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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g010400.2.1
CDS Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

ATGGATATCTTGATTTCAAATTGGTCAAATGTTGAATTTGTGCCTAAAACATATATTTTT
CCACCAGAAAGTAGACCAGGAAAGCTTGAATTTCCTATTTGTAATGATATACCACTCATA
GATTTGGCTCATAATAATTCAGATGAAACAATTCAACAAGTAATTAGAGCATGCCAAGAA
TTTGGATTCTTTCAGGTGATAAACCATGGAATAAGTGAAAATCTAATGGATGATACAATG
AATATATACAATGAATTGTTCAAATTGCCTAGTGAATACAAGGCAAAATTTTACTCAAAT
GACACAAACAAAAGCTGCAAAATATTTTCAAGTACATTAGCATATGATACTGAGGAAGTT
CACTATTGGAGAGATACATTTACTCATCGTTGTAATCCTTTAGAGGAACATATCCCTTCT
TGGCCTGATAAGCCCACCAACTACAGAGAAGTGGTAAGTGAATATTCAATAGAAACAAGG
AAGCTATTGAACAAGATTTTGGATATGATATGCAAAGGATTAGGACTAAACTTAGGTTAT
TTTGAAGGTGAATTAAGTAAAGCACATTTGATATCTGTTAATCATCATATTCCATGTCCA
AATCCAAGTTTAACACTAGGAATGCCAGCACATTCTGATCCAAATCTCATAACAATGCTT
CAACAAGGTGAAGTTCCTGGACTTCAAATACTTAAGGATGGAAAATGGATTGGTGTTAAA
CATATTCCTCATACTCTAATTATTATCCCTGGTCTACAATTGAAGGTAATAAGCAACGAC
AGGTTCATAACTCCGGTTCATCGGGTGGTCACACACCCAAAAGAGGCTCGAACCACAATT
GGTGTATTTCTCGTTCCGTCACCAGAGTTTTTAATAAAACCGGCTACTACTTTGATTCAA
ACTGTACCAGTGTTCAGAGACTTTACTTATCCAGAGTTCCTTGAAACATTTGTTGATAGA
AGACCAGGAAAAATTAAATTTCCTGTTTGCCATGATATACCACTCATAGATTTGGCTAAT
AATCATCCAAATGATGCAATTCAACAAGTTATTAAAGCATGTCAAGAATTTGGAATATTT
CAGGTGATAAATCATGGAGTATGTGAAAATCTAATGGATGATACAATGAATATATACAAG
GAATTCTTCAAATTGCCTAGTGAATACAAGGCAAAATTTTACTCAAATGATATAAACAAA
AGCTGCAGGTTATGTTCAAGTACATTAGCATATGATACTGAAGAATTTCACTATTGGAGA
GATAATTTTACTCATCATTGCTATCCTTTAGAGGAATACATTATGACTTGGCCCAATAAG
CCCACCAAGTATAGAGAAGTGGTAAGTGAGTATTCAATAGAAACAAGGAAGCTACTATAC
AAGATTTTGGATATGATATGCAAAGGATTAGGACTAGAGAAAGGTTATTTTGAAGGTGAA
TTAAGTAAAACAAATGTGATATCTGTGAATCATCATATTCCATGTCCAAATCCAAGTTTA
ACACTAGGAATGCCAGTACATTCTGATCCAAATCTCATAACATTGCTTCAACAATGTAAT
GTTCCTGGACTTCAAATACTTAAAGATGGCAAATGGATTGGTGTTCAACCTATTCCTCAT
GCTATAGTTGTTATTCCTGGTCTACAATTGAAGTTATCTTAA

Peptide Sequence

PEP ID

Solyc11g010400.2.1
PEP Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

MDILISNWSNVEFVPKTYIFPPESRPGKLEFPICNDIPLIDLAHNNSDETIQQVIRACQE
FGFFQVINHGISENLMDDTMNIYNELFKLPSEYKAKFYSNDTNKSCKIFSSTLAYDTEEV
HYWRDTFTHRCNPLEEHIPSWPDKPTNYREVVSEYSIETRKLLNKILDMICKGLGLNLGY
FEGELSKAHLISVNHHIPCPNPSLTLGMPAHSDPNLITMLQQGEVPGLQILKDGKWIGVK
HIPHTLIIIPGLQLKVISNDRFITPVHRVVTHPKEARTTIGVFLVPSPEFLIKPATTLIQ
TVPVFRDFTYPEFLETFVDRRPGKIKFPVCHDIPLIDLANNHPNDAIQQVIKACQEFGIF
QVINHGVCENLMDDTMNIYKEFFKLPSEYKAKFYSNDINKSCRLCSSTLAYDTEEFHYWR
DNFTHHCYPLEEYIMTWPNKPTKYREVVSEYSIETRKLLYKILDMICKGLGLEKGYFEGE
LSKTNVISVNHHIPCPNPSLTLGMPVHSDPNLITLLQQCNVPGLQILKDGKWIGVQPIPH
AIVVIPGLQLKLS*

Transcript Sequence

Transcript ID

Solyc11g010400.2.1
Transcript Infomation

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** AT5G24530.1)
Sequence

TATATAATAATAAGAACAGTAAAATAGTAGGGAGAAGAGAGAAAACTTCGATAATCCAAA
AGGTAATATTGGGCTGTTTGAAGTGGTTTTGGTGTTAGTTGGAAGTCCTAATAGAGAAGT
AGGGATAAGTGGTTTTTAATAAAGAAGGGCAATGAAGCCTCACATAGTTAAGGTAAAAAA
TTCGCCAAAAAAATAATATTTTCTTTATTCAATTTATTCGATACGGGATATAAATTAAAT
ATATATATTTAAGTATAATAGAATGGTTAAGATTCATTTATTCCTAATCAAAGGTTACAA
ATTTTAAGCTTAAATAAATGAAAATAAAAAATTGTTTGGAGTGCTGGCCCAAGAAAATAA
ACCCTTTAGTATGTGATTCAATTTATTTAATCGTTAATACAAATATCAAATAACGGGGTA
CGGATAATAATTTATTCCTTAGTGAAAACTCTTTTGTTTGTTATTTATACAAATCATCTA
TGTACAAATAGATTCAAACACACAACAAATTTATGGATATCTTGATTTCAAATTGGTCAA
ATGTTGAATTTGTGCCTAAAACATATATTTTTCCACCAGAAAGTAGACCAGGAAAGCTTG
AATTTCCTATTTGTAATGATATACCACTCATAGATTTGGCTCATAATAATTCAGATGAAA
CAATTCAACAAGTAATTAGAGCATGCCAAGAATTTGGATTCTTTCAGGTGATAAACCATG
GAATAAGTGAAAATCTAATGGATGATACAATGAATATATACAATGAATTGTTCAAATTGC
CTAGTGAATACAAGGCAAAATTTTACTCAAATGACACAAACAAAAGCTGCAAAATATTTT
CAAGTACATTAGCATATGATACTGAGGAAGTTCACTATTGGAGAGATACATTTACTCATC
GTTGTAATCCTTTAGAGGAACATATCCCTTCTTGGCCTGATAAGCCCACCAACTACAGAG
AAGTGGTAAGTGAATATTCAATAGAAACAAGGAAGCTATTGAACAAGATTTTGGATATGA
TATGCAAAGGATTAGGACTAAACTTAGGTTATTTTGAAGGTGAATTAAGTAAAGCACATT
TGATATCTGTTAATCATCATATTCCATGTCCAAATCCAAGTTTAACACTAGGAATGCCAG
CACATTCTGATCCAAATCTCATAACAATGCTTCAACAAGGTGAAGTTCCTGGACTTCAAA
TACTTAAGGATGGAAAATGGATTGGTGTTAAACATATTCCTCATACTCTAATTATTATCC
CTGGTCTACAATTGAAGGTAATAAGCAACGACAGGTTCATAACTCCGGTTCATCGGGTGG
TCACACACCCAAAAGAGGCTCGAACCACAATTGGTGTATTTCTCGTTCCGTCACCAGAGT
TTTTAATAAAACCGGCTACTACTTTGATTCAAACTGTACCAGTGTTCAGAGACTTTACTT
ATCCAGAGTTCCTTGAAACATTTGTTGATAGAAGACCAGGAAAAATTAAATTTCCTGTTT
GCCATGATATACCACTCATAGATTTGGCTAATAATCATCCAAATGATGCAATTCAACAAG
TTATTAAAGCATGTCAAGAATTTGGAATATTTCAGGTGATAAATCATGGAGTATGTGAAA
ATCTAATGGATGATACAATGAATATATACAAGGAATTCTTCAAATTGCCTAGTGAATACA
AGGCAAAATTTTACTCAAATGATATAAACAAAAGCTGCAGGTTATGTTCAAGTACATTAG
CATATGATACTGAAGAATTTCACTATTGGAGAGATAATTTTACTCATCATTGCTATCCTT
TAGAGGAATACATTATGACTTGGCCCAATAAGCCCACCAAGTATAGAGAAGTGGTAAGTG
AGTATTCAATAGAAACAAGGAAGCTACTATACAAGATTTTGGATATGATATGCAAAGGAT
TAGGACTAGAGAAAGGTTATTTTGAAGGTGAATTAAGTAAAACAAATGTGATATCTGTGA
ATCATCATATTCCATGTCCAAATCCAAGTTTAACACTAGGAATGCCAGTACATTCTGATC
CAAATCTCATAACATTGCTTCAACAATGTAATGTTCCTGGACTTCAAATACTTAAAGATG
GCAAATGGATTGGTGTTCAACCTATTCCTCATGCTATAGTTGTTATTCCTGGTCTACAAT
TGAAGTTATCTTAA