Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g007910.2.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061FPQ4_THECC)
Sequence	ATGGAAGATGTTCAGCAGCAAATGCAGCAGAAGCCGGAGAGTACGGGGGATGATGTGCGT TCGGAGTTTGAGAGGGGACTGGAGGAGTTGATGTGTGGTCACTTGGATGAGTGTATGTCG TATGCTTCGTGTAGTTCAGTGCGTAATACTGAGGATGAGGATGAAGAGTCTGATCAGCTT GTAAGGAGGAGGAGGAGGTCTGACCTTGAAGGTGATGACCTGGCAGAGTCATCTGCTGCC AGGAGGCGCCACTCAAGGATATTGAGCAGGTGGGCAGCAAGACAGGCTCAGGAGATGATT ACTACTATTGAGAGGAGGAACCGTGAGTCTGAGCTGATGGCACTTGCTGGTTTACACACT GTTTCAATGCTTGATTCCTCGTTCTTGAGGGAATCACAATCTCCTACCTCAAGGCGTCAG GGTGGTGATTCTGAGAGAATAAACACGAGGGCTTCTAATATTTTGCAGATGTGGCGAGAA TTGGAGGATGAGCATGTGTTGAATCGTGCACGAGAAAGGGTGAGGGAAAGGTTGACACAA CGGAGGAGCATGGATTCTAATACTAATGTTTCTAGTGCTAATATGTCGGAAAGCCGGGAA ACTGATAACCAAGGTAGCTTGGTGGATGCTAGTGAGAGTGAGAATGAGTATGGTACTTGG TCTCATGATCCAATTGGACCACAGAATGATCATAGAGACCATGAGAACTCCAGCCGTGAA CCATCTCCTGATCTAGGGGAAGTTGAGAGGGAGAGGGTGAGGCAAATTGTTCGTGGATGG ATGGAGAGTGGGATCAGTGACCATTCATCTAATGTCTCTCAGCCTCAGAGGAATGGTGGT CCAAGAGGGGAATGGCTGGGGGAGACAGAACGTGAAAGGGTGAGAATTGTGCGGGAATGG GTTCAAATGACTAGTCAACAGAGAGGAGCTCGTGGTAGCCAGAGGGAGGAACAGTCCACT AGGCTTAGTTCTCAAGGAGATCGTGCTCGTGAAGGGTCTGTTGTGGACCATGAGGAAGCC CAACCAGAGCACATTCGTAGGGATATGTTGAGGTTGCGTGGGAGGCAGGCTCTACTTGAT TTGCTTATGAGAATTGAAAGGGAAAGGCAGAGGGAACTTCAGGGTCTGCTGGAGCATCGT GCAGTATCTGATTTTGCCCATCGCAATCGGATTCAGTCACTTCTCAGAGGAAGATTTTTG CATGAAAGGCCTGCTGAGGAAGAGAGACCACCTTCAATAGCAGCAAGTGAACTAGTTCAG CTAAGACAACGTAACACCGTCTCAGGGCTGAGGGAAGGATTCCGCTCCAGATTAGAAAAC ATTGTGCGTGGTCAAGAAGTCGAGGACGAAAATGGTGAACAAATGCAGACCAGCGAGCTG GAGAGCACTGTGCATCAGTTGCCTGATCGCAGTGAGAATTCTGGTCAGAGTATGAATCAA CAACCTCCTCCTAATCAAGGAAGGGATCGAGTGGAAGCTGTTGTTGAAGCTGAGGAAGCA ATACAACAACGTAATTTAACATCAAATGATTCTAATGTATGGACTGATGAGACCACAGAG AATGTAAGCAGGAATTGGCAAGAAAATCCATCAACTGGTAGGTCCCTTGAAACAACAGCA TATGTGGGGAGAGCAGAACATCGTTTCCCAGAAAACCAGGAGGTTTGGCATGAGGATGCC TCACGAGAAGCTGTGGAGTCTTGGTCAGCAGGACCTTCTGATCCTCCACGAATGCGGCGT CCTGTCCCGATAAGGAGAGTTAGTAGATTCCACCCACCTGATGATGATAATGTGTACAGT ATGGAACTTAGAGAGCTTCTTAGCAGGAGGAGTGTTTCCAACCTTCTTCGCAGTGGTTTC CGTGAAAGTTTAGATCAATTAATTCAGTCATATGTGGAAAGGCAAGGGCGCTCTCCTATT GATTGGGATCTGCATCGGAACTTGCCTATTCCTGTTTCACCTGAAATGGGTCCAGACCAG CATAATGATGACCAAAATGATGATCAGCAGGATGGAGTTGGGCGGCCTTCAATTGTACTA CCCTCTCCTCCTGTGCCACCACCCCAGCCACTTTGGCATCAGGATTTGCATCACTCAAGT TGGCCACGTCACGCAGTGCATCGTTCTGAACTTGAGTGGGAAATGATTAATGAACTTAGA GCAGACATGGCAAGACTGCAGCAAGGCATGAACCACATGCAAAGAATGTTAGAATCCTGC ATGGATATGCAACTGGAGCTACAACGCTCTGTCAGGCAGGAAGTTTCAGCTGCTTTGAAT CGATCAGCTGGTGGTCAAGGGGCTGCAGAGACCTCAGTCGATGGTTCTAAGTGGGGCAAC GTGAAAAAGGGTACTTGCTGTGTTTGTTGTGATAGTCACATCGACTCCTTGTTGTACAGA TGTGGGCACATGTGCACTTGTTCAAAATGTGCAAATGAATTGGTGAGAGGCGGAGGGAAG TGTCCGTTGTGTCGCGCACCCATTGTTGAGGTGATACGAGCTTACTCAATACTGTAA

Peptide Sequence

PEP ID	Solyc11g007910.2.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061FPQ4_THECC)
Sequence	MEDVQQQMQQKPESTGDDVRSEFERGLEELMCGHLDECMSYASCSSVRNTEDEDEESDQL VRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHT VSMLDSSFLRESQSPTSRRQGGDSERINTRASNILQMWRELEDEHVLNRARERVRERLTQ RRSMDSNTNVSSANMSESRETDNQGSLVDASESENEYGTWSHDPIGPQNDHRDHENSSRE PSPDLGEVERERVRQIVRGWMESGISDHSSNVSQPQRNGGPRGEWLGETERERVRIVREW VQMTSQQRGARGSQREEQSTRLSSQGDRAREGSVVDHEEAQPEHIRRDMLRLRGRQALLD LLMRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLHERPAEEERPPSIAASELVQ LRQRNTVSGLREGFRSRLENIVRGQEVEDENGEQMQTSELESTVHQLPDRSENSGQSMNQ QPPPNQGRDRVEAVVEAEEAIQQRNLTSNDSNVWTDETTENVSRNWQENPSTGRSLETTA YVGRAEHRFPENQEVWHEDASREAVESWSAGPSDPPRMRRPVPIRRVSRFHPPDDDNVYS MELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRSPIDWDLHRNLPIPVSPEMGPDQ HNDDQNDDQQDGVGRPSIVLPSPPVPPPQPLWHQDLHHSSWPRHAVHRSELEWEMINELR ADMARLQQGMNHMQRMLESCMDMQLELQRSVRQEVSAALNRSAGGQGAAETSVDGSKWGN VKKGTCCVCCDSHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVIRAYSIL*

Transcript Sequence

Transcript ID	Solyc11g007910.2.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 *** A0A061FPQ4_THECC)
Sequence	CTTCATTACTCTTTTCTCTCTCTTTTTCCATCTTAATAAATTCATAGCTTTTCTCTTCCC CAAATTCTCTCTCTCTTCATTTCCAATCGATTTTTTTTCCTATTTATGCTTTCTCTCTCT AAATTCACATACTCATATATATGATAACAATTTATAATTTAGGGTTTTGATTCTCACACT TGATGCATAGAGGAACAGCGATTCTCAGGTTGTGATATGTATTTAATCAGTGATTTGGTT GTATTGAAAAAGGAGTGTAATTTGAGGAGATTTGTTATGGAATTGAGTTTAGGGCTAGTT TTGTTTGTTAATGGAGGTGAAATTGTGGGAGATAATGGTGTGATGTTTTGCATTTAGGAA TTGGATAGTTTTTTTGTGGGGAAATGTGTTAAGGGTGTTAAGGTTGGGATAAAGTGGGAT TTGAAGATGGAAGATGTTCAGCAGCAAATGCAGCAGAAGCCGGAGAGTACGGGGGATGAT GTGCGTTCGGAGTTTGAGAGGGGACTGGAGGAGTTGATGTGTGGTCACTTGGATGAGTGT ATGTCGTATGCTTCGTGTAGTTCAGTGCGTAATACTGAGGATGAGGATGAAGAGTCTGAT CAGCTTGTAAGGAGGAGGAGGAGGTCTGACCTTGAAGGTGATGACCTGGCAGAGTCATCT GCTGCCAGGAGGCGCCACTCAAGGATATTGAGCAGGTGGGCAGCAAGACAGGCTCAGGAG ATGATTACTACTATTGAGAGGAGGAACCGTGAGTCTGAGCTGATGGCACTTGCTGGTTTA CACACTGTTTCAATGCTTGATTCCTCGTTCTTGAGGGAATCACAATCTCCTACCTCAAGG CGTCAGGGTGGTGATTCTGAGAGAATAAACACGAGGGCTTCTAATATTTTGCAGATGTGG CGAGAATTGGAGGATGAGCATGTGTTGAATCGTGCACGAGAAAGGGTGAGGGAAAGGTTG ACACAACGGAGGAGCATGGATTCTAATACTAATGTTTCTAGTGCTAATATGTCGGAAAGC CGGGAAACTGATAACCAAGGTAGCTTGGTGGATGCTAGTGAGAGTGAGAATGAGTATGGT ACTTGGTCTCATGATCCAATTGGACCACAGAATGATCATAGAGACCATGAGAACTCCAGC CGTGAACCATCTCCTGATCTAGGGGAAGTTGAGAGGGAGAGGGTGAGGCAAATTGTTCGT GGATGGATGGAGAGTGGGATCAGTGACCATTCATCTAATGTCTCTCAGCCTCAGAGGAAT GGTGGTCCAAGAGGGGAATGGCTGGGGGAGACAGAACGTGAAAGGGTGAGAATTGTGCGG GAATGGGTTCAAATGACTAGTCAACAGAGAGGAGCTCGTGGTAGCCAGAGGGAGGAACAG TCCACTAGGCTTAGTTCTCAAGGAGATCGTGCTCGTGAAGGGTCTGTTGTGGACCATGAG GAAGCCCAACCAGAGCACATTCGTAGGGATATGTTGAGGTTGCGTGGGAGGCAGGCTCTA CTTGATTTGCTTATGAGAATTGAAAGGGAAAGGCAGAGGGAACTTCAGGGTCTGCTGGAG CATCGTGCAGTATCTGATTTTGCCCATCGCAATCGGATTCAGTCACTTCTCAGAGGAAGA TTTTTGCATGAAAGGCCTGCTGAGGAAGAGAGACCACCTTCAATAGCAGCAAGTGAACTA GTTCAGCTAAGACAACGTAACACCGTCTCAGGGCTGAGGGAAGGATTCCGCTCCAGATTA GAAAACATTGTGCGTGGTCAAGAAGTCGAGGACGAAAATGGTGAACAAATGCAGACCAGC GAGCTGGAGAGCACTGTGCATCAGTTGCCTGATCGCAGTGAGAATTCTGGTCAGAGTATG AATCAACAACCTCCTCCTAATCAAGGAAGGGATCGAGTGGAAGCTGTTGTTGAAGCTGAG GAAGCAATACAACAACGTAATTTAACATCAAATGATTCTAATGTATGGACTGATGAGACC ACAGAGAATGTAAGCAGGAATTGGCAAGAAAATCCATCAACTGGTAGGTCCCTTGAAACA ACAGCATATGTGGGGAGAGCAGAACATCGTTTCCCAGAAAACCAGGAGGTTTGGCATGAG GATGCCTCACGAGAAGCTGTGGAGTCTTGGTCAGCAGGACCTTCTGATCCTCCACGAATG CGGCGTCCTGTCCCGATAAGGAGAGTTAGTAGATTCCACCCACCTGATGATGATAATGTG TACAGTATGGAACTTAGAGAGCTTCTTAGCAGGAGGAGTGTTTCCAACCTTCTTCGCAGT GGTTTCCGTGAAAGTTTAGATCAATTAATTCAGTCATATGTGGAAAGGCAAGGGCGCTCT CCTATTGATTGGGATCTGCATCGGAACTTGCCTATTCCTGTTTCACCTGAAATGGGTCCA GACCAGCATAATGATGACCAAAATGATGATCAGCAGGATGGAGTTGGGCGGCCTTCAATT GTACTACCCTCTCCTCCTGTGCCACCACCCCAGCCACTTTGGCATCAGGATTTGCATCAC TCAAGTTGGCCACGTCACGCAGTGCATCGTTCTGAACTTGAGTGGGAAATGATTAATGAA CTTAGAGCAGACATGGCAAGACTGCAGCAAGGCATGAACCACATGCAAAGAATGTTAGAA TCCTGCATGGATATGCAACTGGAGCTACAACGCTCTGTCAGGCAGGAAGTTTCAGCTGCT TTGAATCGATCAGCTGGTGGTCAAGGGGCTGCAGAGACCTCAGTCGATGGTTCTAAGTGG GGCAACGTGAAAAAGGGTACTTGCTGTGTTTGTTGTGATAGTCACATCGACTCCTTGTTG TACAGATGTGGGCACATGTGCACTTGTTCAAAATGTGCAAATGAATTGGTGAGAGGCGGA GGGAAGTGTCCGTTGTGTCGCGCACCCATTGTTGAGGTGATACGAGCTTACTCAATACTG TAAAAAAAAGAAAAAAGTCGAAAGGGATAGGAGGGTGAAGAGAGAAGGTTGGTAAGGTAG GTGTAAGAGGAGTTGTAATGCTCCCTCTACCAAGCTTCTGTTATTCTGTAGAGTGTTTAT TTACTTTTGCCTATCTTCTTCTAATTATATATTATGGAATGCTATGCAAATGTGTAATTG GAAAAACGAAAGGCACTTTTTTTGCATCATTCATTCGTAAATAAAATTCTTTTTTATTTA CCATTGCTTTAGAAGAAAGAGGAATGCTCTACCGTCATTTCATGGGGATAATTTTATTAC AA