Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g008730.2.1
CDS Infomation

U11/U12 small nuclear ribonucleoprotein 25 kDa (AHRD V3.3 *** A0A0B0PJE8_GOSAR)
Sequence

ATGGGGCATCATGAGACGAATTCGTCCAGTAGTAGGGACAGGTCTCCTTCTCAACAGAGG
CACAGACATCGGCGTAAGGAGAGAGATTTGGATAGAGAATTGTCATATGAAAAAAGAGAA
CGAAGGTCAGGAAGAGATGTAATTGAGCATAGGTCTCCTAGGCCAAGAAATGATTACTCT
TTTTCGGGTTCAGGTCATCAAAGAATGGCACATCAGAGACCCAGTTCAAATTTTAGTGTT
GACACAGAAAGAAAAAATGAGGCGTTCGACCCAACTGATTCTGAAAACCGGAAGGATAGA
GATGTTAGCATGGATAAAACGAAGGCAGATGAACAGGACCTGGAAGCTAAAAAGGAGCAA
ATGACATTGTTAGAGATGTCCGGAGATCTTACTACAGAACCTAAACAACTCACAGAGGGA
AGAAAGGAGGAAACCAACGTGTCACTGGAATATAGTAGTGACATGAAGAAGGCAAGACTC
CATTCAACACTGGTTGCTCTCCTCAACGATCCTGTGCTTGCTGATATACCAAAAAACCCA
ACTCTGACGGATGTGGACACCCTTATCAGCTTGGAACTTGGGAGTGCCATGCGTATCTCT
GTCCTCAAATTGGATGGCAGCTCCTTTGATGTGACAGTGATGAATTCGGCAACAGTTAAA
GACTTGAAACAAGCTGTTCGGAAAAGGATTGATGACACCGAGCAATCTAAGATGGGCCAT
CGGCACATCTCTTGGAGGCATGTCTGGTCAAATTTTTGCCTTCTATTCCACAATGAGAAG
TTACTAGATGATACTGCTAAACTTCAGGACTACAGCATTAGGAACAATGCTCAGGTGCAA
TTCGTTCCCTATGTCATCTCGAGGGCCTTTAAGAGGCATTCAAAGAGGAGAAAGCACAGA
TTCTTTCATGGACTAAGCAAAAAGGGGCGCACAACAGATTGA

Peptide Sequence

PEP ID

Solyc11g008730.2.1
PEP Infomation

U11/U12 small nuclear ribonucleoprotein 25 kDa (AHRD V3.3 *** A0A0B0PJE8_GOSAR)
Sequence

MGHHETNSSSSRDRSPSQQRHRHRRKERDLDRELSYEKRERRSGRDVIEHRSPRPRNDYS
FSGSGHQRMAHQRPSSNFSVDTERKNEAFDPTDSENRKDRDVSMDKTKADEQDLEAKKEQ
MTLLEMSGDLTTEPKQLTEGRKEETNVSLEYSSDMKKARLHSTLVALLNDPVLADIPKNP
TLTDVDTLISLELGSAMRISVLKLDGSSFDVTVMNSATVKDLKQAVRKRIDDTEQSKMGH
RHISWRHVWSNFCLLFHNEKLLDDTAKLQDYSIRNNAQVQFVPYVISRAFKRHSKRRKHR
FFHGLSKKGRTTD*

Transcript Sequence

Transcript ID

Solyc11g008730.2.1
Transcript Infomation

U11/U12 small nuclear ribonucleoprotein 25 kDa (AHRD V3.3 *** A0A0B0PJE8_GOSAR)
Sequence

GAACAGCTATTTCTGCTCCTATTTGGAGCATGATTTTCAGTTCCAGAAAATTTTCATCAG
CCCAGTAAGTATATATACAATAAGAACTCCAAATTAGATGATTTTTTTCAGATAAATACA
TTGGTTGTATAAGTGTGTAATTCTGATGGGGCATCATGAGACGAATTCGTCCAGTAGTAG
GGACAGGTCTCCTTCTCAACAGAGGCACAGACATCGGCGTAAGGAGAGAGATTTGGATAG
AGAATTGTCATATGAAAAAAGAGAACGAAGGTCAGGAAGAGATGTAATTGAGCATAGGTC
TCCTAGGCCAAGAAATGATTACTCTTTTTCGGGTTCAGGTCATCAAAGAATGGCACATCA
GAGACCCAGTTCAAATTTTAGTGTTGACACAGAAAGAAAAAATGAGGCGTTCGACCCAAC
TGATTCTGAAAACCGGAAGGATAGAGATGTTAGCATGGATAAAACGAAGGCAGATGAACA
GGACCTGGAAGCTAAAAAGGAGCAAATGACATTGTTAGAGATGTCCGGAGATCTTACTAC
AGAACCTAAACAACTCACAGAGGGAAGAAAGGAGGAAACCAACGTGTCACTGGAATATAG
TAGTGACATGAAGAAGGCAAGACTCCATTCAACACTGGTTGCTCTCCTCAACGATCCTGT
GCTTGCTGATATACCAAAAAACCCAACTCTGACGGATGTGGACACCCTTATCAGCTTGGA
ACTTGGGAGTGCCATGCGTATCTCTGTCCTCAAATTGGATGGCAGCTCCTTTGATGTGAC
AGTGATGAATTCGGCAACAGTTAAAGACTTGAAACAAGCTGTTCGGAAAAGGATTGATGA
CACCGAGCAATCTAAGATGGGCCATCGGCACATCTCTTGGAGGCATGTCTGGTCAAATTT
TTGCCTTCTATTCCACAATGAGAAGTTACTAGATGATACTGCTAAACTTCAGGACTACAG
CATTAGGAACAATGCTCAGGTGCAATTCGTTCCCTATGTCATCTCGAGGGCCTTTAAGAG
GCATTCAAAGAGGAGAAAGCACAGATTCTTTCATGGACTAAGCAAAAAGGGGCGCACAAC
AGATTGAATCAGGGATTAGACTGCTGCTAGCTCGTGCTCGTAATAGCAAATGTTGTTGTA
AAGTCTAGGAGCCTTTCGCTTTCCCTGATCATATTATGTTGAAAATACTCAGCTAACTAT
CTTCGAGATGAGCTTAATGCAGTGAAAATGGCCAACATATATTTATATAGCCGATCTCTA
CTCGTTGGAATTGAGGTGTAGTAGTTGTCATTGTTCAACTGTCTAGTAGGAGAACTACCC
AAAAAAAGGTTTGGAAGTTCATCTAACACTTGAACTGGATATATGTACTAATCATTAGAT
CTAAATATACAATCACAAAAGGGAAGGTTTGGCTATTAATCTACGCTCATTGATGAGACG
ATAGTGAAAATGTGTAGTTTTCACTAAGTTATTCTATTATTTCCTTTTTATTGGTATAAT
TTTGTTTTTTATGTCTATGTAAGTGAAAAGATTGGGGCCAAAAACAAAAATAATAGAGTA
AAAACTTGTGAATATCAAATCAACATCTTATACAAGGGAAATTTTAGTAGATAAAAAACA
CACAATACACATCCTAATAATGCATTTCCACATTTTGTAACAAGGCAAAAGTTATGATGA
TAACTTGCAGAATAATTGAACTATGTATGGTATCAAAAACCTAAATAAATATAAAAGCGA
ATATTTTTCTTTATTACGAAAATAAAGAAGAGAAAATTAGAAAAGAAGCATGGCCAGATA
TTATACAGGATATTTACATATAAATAAGATCTACATTGTACAACAGAGTGCTGCAACACA
CACACCTGTGTCAAATGATCTACTCTGCCAGCCAAGTAAAAACCTAACTACATGACCATC
AAAACATGACTGTAAAGAATGAACTATAGCAAGAGTAGACCACAAACTGACCCAATTGAC
TAACTACTAGGAAATACATATTTCTGTTTACCAACTTCTTCATGTTTATATCCTTTCTTC
CCTACCAAACATATCAGATTCAAAAGTCCGATTTCATAAGCTTCATTCCAGGCTTTATTG
TGATATCGTCAAAGGGTATCACTTGCTCTACATGAAGGTAATCTCTTGTTTTAAGAACCT
GCGGTAACACACAGATACCGGATTAAAATTCCATACGAGAATGTCAAAAAAAAAAAAAGG
TCTCAGGCGTTGCACGTACCAAAGTTTCAAAAAACATCCTTGATGCCTCCTTTCGTGTTT
TACCAACTAATAAACTGTCCATGGAGAGAGACGTTCTGCCACGCTCAGATTCTTTAATAA
ACAAGGTTTGGAGGTATTTGGAAACAGCCCTGTGTATACAAACATCAATGTGGAACTCTG
GCTGAACTTTTTGTTCATAAATAATATCATCATAAAGATCAGACAACAGTAGAATAAATA
GCAGAGCCTGTCTATAGGTAAAACGAAAGGAGATTAAAGCCTTTGGACCAATATCCCAGT
TGTAAATTTCGAGCAAGTATGTTCTCATTTTATCATTTGAAGTTAAAAAAAAAAAAAAAT
CTGGGGTTACACTATGGAACACATCTACCAACCTTCTTATACCATCCATTCTCTAGGTAG
GATGGAGATAAGTTTCTTTAGACAGCCTTACCTTAACTCCAACCACAAACTACTTTCTTG
GAGAAGATTCTTCGATTTATGTTAAAGTGCAGCTGCTGTATTCAGTAGGTATGATCCTTT
CAATTTTCAAAAGGAAATGATTTTCTTCGCTTATCTATCCTGCAGTTAACCACTCTTTCC
AGTCTAAAGCATCAAGGGGTGCATTTTACACCAATGAAGTTTCTTTGACATTTTTATCAA
CCTGTATCACGTCTTCATCTTCTTCAATTTATGTAATATAAAAAAAATAAACTCCAGCAG
TTCAAATATGATTTTTTTTTAAAATGGAATCATTGTATTTATAAACAGCATAAAGTTTGT
GATGGAATTACAGTATAGTGAGCAGAAACACCAAAAAGATAAG