Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g007940.2.1
CDS Infomation	RNA-binding protein Nova-1 (AHRD V3.3 *** A0A151T0U1_CAJCA)
Sequence	ATGGCAATGGAAGGAGGAGCTGAATCGAACTACAATTCATCTACTGAAAGTCAGCTTGAG CAATCTTCTCCTCGCAAATCTCCGCCTCCTCTTCCTTCTCAAGACCATGAGGAGAAGGCA ACTTATGTCAAATTCCTTCTGTCAAATGCTGAAGCTGGTTCAATTATTGGAAAAGGTGGT TCAACAATCACTGAGTTTCAGTCTCGTTCTGGGGCTAGAATTCAGTTGTCGCGCAACTAT GAAGTTTTCCCTGGAACACCAGATAGAATTGTAATGGTATCTGGGTTTCTTGATGACATA CTCAAGGCAGTCGATCTTATTCTTGGTAAATTGATGGATGAGTTTTATGCTGAAGATGGT GGCGATGTGGATCCACGCTCAAAATTTAGATTAGTTGTGCCCAACAGCTCTTGTGGTGGA ATAATTGGGAAAGGAGGAGCCACAATAAAGTCATTTATTGAAGATTCTCGGGCTGGCATA AAAATATCTCCACAGGATTACAACTTCCCTGGACTGCATGATAGGATAGTTACAGTGACT GGTACACTAGAAGAGCAGATGCGGGCAATTGAATTGATTTTATTCAAGTTAGCTGACGAC CCGTATTACATGCAGTCCATGAATGCACCATTCCAGTATGCTGCTGTATATGTCGGAATG AACTATGGATATGGACCACCAAACAGAGTTGGAGGAAGATATCCGAATAACCGACAGCAG AACAAGGTGGCACCACTGGAAGTCAGGGACAATTCGATGACTATTGGTGTTGCAGATGAG CATGTTGGACTAGTCCTTGGCCGTAATGGGAGGAGCATAATAGAGATCAGTCAGCTTAGT GGTGCCAGAATAAAGATATCAGATAGGGGTGATTTCTTGTCTGGTACTTCCGACAGGAAG GTAACTATAACTGGATCACAAAGAGCAATCCGCACTGCAGAGTCCATGATATCTCGGAAA GTAGCTACTATTTCTGTGAGAGAATGA

Peptide Sequence

PEP ID	Solyc11g007940.2.1
PEP Infomation	RNA-binding protein Nova-1 (AHRD V3.3 *** A0A151T0U1_CAJCA)
Sequence	MAMEGGAESNYNSSTESQLEQSSPRKSPPPLPSQDHEEKATYVKFLLSNAEAGSIIGKGG STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG GDVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVT GTLEEQMRAIELILFKLADDPYYMQSMNAPFQYAAVYVGMNYGYGPPNRVGGRYPNNRQQ NKVAPLEVRDNSMTIGVADEHVGLVLGRNGRSIIEISQLSGARIKISDRGDFLSGTSDRK VTITGSQRAIRTAESMISRKVATISVRE*

Transcript Sequence

Transcript ID	Solyc11g007940.2.1
Transcript Infomation	RNA-binding protein Nova-1 (AHRD V3.3 *** A0A151T0U1_CAJCA)
Sequence	CTCTCTCTGCAAAATGCAATTGCTTTGACTCGGTTTCGATTTCTCTCTCTACACATCTCT ATTCGCTCTGCAAAAACATTGATTAATACGCACCGGAAATGGCAATGGAAGGAGGAGCTG AATCGAACTACAATTCATCTACTGAAAGTCAGCTTGAGCAATCTTCTCCTCGCAAATCTC CGCCTCCTCTTCCTTCTCAAGACCATGAGGAGAAGGCAACTTATGTCAAATTCCTTCTGT CAAATGCTGAAGCTGGTTCAATTATTGGAAAAGGTGGTTCAACAATCACTGAGTTTCAGT CTCGTTCTGGGGCTAGAATTCAGTTGTCGCGCAACTATGAAGTTTTCCCTGGAACACCAG ATAGAATTGTAATGGTATCTGGGTTTCTTGATGACATACTCAAGGCAGTCGATCTTATTC TTGGTAAATTGATGGATGAGTTTTATGCTGAAGATGGTGGCGATGTGGATCCACGCTCAA AATTTAGATTAGTTGTGCCCAACAGCTCTTGTGGTGGAATAATTGGGAAAGGAGGAGCCA CAATAAAGTCATTTATTGAAGATTCTCGGGCTGGCATAAAAATATCTCCACAGGATTACA ACTTCCCTGGACTGCATGATAGGATAGTTACAGTGACTGGTACACTAGAAGAGCAGATGC GGGCAATTGAATTGATTTTATTCAAGTTAGCTGACGACCCGTATTACATGCAGTCCATGA ATGCACCATTCCAGTATGCTGCTGTATATGTCGGAATGAACTATGGATATGGACCACCAA ACAGAGTTGGAGGAAGATATCCGAATAACCGACAGCAGAACAAGGTGGCACCACTGGAAG TCAGGGACAATTCGATGACTATTGGTGTTGCAGATGAGCATGTTGGACTAGTCCTTGGCC GTAATGGGAGGAGCATAATAGAGATCAGTCAGCTTAGTGGTGCCAGAATAAAGATATCAG ATAGGGGTGATTTCTTGTCTGGTACTTCCGACAGGAAGGTAACTATAACTGGATCACAAA GAGCAATCCGCACTGCAGAGTCCATGATATCTCGGAAAGTAGCTACTATTTCTGTGAGAG AATGAATTTGTGAAATGCTGATATCCATGGCTGGAGAACACATTCCATCTGAGAAGGGGC AGCATATCTTAAGTACATTTAAGGAATATTTCGAAGCAAAGCTATAGTTTTCGCAATTGA TTCAGTTGACTGAATATATACCGTTCTATACAGTCGTAATTATTCAATAGCTAACACTCA GTTGACAACTTTGAAGTTCTCTTATGGTCTGTTACATACAAAATATTTATTCCTTCCTTA CTGAAAGAGCTTATACGGTACGATGAGATGATTCATCTTAGTCTTAGTATGTCAGGTACG TCCTTGGCCAAGCTCAGGGATTGACAAATCTATAGGGCGAGCTATGGACTCATACTACTA CTTGGTAAGTTACTAGTATATCATATATTAAAAATTTGATTACATACACAAACAAAGCAA AGTTTACCACCACATGAATAAAGGTGGTTAAACCATGCAATTTATTCCATATCATATAAA TAATACAAACACCAAATATATCGAATTTATGTATACATGGACTTCATTTCAATAGTTCAA GGTTCATCACCTCCATTTCCTCCACCATATCCTGATCCATAACCTGAGCCACTACCATAC CCTGAACCATTGCCATTTCCTCCACCGCCGCCTCCACCACCACCACCTCCACCACCACCG CCTCCGCCACCTCCTCCTGATCTTCCACCACCACTTCCATACCCGGAGCCACTTCCACTT CCATAACCCGAACCATATCCTGAACCATTATTTCCATTGCCGCCACCACCACCACCACCT CCACCATGACCACCACCCCCTCCGCCACCTCCACCCTTACCTACTCCTTCACCTGACCCG TACCCTGATCCATATCCTGACCCATATCCAGAACCACTCCCCCTCCCTGAATTTCCTCCT CCTCCACCACCTCCACTACCACCTCCTCCTCCACCTCCTCCGCCTCGTCCAAACACTCCA TCACCCCCACCATATCCTGAGCCTTCCCCGGAACCATACCCCGAACCATATCCTGAACCC GACCAACCTAACCCTCCACCACCACCACCACCACCACCTCTTCCTCCACCTCCTCCACCA CCACCGTTTACCGTCTTACCTAATCTTGCACAAAAGGCAAGATCAACAAAGAGTAAAATC AACAATGCAGCTGCTATAAGCTTGGAATGAGCCATGCGATAGTTATGTATTAACTTCCTT ATTATCTCTATGCAATTTTTTTTAATATGAAATTTGTTAAGTAGCAGTGTAGCACTTAGC TTTAGGAGAAAATGAAATGAAATGCTAAGTATGGAAGT