Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g010300.2.1
CDS Infomation

GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (AHRD V3.3 *** Q6A4W9_MALDO)
Sequence

ATGGCTTCAATTCAAAATTCAATGGTTTTTTCTCATTTGAGATCCGACCATGGTCTGTAT
TTCATCAATCCAACAACGACAAACTATAAATCAGATTTGTCCTCGCTAAGTTTTACTAGA
AAGTTTCCCTTCAGCTTCAAAAGTGGAAGAGGATTACTACGGGCTACATTATTATCAGGA
GAAGATGATATTTTGTCTTGTTTTAACAACCAAGGTGCAGAAAGAGGTTCTTTTGTTAAT
CATGGAGCCGAACAAACTATAATTAAGCAACAACCTGGTGAAACAGCTTTTGAAACACCT
GCTACCGTAATAACTCCAAACAGTGGGTTTCTCTCTGGTGTTGATGAATTTGACTTGGAT
CATGCCGTTGAAGGATTCTCTTCTATTCCGGAAGCTATTGAGGATATTCGTCAGGGCAAG
ATGGTAATTGTCGTAGATGATGAAGACCGAGAAAATGAGGGTGATTTAATAATGGCAGCA
CAATTGGTGACACCTGAAGCAATGGCCTTCATTGTAAAACATGGAACTGGAATTGTGTGC
GTGAGTATGAAAGGTGAAGATCTAGACAGGCTTCAACTTCCACTAATGGTGCCACCAAAG
GAAAATGAGGAGAAACTCAGTACTGCTTTCACTGTGTCTGTGGATGCAAAATATGGTACC
ACAACAGGTGTATCTGCACATGATAGGGCAAAAACAGTTTTGGCTCTAGCATCTGCTGAT
TCAAAACCCGAGGATTTCAATCGACCTGGACACATTTTCCCACTCAAGTATAGAGAAGGA
GGGGTGCTAAAAAGAGCTGGCCATACTGAAGCTTCTGTTGATCTTGCTGTATTGGCTGGG
CTGGACCCTGTTGCTGTTCTTTGTGAAATTGTGGATGATGATGGTTCCATGGCCAGGTTG
CCTAGGCTTCGTCAATTTGCTGAGGCTGAGAACTTAAAGATTGTATCCATTGCCGATTTG
ATCAGGTATAGAAGGAAAAGAGAGAAACTGGTAGATCTCGCTGCTGCTGCACCTATACCA
ACAACGTGGGGACCTTTTAAAGCGTACTGTTTTAAGTCTGTCTTGGACGGAATTGAACAT
ATTGCCATGGTCAAAGGTGATATCGGAGATGGGAAAGATGTCCTTGTCAGAGTACACTCG
GAGTGTCTCACTGGTGACATATTTGGGTCAGCCCGATGTGACTGTGGTAAGCAGTTAGCG
CTTGCAATGAACCAAATTGAACAAGCTGGAAGGGGTGTGTTAGTATATCTCCGCGGGCAT
GAAGGAAGGGGAATAGGTTTGGGACATAAACTTCGTGCTTACATCCTGCAAGATGATGGG
CATGACACGGTTGAAGCTAATGAAGAGCTGGGACTACCAGTTGATTCACGCGAGTATGGC
ATTGGCGCACAGATTCTACGAGATTTGGGTGTTCGTACAATGAAACTGATGACAAACAAC
CCCGCGAAGTATGTTGGGCTCAAAGGATATGGTCTGGCAATTTCAGGTAGAGTTCCCCTG
TTGGCTCCTATAACTAGAGAAAATAAGAGGTACTTAGAGACCAAACGCGTGAAATTGGGG
CACATATATGACTCCAATGACGATGCCAATGGCCACGTTAATAGTTCTGAAGTTGATAGA
ACGAGCCACGATGAGTTACATGACAACGCTGACTGA

Peptide Sequence

PEP ID

Solyc11g010300.2.1
PEP Infomation

GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (AHRD V3.3 *** Q6A4W9_MALDO)
Sequence

MASIQNSMVFSHLRSDHGLYFINPTTTNYKSDLSSLSFTRKFPFSFKSGRGLLRATLLSG
EDDILSCFNNQGAERGSFVNHGAEQTIIKQQPGETAFETPATVITPNSGFLSGVDEFDLD
HAVEGFSSIPEAIEDIRQGKMVIVVDDEDRENEGDLIMAAQLVTPEAMAFIVKHGTGIVC
VSMKGEDLDRLQLPLMVPPKENEEKLSTAFTVSVDAKYGTTTGVSAHDRAKTVLALASAD
SKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLDPVAVLCEIVDDDGSMARL
PRLRQFAEAENLKIVSIADLIRYRRKREKLVDLAAAAPIPTTWGPFKAYCFKSVLDGIEH
IAMVKGDIGDGKDVLVRVHSECLTGDIFGSARCDCGKQLALAMNQIEQAGRGVLVYLRGH
EGRGIGLGHKLRAYILQDDGHDTVEANEELGLPVDSREYGIGAQILRDLGVRTMKLMTNN
PAKYVGLKGYGLAISGRVPLLAPITRENKRYLETKRVKLGHIYDSNDDANGHVNSSEVDR
TSHDELHDNAD*

Transcript Sequence

Transcript ID

Solyc11g010300.2.1
Transcript Infomation

GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (AHRD V3.3 *** Q6A4W9_MALDO)
Sequence

AATAATTTGTCTATATATACTTCAACCGACTATGAAACGATGCTAAAATCATCTTAATCC
AACGGTTCATATTCAAAGTCCTCATGATCCCTAAACAGTGGCCTTTAACAGCTCCATTGA
GCATCTTCTCGTAGCTGCTTTTTTTTATCCACAACATCTTTTTAAGCTTTCTTCAATTTC
ATCAAAGATTATATAACTTTTATACTCAAATTGGGTCAGCATAATAATGGCTTCAATTCA
AAATTCAATGGTTTTTTCTCATTTGAGATCCGACCATGGTCTGTATTTCATCAATCCAAC
AACGACAAACTATAAATCAGATTTGTCCTCGCTAAGTTTTACTAGAAAGTTTCCCTTCAG
CTTCAAAAGTGGAAGAGGATTACTACGGGCTACATTATTATCAGGAGAAGATGATATTTT
GTCTTGTTTTAACAACCAAGGTGCAGAAAGAGGTTCTTTTGTTAATCATGGAGCCGAACA
AACTATAATTAAGCAACAACCTGGTGAAACAGCTTTTGAAACACCTGCTACCGTAATAAC
TCCAAACAGTGGGTTTCTCTCTGGTGTTGATGAATTTGACTTGGATCATGCCGTTGAAGG
ATTCTCTTCTATTCCGGAAGCTATTGAGGATATTCGTCAGGGCAAGATGGTAATTGTCGT
AGATGATGAAGACCGAGAAAATGAGGGTGATTTAATAATGGCAGCACAATTGGTGACACC
TGAAGCAATGGCCTTCATTGTAAAACATGGAACTGGAATTGTGTGCGTGAGTATGAAAGG
TGAAGATCTAGACAGGCTTCAACTTCCACTAATGGTGCCACCAAAGGAAAATGAGGAGAA
ACTCAGTACTGCTTTCACTGTGTCTGTGGATGCAAAATATGGTACCACAACAGGTGTATC
TGCACATGATAGGGCAAAAACAGTTTTGGCTCTAGCATCTGCTGATTCAAAACCCGAGGA
TTTCAATCGACCTGGACACATTTTCCCACTCAAGTATAGAGAAGGAGGGGTGCTAAAAAG
AGCTGGCCATACTGAAGCTTCTGTTGATCTTGCTGTATTGGCTGGGCTGGACCCTGTTGC
TGTTCTTTGTGAAATTGTGGATGATGATGGTTCCATGGCCAGGTTGCCTAGGCTTCGTCA
ATTTGCTGAGGCTGAGAACTTAAAGATTGTATCCATTGCCGATTTGATCAGGTATAGAAG
GAAAAGAGAGAAACTGGTAGATCTCGCTGCTGCTGCACCTATACCAACAACGTGGGGACC
TTTTAAAGCGTACTGTTTTAAGTCTGTCTTGGACGGAATTGAACATATTGCCATGGTCAA
AGGTGATATCGGAGATGGGAAAGATGTCCTTGTCAGAGTACACTCGGAGTGTCTCACTGG
TGACATATTTGGGTCAGCCCGATGTGACTGTGGTAAGCAGTTAGCGCTTGCAATGAACCA
AATTGAACAAGCTGGAAGGGGTGTGTTAGTATATCTCCGCGGGCATGAAGGAAGGGGAAT
AGGTTTGGGACATAAACTTCGTGCTTACATCCTGCAAGATGATGGGCATGACACGGTTGA
AGCTAATGAAGAGCTGGGACTACCAGTTGATTCACGCGAGTATGGCATTGGCGCACAGAT
TCTACGAGATTTGGGTGTTCGTACAATGAAACTGATGACAAACAACCCCGCGAAGTATGT
TGGGCTCAAAGGATATGGTCTGGCAATTTCAGGTAGAGTTCCCCTGTTGGCTCCTATAAC
TAGAGAAAATAAGAGGTACTTAGAGACCAAACGCGTGAAATTGGGGCACATATATGACTC
CAATGACGATGCCAATGGCCACGTTAATAGTTCTGAAGTTGATAGAACGAGCCACGATGA
GTTACATGACAACGCTGACTGAAAATCGTCTAAACAACCGCAGTGAAAAAACTGATTTGA
GCATTTTCTAGTAGCCTGTTCCAAACATTTTTTTAGCTCTGTTGGATAAATGTACTTTTT
TTCTTCTTCTTTTGCTCATGTAGAAGAGTTCAAGGGGGAAGTGATCACAAAAGTTTTGAA
GAAACATTTGTGGTGTTGGTGAAGTTATCTCAAACTTGTTTGGGATCGAGTCGTAGTTAA
TTGGATAAAACTCTCTACAAACGGCCTATTTT