Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g008250.2.1
CDS Infomation	P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 - AT3G10420.2)
Sequence	ATGAGTGCTTTGTATTCCACTTTTATCTTGATTGATCTTCAAAGTTCTTGGTATTCAGCT AAACAGATACCCAATTCCACTTTTTGTTATTTAAATAAGTCCACGTTCTCAGCGGCATTT CGTCGAACACGTGGTGGGCGGGGTAGATTTCCGGCGCCGGCGGCGTCGATTCAGTCACCG GGAATCAGGAGACCAAGGGAACGTCCCGTTGCCGGAAATGGGTTGTCGTTGTTTTCTCCT AATTCACCTTCTACTTCGAGTTCTGAGGATGAGGTTGTGTCTGATTTGGACTTGTTCTTG GAGTTAGTGCCACTGAGGATGAGGAATGAACTATTTATGCATCAGGAGATTGGGAAGTTG GTTGAGATAGTTATGGATTTAGGCAGAAAGCCCCTCGCGCGATTTCCTTCCGGTGATTGG ATCATTTCTGAGCAGCCTGTAATGCTTGAGGATCTTCACCATGCCATTTCAAAGGTGGGG GATTTCTCAGATGACAACCGTTCGGGTATTGACAGTTCCCTACATCGTATTAGTGCAATT AGAAACCGTAAAATGCAAATTATTGGCCTTACCTGCCGGGTTGGTCGAGCTGTATCTGGA AGTGCTGAGATCATACGTGACTTGGTCGAAGAAGGTGGTTCCATATTGGTGATAGGTCCT CCAGGAGTTGGTAAAACTACCTTAATCAGAGAAATAGCCAGAATGCTGGCAGATGACCAG AAGAAACGAGTCGTTATTGTTGATACATCTAATGAGATTGGAGGCGATGGAGATGTTCCT CATTCAGGAATTGGTTGTGCAAGAAGGATGCAAGTCCCAAATGTTAACCTGCAGCATAAT GTAATGATTGAAGCAGTTGAAAACCATATGCCCCAAACCATCATCATAGATGAAATAGGG ACAGAGCTTGAAGCGTTGGCTGCTAGTACAATTGCTCAGAGAGGAGTACAGCTTGTTGGG ACTGCTCATGGAAGTACGATTGAGAGTATAGTAAAAAATCCATCTTTACAGATGCTTGTT GGTGGCATAGAGAGTGTTACTCTGGGTGATGAGGAAGCAAGGAAAAGGAAAGTACAGAAA ACAATTCTCGAGAGGAAAGGTCCTCCAACCTTCACATGTGCTGTTGAGATGATATCAAGA ACTCAATGTCGTGTTCACCATAGACTAGATTTAACAGTAGATGCTTTATTAGCAGGAAAA TCTCCTTTGTTTGAGATACGGGGATTGGATAGTGAAGCCGAAAATTCGATCGAGTCTTCT CCTTTCACTCAAGAGGACGATGTTAATGACTTTGAGCTAATTGATAAAGTAGAAAAGAAG GATAAAATGGAGTCTGATAGGGAATATATAAAAAAGAAACCTAAAGTGGAGTCTGATATG GAGTATGTAAAAAAGAAAGACAAAGTGGAGTTTGACATGGAGTATGTAAAAAAGAAAGTT AAACTAGAGTCTGATAGGGAGTATGTAAAAACGAAAGATAAAGTAGAGTATGTAAATTAT AGTAAGCAATCCAGTAAAGAAGACAAAAAGGTACAATTTGAATCAGACGAGGAAGATGAT GATCATCCCAATTCCAAGAAATCAGGCACCAGTGGATATGCCAGCAAAAAAACCTCTCCT GTGTTTGTTTATACTTATAAGATTCAAGAAGCTGATCTATTGCAAGTTGCAACTGTTATG GGGCTAGAGGAAGAAATTGAAGTAACAGATGATATTGGTATTGCAGATGCTATTTTAGCA TCTAGTGCTGAAATGAAGCAGAATCCTTGGATTCGTAGCGTTGCCAAATTTCATCAAGTG CCTGTCTTTGTTGTAAAGTCAAATACCATGGCACAGATGGTGAAGGCTATCCGTATGATT CTTGGAATGGATTCTATTCACTCAAAACAACCATTGAAAGATTCATCAGATATTGAAATT CAAGATGATGCACCGAAAAGGAGACCTACATTGGAGGAGATCGATGCCTTAGAGGAGGTC CGCCTTGCAATTGAGTACATCGTCATACCTGGTGGTGAGGCTGTTGAGCTTCTCCCAAGG CGCTCTGAGATAGTTGCCCAACAACTCAAGTTGGTTGAGAGTTATCAGTTGGCTGCAGAA AATTCAGGTACCGAATCAAACCCGAGACTGCAAATCCTTCCACAGAAACTATACAGGAAG ACTTCTGTAAAGACCTTGAGATCCAGTTCAAGTCGGAACAGCACAGGTTCCGACTCATGG ATTGGTAAGAACGGAGGCACTGGTGTTGCTCGACTCCCTTTCTTGCCTGAATAA

Peptide Sequence

PEP ID	Solyc11g008250.2.1
PEP Infomation	P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 - AT3G10420.2)
Sequence	MSALYSTFILIDLQSSWYSAKQIPNSTFCYLNKSTFSAAFRRTRGGRGRFPAPAASIQSP GIRRPRERPVAGNGLSLFSPNSPSTSSSEDEVVSDLDLFLELVPLRMRNELFMHQEIGKL VEIVMDLGRKPLARFPSGDWIISEQPVMLEDLHHAISKVGDFSDDNRSGIDSSLHRISAI RNRKMQIIGLTCRVGRAVSGSAEIIRDLVEEGGSILVIGPPGVGKTTLIREIARMLADDQ KKRVVIVDTSNEIGGDGDVPHSGIGCARRMQVPNVNLQHNVMIEAVENHMPQTIIIDEIG TELEALAASTIAQRGVQLVGTAHGSTIESIVKNPSLQMLVGGIESVTLGDEEARKRKVQK TILERKGPPTFTCAVEMISRTQCRVHHRLDLTVDALLAGKSPLFEIRGLDSEAENSIESS PFTQEDDVNDFELIDKVEKKDKMESDREYIKKKPKVESDMEYVKKKDKVEFDMEYVKKKV KLESDREYVKTKDKVEYVNYSKQSSKEDKKVQFESDEEDDDHPNSKKSGTSGYASKKTSP VFVYTYKIQEADLLQVATVMGLEEEIEVTDDIGIADAILASSAEMKQNPWIRSVAKFHQV PVFVVKSNTMAQMVKAIRMILGMDSIHSKQPLKDSSDIEIQDDAPKRRPTLEEIDALEEV RLAIEYIVIPGGEAVELLPRRSEIVAQQLKLVESYQLAAENSGTESNPRLQILPQKLYRK TSVKTLRSSSSRNSTGSDSWIGKNGGTGVARLPFLPE*

Transcript Sequence

Transcript ID	Solyc11g008250.2.1
Transcript Infomation	P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 - AT3G10420.2)
Sequence	ATGATACATTACGAAACATAACATCGAGACAAGCAAATGACCATTCAAACTTTTTGAACA AAAATGTTTTCTAGCAAGCTAGTGAGAGTCCCAATTTTGTGTGGTCTGTAAACAAAGCCA CCCACGTGGTTCCTTCTCCATGGTCATTGTAATAGTTTTCTTCTTCTTAATGGACCCTAC TTGCCCTCCATTGTAGGAGATCCTTTCGAATCTTCTTCTCTTTCATCATCTATTTCTCTT CACATTTCAGCAAAAAAAATCCATTGACACAACATCTTGTACAGTTCAAAAAAGAAGAAA AAAGTGTATAGAAAGTTGTTGTTTTTTTGGTGAGATACAGAATGAGTGCTTTGTATTCCA CTTTTATCTTGATTGATCTTCAAAGTTCTTGGTATTCAGCTAAACAGATACCCAATTCCA CTTTTTGTTATTTAAATAAGTCCACGTTCTCAGCGGCATTTCGTCGAACACGTGGTGGGC GGGGTAGATTTCCGGCGCCGGCGGCGTCGATTCAGTCACCGGGAATCAGGAGACCAAGGG AACGTCCCGTTGCCGGAAATGGGTTGTCGTTGTTTTCTCCTAATTCACCTTCTACTTCGA GTTCTGAGGATGAGGTTGTGTCTGATTTGGACTTGTTCTTGGAGTTAGTGCCACTGAGGA TGAGGAATGAACTATTTATGCATCAGGAGATTGGGAAGTTGGTTGAGATAGTTATGGATT TAGGCAGAAAGCCCCTCGCGCGATTTCCTTCCGGTGATTGGATCATTTCTGAGCAGCCTG TAATGCTTGAGGATCTTCACCATGCCATTTCAAAGGTGGGGGATTTCTCAGATGACAACC GTTCGGGTATTGACAGTTCCCTACATCGTATTAGTGCAATTAGAAACCGTAAAATGCAAA TTATTGGCCTTACCTGCCGGGTTGGTCGAGCTGTATCTGGAAGTGCTGAGATCATACGTG ACTTGGTCGAAGAAGGTGGTTCCATATTGGTGATAGGTCCTCCAGGAGTTGGTAAAACTA CCTTAATCAGAGAAATAGCCAGAATGCTGGCAGATGACCAGAAGAAACGAGTCGTTATTG TTGATACATCTAATGAGATTGGAGGCGATGGAGATGTTCCTCATTCAGGAATTGGTTGTG CAAGAAGGATGCAAGTCCCAAATGTTAACCTGCAGCATAATGTAATGATTGAAGCAGTTG AAAACCATATGCCCCAAACCATCATCATAGATGAAATAGGGACAGAGCTTGAAGCGTTGG CTGCTAGTACAATTGCTCAGAGAGGAGTACAGCTTGTTGGGACTGCTCATGGAAGTACGA TTGAGAGTATAGTAAAAAATCCATCTTTACAGATGCTTGTTGGTGGCATAGAGAGTGTTA CTCTGGGTGATGAGGAAGCAAGGAAAAGGAAAGTACAGAAAACAATTCTCGAGAGGAAAG GTCCTCCAACCTTCACATGTGCTGTTGAGATGATATCAAGAACTCAATGTCGTGTTCACC ATAGACTAGATTTAACAGTAGATGCTTTATTAGCAGGAAAATCTCCTTTGTTTGAGATAC GGGGATTGGATAGTGAAGCCGAAAATTCGATCGAGTCTTCTCCTTTCACTCAAGAGGACG ATGTTAATGACTTTGAGCTAATTGATAAAGTAGAAAAGAAGGATAAAATGGAGTCTGATA GGGAATATATAAAAAAGAAACCTAAAGTGGAGTCTGATATGGAGTATGTAAAAAAGAAAG ACAAAGTGGAGTTTGACATGGAGTATGTAAAAAAGAAAGTTAAACTAGAGTCTGATAGGG AGTATGTAAAAACGAAAGATAAAGTAGAGTATGTAAATTATAGTAAGCAATCCAGTAAAG AAGACAAAAAGGTACAATTTGAATCAGACGAGGAAGATGATGATCATCCCAATTCCAAGA AATCAGGCACCAGTGGATATGCCAGCAAAAAAACCTCTCCTGTGTTTGTTTATACTTATA AGATTCAAGAAGCTGATCTATTGCAAGTTGCAACTGTTATGGGGCTAGAGGAAGAAATTG AAGTAACAGATGATATTGGTATTGCAGATGCTATTTTAGCATCTAGTGCTGAAATGAAGC AGAATCCTTGGATTCGTAGCGTTGCCAAATTTCATCAAGTGCCTGTCTTTGTTGTAAAGT CAAATACCATGGCACAGATGGTGAAGGCTATCCGTATGATTCTTGGAATGGATTCTATTC ACTCAAAACAACCATTGAAAGATTCATCAGATATTGAAATTCAAGATGATGCACCGAAAA GGAGACCTACATTGGAGGAGATCGATGCCTTAGAGGAGGTCCGCCTTGCAATTGAGTACA TCGTCATACCTGGTGGTGAGGCTGTTGAGCTTCTCCCAAGGCGCTCTGAGATAGTTGCCC AACAACTCAAGTTGGTTGAGAGTTATCAGTTGGCTGCAGAAAATTCAGGTACCGAATCAA ACCCGAGACTGCAAATCCTTCCACAGAAACTATACAGGAAGACTTCTGTAAAGACCTTGA GATCCAGTTCAAGTCGGAACAGCACAGGTTCCGACTCATGGATTGGTAAGAACGGAGGCA CTGGTGTTGCTCGACTCCCTTTCTTGCCTGAATAATTCAGATAAGTTCCTTTACCGCTGC TTTAACCTTCGTTGAACATGTTGAAGGCAATGTACAGTGATGTATATCTGTATCTAAACC CCTGTAGATTCCATTGTTTGGTACAATTCTTTTCGTCGCAGTGTTGTCTACTCATGTATT CCTTGCTAAAGGCATTTTCAATACTATGTACAGTGATGTAAATCCTTCAAAGGAATGAAA TTTAGTAGCACTCATTCCATAGAAATAAAACAACATTTGAAGCTAAAAATATGAGTCCCC TTCTTGTATGTGTTCTTGAGCCTGCTCATGAGCTGAGAATTTTTCATGATCATATATATT ATCATAAGTGGGAAGATTCAAAGTGAATAAAAAAAAGATGTGTAATCGCTAAAAACAACA ATATCATAATGTTAGAAAATGAAATTTAATCCGCTTATTATTGTCATT