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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g010410.2.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

ATGGAAATTTTGATTTCAAATTGGTCAAATGTTGAATTTGTACCTAAAAAGTATATTTTC
CCACTAGATAGAAGACCAGGAAAAATTAAATTTCCTGTTTGCCATGATATACCACTCATA
GATTTGGCTAATAATCATCCAAATGATGCAATTCAACAAGTTATTAAAGCATGTCAAGAA
TTTGGAATATTTCAGGTGATAAATCATGGAGTATGTGAAAATCTAATGGATGATACAATG
AATATATACAAGGAATTCTTCAAATTGCCTAGTGAATACAAGGCAAAATTTTACTCAAAT
GATATAAACAAAAGCTGCAGGTTATGTTCAAGTACATTAGCATATGATACTGAAGAATTT
CACTATTGGAGAGATAATTTTACTCATCATTGCTATCCTTTAGAGGAATACATTATGACT
TGGCCCAATAAGCCCACCAAGTATAGAGAAGTGGTAAGTGAGTATTCAATAGAAACAAGG
AAGCTACTATACAAGATTTTGGATATGATATGCAAAGGATTAGGACTAGAGAAAGGTTAT
TTTGAAGGTGAATTAAGTAAAACAAATGTGATATCTGTGAATCATCATATTCCATGTCCA
AATCCAAGTTTAACACTAGGAATGCCAGTACATTCTGATCCAAATCTCATAACATTGCTT
CAACAATGTAATGTTCCTGGACTTCAAATACTTAAAGATGGCAAATGGATTGGTGTTCAA
CCTATTCCTCATGCTATAGTTGTTATTCCTGGTCTACAATTGAAGGTAATAAGCAATGAC
AGGTTCATAACTCGAGTTCATCGTGTGGTGACACACGCAAAAGAGGCTCGAACCACAATT
GGTGTATTTCTCGGTCCGTCACCCAAGTCTTTAATAAAACCAGCCATTGATTTGGTTTAC
ACTAAATCGGAGTTTAGAACCTTTACTTATCCAGAGTTCCTCGAAGCATTTACTGCTGGG
GCTAAATGTGATGCCGAATTTGCCCTCAACCATTTTAGAAACAAAACTTAG

Peptide Sequence

PEP ID

Solyc11g010410.2.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

MEILISNWSNVEFVPKKYIFPLDRRPGKIKFPVCHDIPLIDLANNHPNDAIQQVIKACQE
FGIFQVINHGVCENLMDDTMNIYKEFFKLPSEYKAKFYSNDINKSCRLCSSTLAYDTEEF
HYWRDNFTHHCYPLEEYIMTWPNKPTKYREVVSEYSIETRKLLYKILDMICKGLGLEKGY
FEGELSKTNVISVNHHIPCPNPSLTLGMPVHSDPNLITLLQQCNVPGLQILKDGKWIGVQ
PIPHAIVVIPGLQLKVISNDRFITRVHRVVTHAKEARTTIGVFLGPSPKSLIKPAIDLVY
TKSEFRTFTYPEFLEAFTAGAKCDAEFALNHFRNKT*

Transcript Sequence

Transcript ID

Solyc11g010410.2.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

ATGGAAATTTTGATTTCAAATTGGTCAAATGTTGAATTTGTACCTAAAAAGTATATTTTC
CCACTAGATAGAAGACCAGGAAAAATTAAATTTCCTGTTTGCCATGATATACCACTCATA
GATTTGGCTAATAATCATCCAAATGATGCAATTCAACAAGTTATTAAAGCATGTCAAGAA
TTTGGAATATTTCAGGTGATAAATCATGGAGTATGTGAAAATCTAATGGATGATACAATG
AATATATACAAGGAATTCTTCAAATTGCCTAGTGAATACAAGGCAAAATTTTACTCAAAT
GATATAAACAAAAGCTGCAGGTTATGTTCAAGTACATTAGCATATGATACTGAAGAATTT
CACTATTGGAGAGATAATTTTACTCATCATTGCTATCCTTTAGAGGAATACATTATGACT
TGGCCCAATAAGCCCACCAAGTATAGAGAAGTGGTAAGTGAGTATTCAATAGAAACAAGG
AAGCTACTATACAAGATTTTGGATATGATATGCAAAGGATTAGGACTAGAGAAAGGTTAT
TTTGAAGGTGAATTAAGTAAAACAAATGTGATATCTGTGAATCATCATATTCCATGTCCA
AATCCAAGTTTAACACTAGGAATGCCAGTACATTCTGATCCAAATCTCATAACATTGCTT
CAACAATGTAATGTTCCTGGACTTCAAATACTTAAAGATGGCAAATGGATTGGTGTTCAA
CCTATTCCTCATGCTATAGTTGTTATTCCTGGTCTACAATTGAAGGTAATAAGCAATGAC
AGGTTCATAACTCGAGTTCATCGTGTGGTGACACACGCAAAAGAGGCTCGAACCACAATT
GGTGTATTTCTCGGTCCGTCACCCAAGTCTTTAATAAAACCAGCCATTGATTTGGTTTAC
ACTAAATCGGAGTTTAGAACCTTTACTTATCCAGAGTTCCTCGAAGCATTTACTGCTGGG
GCTAAATGTGATGCCGAATTTGCCCTCAACCATTTTAGAAACAAAACTTAGCTTTTAGTT
ATCTTAATGGAAAATTGTTGTAAAAAAATAATATGGTGGGTGGTACTATATCTATGGTCA
CATAATTAGAAAAATTGTCCCAAAAAAAATTTATGTATAGTTTTTTTTTTA