTGCTGGAACTTATG
GAGATTTGAAATACCTTTTGCTCCAGAAAGCTACATCTCGAGATGGTTAGTATCATTCGC
TCATTCTTGAAAGGTTCGTAGCATTGCTCTTGTTGACACCAATGTCTGAGCTGACTTTTT
CGTCTCTTTTAGTCTTTGTTCTGTAATTTAGGAGTCGTTATAGGAGACGCAAGCATGAGA
TTGGTCTGTCCTCATTTGCTCTTATATCCATACAACTTTTAAAGATATATACTTGTACAA
TCTTCCCCATACTTCTTGTTTCTGGATTCATGAATAAGACATGGATGCTCTGTTTGTTTC
GTTAGTATCTGTTGTTTCTTGTACTTTCGTTACTTTCTTTTTCTGTACTAAGCTTTGGAT
TGTTTTACCTGCTAAAGAAATTGAATGCTTGTAAATGGCATTTTCTTGGTTTTGCCAA