Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g008490.2.1
CDS Infomation

Pumilio-like protein (AHRD V3.3 *** A0A0B0PW20_GOSAR)
Sequence

ATGAGATATACTTTTCCTTTTCAGGAAGGACTTGACCAATCTGCACTCGCGCCTGCTGAT
CTTTCACACGCTGAAAGCACGGAACACACAAAGACATCACACACTGGAAATGCTCCTCCC
GGCTTTTCTGGATTGGAGAAGATTCAGAATCCTAATCCACATCACCCTGATTCTTCTGCA
TCTGCCATCAATTCAATGATAAGGAGTGGAACACCTGACCCTCGTTCATTTACAAGATCA
CCTAGTCCCAAGATTTCAATTGACATAACTAGCCCAAATGGCCTCAATGCCGATGTATCT
GATCTTACTGCCTCATTATCTCGCCTTCAACATGACGATAATATGCAGCAGACTTGGCTT
CAAAATAGACTATCAAATGGTTATAGGCAGGGCGTGCAACATCAGCTAAATGAATACTAT
GGAGCTGAAAATTTAGGTACTGTTTCCGATTATGCTGACCATAATTCCACATTCTACCTT
GATGGACATACGGATTACCTCAGTCCTGAGTTTGTGAGTCAAAACTCTAGAGTCCAACAA
CACATCAATAACAATCACGTTGTTGATTCTACCGGATATTTACCTGGTGGATACAAATAT
AACCCGAAGATGGTGTTGAATAACAATCTTGGTTCTCATTTAAATGGTGTCAATGGGAAT
GGACGTCATCTGAGGAGTGATCCGAAATATGCAACTTCTCATGGCAATACAGAATTAAAA
GTTCTTGGAACAATGTATGCTGATACAGCATCACTCCCGCAACAGAAGCAACAATATTGC
CCTTCCTTAATACGTAATTCTTGCAATTTAACGGATAGGTATCATGTGATTCATGCTCTT
GGCTCAGGCCAAGAGAATAAAATAGCAAATTCATTGTATGTGACAGTAGGATCGAGAAGT
CCTATGTATCAGAGTGATCCTCTCCCACAGATTCCTCCTGCCTTGAGAAATCCTACCGAT
GAATCTAAAAGTTCATGGCATTCGGAGAACGTTACTGATGGAAATGTTTCACTGTCTCTA
CTGGAAGATCTCAAGAACAACCCCAGGTCGTTGGATCTTTTGGATGTTCTTAATCATGTT
GTCGAATTCAGTAAGGATCAGTACGGGAGTCGATTTATTCAAAAGAAGCTGGAAACTGCC
ACTGTCGAAGAAAAGATGAAGATATTCCCCGAAATTCTTCCTCATGCTCACAGTTTAATG
ACAGATGTCTTTGGGAATTATGTCATACAAAAGTTCCTCGAGCATGGAACGGAGAGTCAA
AGAAAGGAACTAGCAAGGCAACTTCTCGGTCATGTTTTGCCTCTGAGTCTTCAAATGTAT
GGTTGCAGAGTTATTCAGAAGGCTTTGGAAGTCTTTGATGTGGAACTGCAGAAGCAAATG
GCTACAGAACTAGATGGCTATGTGATGAAATGTGTTCGTGATCAGAATGGTAATCATGTT
ATTCAGAAGTGCATAGAGTATGTACCTCAAAATCGAATTCACTTTATTGTAGCTTCCTTC
TTCGGGCATGTTGGGTCTCTATCAACACATCCTTATGGCTGCCGTGTCATTCAGCGAGTC
CTTGAGTACTGCAATAACCCGGAGACACAAAAGACCATCATGGATGAAATAATGCAGGCT
GCCGGTACTCTAGTGCTTGATCAATATGGAAATTATGTCATTCAGCATGTACTGCAACAC
GGTAAACCACATGAGAGGTCTGAGATAATAGGCAAACTTACTGGACAAATTGTAAAGATG
AGTCAGCACAAGTACGCTTCTAATGTCGTTGAAAAGTGCTTGATTTTTGCAACTCCAGAG
GAGCGTCAAATTCTGGTGAACGAAATGCTTGGTTCGACACAAGAAAATGAGCCTCTACAG
GTCTGTTACTATTCTTTAATTTACACAGATTTTGCACCATTCTGTTCTGCATTAGAAAGG
TAA

Peptide Sequence

PEP ID

Solyc11g008490.2.1
PEP Infomation

Pumilio-like protein (AHRD V3.3 *** A0A0B0PW20_GOSAR)
Sequence

MRYTFPFQEGLDQSALAPADLSHAESTEHTKTSHTGNAPPGFSGLEKIQNPNPHHPDSSA
SAINSMIRSGTPDPRSFTRSPSPKISIDITSPNGLNADVSDLTASLSRLQHDDNMQQTWL
QNRLSNGYRQGVQHQLNEYYGAENLGTVSDYADHNSTFYLDGHTDYLSPEFVSQNSRVQQ
HINNNHVVDSTGYLPGGYKYNPKMVLNNNLGSHLNGVNGNGRHLRSDPKYATSHGNTELK
VLGTMYADTASLPQQKQQYCPSLIRNSCNLTDRYHVIHALGSGQENKIANSLYVTVGSRS
PMYQSDPLPQIPPALRNPTDESKSSWHSENVTDGNVSLSLLEDLKNNPRSLDLLDVLNHV
VEFSKDQYGSRFIQKKLETATVEEKMKIFPEILPHAHSLMTDVFGNYVIQKFLEHGTESQ
RKELARQLLGHVLPLSLQMYGCRVIQKALEVFDVELQKQMATELDGYVMKCVRDQNGNHV
IQKCIEYVPQNRIHFIVASFFGHVGSLSTHPYGCRVIQRVLEYCNNPETQKTIMDEIMQA
AGTLVLDQYGNYVIQHVLQHGKPHERSEIIGKLTGQIVKMSQHKYASNVVEKCLIFATPE
ERQILVNEMLGSTQENEPLQVCYYSLIYTDFAPFCSALER*

Transcript Sequence

Transcript ID

Solyc11g008490.2.1
Transcript Infomation

Pumilio-like protein (AHRD V3.3 *** A0A0B0PW20_GOSAR)
Sequence

CCAAAAAAAAAAATCCCTCATGCACGTAAAACCACAACACATCCCTAACAATAGGAGTAC
ACGTAATTAATTATCAGTCATAAAAGAATTGAACAACCTTAATAATTGCTTAATTAACGT
TTGATTAAGTCTTAATCTAAGAACTTCCTCATCTTTCATGTTCTAACCCCAACCCCTTTT
ACTAGATTGTCGTATGGAAGCTTGAGAAGAAAAAAAAAACATCAAGATTTTCCATCAATT
TGACATGACTAAAGGGGGTGTGGAAGATAACATTGTTCTGTCTAGTGTGAATGTGAGTAA
TGTTGATAAGATGTTGGCACCAAATTATAATGGGAATTTGAAGGGAAAGAACAGTTTGGA
GAGTGAGCTCGAGTCGATACTTGTGAGGCAACAGCAACGTCAACATGATCGTGATATTGT
TGGTGAACGTGAGAGGGATTTGAATATATCGAGGAGTGGTAGTGCTCCTCCTACTGTCGA
AGGATCGTTGAGTGTTGTTGGAAGTTTGTTTAAGAATTCTAACTTAGCACAATCTAATAG
TAGTAACAATGGTGGTGGTGGTGGTAATTCAAGCAATGACATTTTGACAGAAGAGCAAAT
TCGATCACACCCTGCGTACTTGGCGTACTATTACTCAAATGTCAATCTTAATCCTAGATT
GCCCCCTCCGTTGATGTCTCGAGAAGATTGGAGAATTGCTCAGAGGGTTCAGGCAGGAGG
ATGTGCTTTTATGAGCAAGAATTTGATGGAACAAGGTGGTGGTTCATCATTGTTCGCGAT
GCAACCTGGTTTCCCTATACAGAGGGCGGAAGACGAGTTGATTAAGCTGAGGAAGACTGC
TGCGAGGAATCTGTCACGAGGAACATTGGAATCCAACACTGGAATTGGTGTGAGGAAAAA
GAGTTTTGCGGACATAGTTCAGGTGATCTCTCTTGACTTGTGCTTGTATATTTGCTTTAT
TTCGAAATGCTTCTATTGACGTGTACCAATACTTTCTCAAGTTGACATGTGTTCGTGACA
AATTAACGTTCATATGAAAGTTATCATCTTTTCAATATCTATCATGTCAAATCGTCGAGA
AAATGCAGAAACGTACCTGAATCCATGAGTTCTAATGAAGACAACCGCGTTCTCCTCCTC
CACTTCTCATGTTGCTTCCGAATCTTCTGAATTAAGATGAGATATACTTTTCCTTTTCAG
GAAGGACTTGACCAATCTGCACTCGCGCCTGCTGATCTTTCACACGCTGAAAGCACGGAA
CACACAAAGACATCACACACTGGAAATGCTCCTCCCGGCTTTTCTGGATTGGAGAAGATT
CAGAATCCTAATCCACATCACCCTGATTCTTCTGCATCTGCCATCAATTCAATGATAAGG
AGTGGAACACCTGACCCTCGTTCATTTACAAGATCACCTAGTCCCAAGATTTCAATTGAC
ATAACTAGCCCAAATGGCCTCAATGCCGATGTATCTGATCTTACTGCCTCATTATCTCGC
CTTCAACATGACGATAATATGCAGCAGACTTGGCTTCAAAATAGACTATCAAATGGTTAT
AGGCAGGGCGTGCAACATCAGCTAAATGAATACTATGGAGCTGAAAATTTAGGTACTGTT
TCCGATTATGCTGACCATAATTCCACATTCTACCTTGATGGACATACGGATTACCTCAGT
CCTGAGTTTGTGAGTCAAAACTCTAGAGTCCAACAACACATCAATAACAATCACGTTGTT
GATTCTACCGGATATTTACCTGGTGGATACAAATATAACCCGAAGATGGTGTTGAATAAC
AATCTTGGTTCTCATTTAAATGGTGTCAATGGGAATGGACGTCATCTGAGGAGTGATCCG
AAATATGCAACTTCTCATGGCAATACAGAATTAAAAGTTCTTGGAACAATGTATGCTGAT
ACAGCATCACTCCCGCAACAGAAGCAACAATATTGCCCTTCCTTAATACGTAATTCTTGC
AATTTAACGGATAGGTATCATGTGATTCATGCTCTTGGCTCAGGCCAAGAGAATAAAATA
GCAAATTCATTGTATGTGACAGTAGGATCGAGAAGTCCTATGTATCAGAGTGATCCTCTC
CCACAGATTCCTCCTGCCTTGAGAAATCCTACCGATGAATCTAAAAGTTCATGGCATTCG
GAGAACGTTACTGATGGAAATGTTTCACTGTCTCTACTGGAAGATCTCAAGAACAACCCC
AGGTCGTTGGATCTTTTGGATGTTCTTAATCATGTTGTCGAATTCAGTAAGGATCAGTAC
GGGAGTCGATTTATTCAAAAGAAGCTGGAAACTGCCACTGTCGAAGAAAAGATGAAGATA
TTCCCCGAAATTCTTCCTCATGCTCACAGTTTAATGACAGATGTCTTTGGGAATTATGTC
ATACAAAAGTTCCTCGAGCATGGAACGGAGAGTCAAAGAAAGGAACTAGCAAGGCAACTT
CTCGGTCATGTTTTGCCTCTGAGTCTTCAAATGTATGGTTGCAGAGTTATTCAGAAGGCT
TTGGAAGTCTTTGATGTGGAACTGCAGAAGCAAATGGCTACAGAACTAGATGGCTATGTG
ATGAAATGTGTTCGTGATCAGAATGGTAATCATGTTATTCAGAAGTGCATAGAGTATGTA
CCTCAAAATCGAATTCACTTTATTGTAGCTTCCTTCTTCGGGCATGTTGGGTCTCTATCA
ACACATCCTTATGGCTGCCGTGTCATTCAGCGAGTCCTTGAGTACTGCAATAACCCGGAG
ACACAAAAGACCATCATGGATGAAATAATGCAGGCTGCCGGTACTCTAGTGCTTGATCAA
TATGGAAATTATGTCATTCAGCATGTACTGCAACACGGTAAACCACATGAGAGGTCTGAG
ATAATAGGCAAACTTACTGGACAAATTGTAAAGATGAGTCAGCACAAGTACGCTTCTAAT
GTCGTTGAAAAGTGCTTGATTTTTGCAACTCCAGAGGAGCGTCAAATTCTGGTGAACGAA
ATGCTTGGTTCGACACAAGAAAATGAGCCTCTACAGGTCTGTTACTATTCTTTAATTTAC
ACAGATTTTGCACCATTCTGTTCTGCATTAGAAAGGTAA