Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g007990.2.1
CDS Infomation

chloroplast malate dehydrogenase (mdh)
Sequence

ATGGCTGTAGCAGAGTTTATTCCTTCTTCTTCATCATTGACTAAAAAAGCGAGTTTTTAT
TCATCACAACTCTCTAATGTTTCAACTAAGATCTCTCATCAACGTCGATTAAGCTTTAAG
CCTTTATTGAGAACTCATAATCATTCTCAAATATGTTGCTCTGTTACTTCTAAGGAAGCT
CAAGCGACGACTGTAGTGCAGACTGATGATCCAAAGAAGAAATCAGAATGCTATGGAGTT
TTCTGTCTTACTTATGATCTCAAGGCTGAAGAAGAGACGTCTTCGTGGAAGAAAATGATT
ACTGTTTCTGTGTCTGGTGCTGCTGGGATGATTGCTAATCATCTTCTATTCAAACTTGCA
TCTGGTGAGGTTTTTGGGCCAGATCAACCTATTGCACTAAGGCTATTGGGGTCTGAGCGG
TCAATCCAAGCGCTTGAAGGAGTTGCTATGGAACTAGAGGACTCTTTGTATCCTTTGCTT
AGGGAGGTAAATATAGGTATAGATCCCTATGAGGTGTTCCAGGATGCAGAATGGGCACTT
CTCATTGGTGCAAAGCCTCGAGGCCCCGGTATGGAACGAGCTGGCTTATTGGATATAAAC
GGCCAAATCTTTGCTGAACAGGGGAAAGCTCTCAATGCCGTTGCATCGCGAAATGTTAAA
GTGATAGTTGTGGGAAACCCTTGCAATACCAATGCATTGATTTGTTTGAAAAATGCTCCA
AATATACCAGCAAAGAACTTCCACGCCTTGACGAGGTTAGATGAAAATAGAGCCAAATGC
CAGCTAGCTCTAAAAGCTGGAGTCTTTTATGACAAAGTATCTAATGTTACCATTTGGGGC
AATCACTCAACAACTCAGGTTCCAGACTTTTTAAACGCTAAAATTAATGGATTGCCAGTC
AAAGAGGTGATTAAAGACACTAAATGGTTAGAGGAAGAGTTCACTGAAAAAGTCCAAAAG
AGAGGTGGTGTACTTATTCAGAAATGGGGTAGATCTTCAGCTGCATCAACTGCTGTGTCG
ATTGTCGATGCAATAAGGTCTCTTGTCACTCCTACACCTGAAGGAGATTGGTTTTCTACT
GGAGTATATACAAATGGAAATCCTTATGGAATAGCACAGGATATAGTTTTCAGTATGCCT
TGTAGATCAAAAGGAGATGGTGATTATGAACTAGTAAAAGAAGTTATATTTGATGATTAC
CTTTGGAACCGTATAAAAAAGTCAGAAGATGAGTTGCTCGCGGAGAAAAGATGTGTTGCC
CATCTTACAGGAGAGGGTATCGCGGTCTGTGATCTCCCCGGAGATACGATGCTTCCCGGA
GAGATGTGA

Peptide Sequence

PEP ID

Solyc11g007990.2.1
PEP Infomation

chloroplast malate dehydrogenase (mdh)
Sequence

MAVAEFIPSSSSLTKKASFYSSQLSNVSTKISHQRRLSFKPLLRTHNHSQICCSVTSKEA
QATTVVQTDDPKKKSECYGVFCLTYDLKAEEETSSWKKMITVSVSGAAGMIANHLLFKLA
SGEVFGPDQPIALRLLGSERSIQALEGVAMELEDSLYPLLREVNIGIDPYEVFQDAEWAL
LIGAKPRGPGMERAGLLDINGQIFAEQGKALNAVASRNVKVIVVGNPCNTNALICLKNAP
NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKINGLPV
KEVIKDTKWLEEEFTEKVQKRGGVLIQKWGRSSAASTAVSIVDAIRSLVTPTPEGDWFST
GVYTNGNPYGIAQDIVFSMPCRSKGDGDYELVKEVIFDDYLWNRIKKSEDELLAEKRCVA
HLTGEGIAVCDLPGDTMLPGEM*

Transcript Sequence

Transcript ID

Solyc11g007990.2.1
Transcript Infomation

chloroplast malate dehydrogenase (mdh)
Sequence

AAGGTAACTAGATAAGGATATTATTTGACAAGTGTCATAAACTATGGCCTTATACTAATA
TTTCAAAATCAACACTTTCATCCAAAATATTGTCCCTCCAAAACCACAAACTCCATTTTC
ACCTGTTTTCTTCTTCTTTCCTTCAAACTCTTTTTGAAAAAAAAAATCTCATTTTTTTTT
GCTTGTGATTTTTACACTTTTTTAGTTTTTTTTAAAAAAATCTCTGCTGCAATGGCTGTA
GCAGAGTTTATTCCTTCTTCTTCATCATTGACTAAAAAAGCGAGTTTTTATTCATCACAA
CTCTCTAATGTTTCAACTAAGATCTCTCATCAACGTCGATTAAGCTTTAAGCCTTTATTG
AGAACTCATAATCATTCTCAAATATGTTGCTCTGTTACTTCTAAGGAAGCTCAAGCGACG
ACTGTAGTGCAGACTGATGATCCAAAGAAGAAATCAGAATGCTATGGAGTTTTCTGTCTT
ACTTATGATCTCAAGGCTGAAGAAGAGACGTCTTCGTGGAAGAAAATGATTACTGTTTCT
GTGTCTGGTGCTGCTGGGATGATTGCTAATCATCTTCTATTCAAACTTGCATCTGGTGAG
GTTTTTGGGCCAGATCAACCTATTGCACTAAGGCTATTGGGGTCTGAGCGGTCAATCCAA
GCGCTTGAAGGAGTTGCTATGGAACTAGAGGACTCTTTGTATCCTTTGCTTAGGGAGGTA
AATATAGGTATAGATCCCTATGAGGTGTTCCAGGATGCAGAATGGGCACTTCTCATTGGT
GCAAAGCCTCGAGGCCCCGGTATGGAACGAGCTGGCTTATTGGATATAAACGGCCAAATC
TTTGCTGAACAGGGGAAAGCTCTCAATGCCGTTGCATCGCGAAATGTTAAAGTGATAGTT
GTGGGAAACCCTTGCAATACCAATGCATTGATTTGTTTGAAAAATGCTCCAAATATACCA
GCAAAGAACTTCCACGCCTTGACGAGGTTAGATGAAAATAGAGCCAAATGCCAGCTAGCT
CTAAAAGCTGGAGTCTTTTATGACAAAGTATCTAATGTTACCATTTGGGGCAATCACTCA
ACAACTCAGGTTCCAGACTTTTTAAACGCTAAAATTAATGGATTGCCAGTCAAAGAGGTG
ATTAAAGACACTAAATGGTTAGAGGAAGAGTTCACTGAAAAAGTCCAAAAGAGAGGTGGT
GTACTTATTCAGAAATGGGGTAGATCTTCAGCTGCATCAACTGCTGTGTCGATTGTCGAT
GCAATAAGGTCTCTTGTCACTCCTACACCTGAAGGAGATTGGTTTTCTACTGGAGTATAT
ACAAATGGAAATCCTTATGGAATAGCACAGGATATAGTTTTCAGTATGCCTTGTAGATCA
AAAGGAGATGGTGATTATGAACTAGTAAAAGAAGTTATATTTGATGATTACCTTTGGAAC
CGTATAAAAAAGTCAGAAGATGAGTTGCTCGCGGAGAAAAGATGTGTTGCCCATCTTACA
GGAGAGGGTATCGCGGTCTGTGATCTCCCCGGAGATACGATGCTTCCCGGAGAGATGTGA
AACCAGCAAACCATATTGTTACAAATTATGTTTTAAGAACTTGCATAGAATGCAAGTGTT
TGTTTGTAATTTGTGTATCATTGATAAATCAGTCTCAACAAGGGAGATAATAAATGAGAC
ACAGTATCAACATTATTCTAATCGAGTCGATTCCATGATTATAATTTCATTCCGTACTAG
AGTGAACCCCACATATGGTTACTAGCTTTGGGTACGCGCGTTGTACGTATATCCGTATTA
GTTGGTATCAAAGTTTTCTATACAATTTCAACTTATATATTAAAAATAGATACTAAAGTG
TATCGAAAATACAAGTTTCTAAAGATAAATGAGTATTCATAATAGATTTAATATTTGCAA
AGTTGAAATATAAA