Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g007830.2.1
CDS Infomation

protein tyrosine phosphatase
Sequence

ATGAATTGCCTTCAGAATCTTCCCAGATCCTCTGGTTTACCACTGAGAAGTTTCACAGGC
AACTCAAGAAAGCTTTATTCCACTGTTGTTTCACTGGGGATGACAAAATTTGCTGATCAG
CGTCTAAGTATTGTGGCACAGGTTGTATCTGGTCCAGAATCTACTACAGAGAAGGATGAG
GAAAAATCCGATACATACAGTCATGACATGACTGCAGCTATGGGAGCTGTCTTGACTTAT
AGGCATGAGTTAGGAATGAACTACAACTTCATCCGTCCAGATTTGATTGTTGGGTCATGT
CTACAGACTCCTGAGGACGTGGACAAGCTTCGGAGCATTGGAGTAAAAACTATATTTTGC
TTGCAACAAAATCCAGATCTTGAATACTTTGGGGTTGATATCAATGCTATTCGTGAATAC
GCCAACAAATGTGGTGCTATTGAACACTTGCGTGCCGAAATAAGGGATTTTGATGCATTT
GATTTGAGGTTGCGGCTTCCAGCTGTAATAAGCATATTGAACAAAGCCATCAATAGAAAT
GGAGGTGTGACTTACATACACTGCACAGCTGGACTTGGCAGAGCTCCCGCAGTTGCGTTG
ACGTATATGTTCTGGGTTCAAGGCTATAAGCTTAGTGAAGCTTTCGATTTACTCATGAGC
AAACGCTCCTGTTTTCCGAAACTAGATGCCATCAAAAGTGCCACAGCAGACATTCTTACA
GGCCTTAAAAAAATGCCCGTAACGTTAACATGGCATGGTGATAATTGTACTACAGTGGAA
ATATCTGGACTTGATATTGGTTGGGGTCAGAGAATACCTTTAAAGTTTGACGAGGAACGA
GGTTTGTGGACTCTCCAGAAGGATTTGCATGAAGGAAAATATGAATACAAGTACATTGTA
GACGGTGAATGGATATGCAACGAGTTTGAGCCGATCACTTCTCCCAACAAAGATGGACAT
GTCAACAACTATGTAGAGGTTCTTGACGAAAATCCAGACAACATCACTAGTGCAGCAGTA
CGAAAGAGGCTCACCGGTGATGACCCTGATCTTACCTCAGATGAAAGGCTCATAATTGAA
CGATTTCTTGAAGCTCATGCAGACGTAGAATGA

Peptide Sequence

PEP ID

Solyc11g007830.2.1
PEP Infomation

protein tyrosine phosphatase
Sequence

MNCLQNLPRSSGLPLRSFTGNSRKLYSTVVSLGMTKFADQRLSIVAQVVSGPESTTEKDE
EKSDTYSHDMTAAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVKTIFC
LQQNPDLEYFGVDINAIREYANKCGAIEHLRAEIRDFDAFDLRLRLPAVISILNKAINRN
GGVTYIHCTAGLGRAPAVALTYMFWVQGYKLSEAFDLLMSKRSCFPKLDAIKSATADILT
GLKKMPVTLTWHGDNCTTVEISGLDIGWGQRIPLKFDEERGLWTLQKDLHEGKYEYKYIV
DGEWICNEFEPITSPNKDGHVNNYVEVLDENPDNITSAAVRKRLTGDDPDLTSDERLIIE
RFLEAHADVE*

Transcript Sequence

Transcript ID

Solyc11g007830.2.1
Transcript Infomation

protein tyrosine phosphatase
Sequence

ATATAATAATAAAGTATAATACAGTGAACTGATAAATTAATAAAAGGGATAAAAAATTGT
TCATATCAGATTCACATTCTTCTTTTAACTCTGCTTCAAATCTATTGATTTTTCCAATGA
ATTGCCTTCAGAATCTTCCCAGATCCTCTGGTTTACCACTGAGAAGTTTCACAGGCAACT
CAAGAAAGCTTTATTCCACTGTTGTTTCACTGGGGATGACAAAATTTGCTGATCAGCGTC
TAAGTATTGTGGCACAGGTTGTATCTGGTCCAGAATCTACTACAGAGAAGGATGAGGAAA
AATCCGATACATACAGTCATGACATGACTGCAGCTATGGGAGCTGTCTTGACTTATAGGC
ATGAGTTAGGAATGAACTACAACTTCATCCGTCCAGATTTGATTGTTGGGTCATGTCTAC
AGACTCCTGAGGACGTGGACAAGCTTCGGAGCATTGGAGTAAAAACTATATTTTGCTTGC
AACAAAATCCAGATCTTGAATACTTTGGGGTTGATATCAATGCTATTCGTGAATACGCCA
ACAAATGTGGTGCTATTGAACACTTGCGTGCCGAAATAAGGGATTTTGATGCATTTGATT
TGAGGTTGCGGCTTCCAGCTGTAATAAGCATATTGAACAAAGCCATCAATAGAAATGGAG
GTGTGACTTACATACACTGCACAGCTGGACTTGGCAGAGCTCCCGCAGTTGCGTTGACGT
ATATGTTCTGGGTTCAAGGCTATAAGCTTAGTGAAGCTTTCGATTTACTCATGAGCAAAC
GCTCCTGTTTTCCGAAACTAGATGCCATCAAAAGTGCCACAGCAGACATTCTTACAGGCC
TTAAAAAAATGCCCGTAACGTTAACATGGCATGGTGATAATTGTACTACAGTGGAAATAT
CTGGACTTGATATTGGTTGGGGTCAGAGAATACCTTTAAAGTTTGACGAGGAACGAGGTT
TGTGGACTCTCCAGAAGGATTTGCATGAAGGAAAATATGAATACAAGTACATTGTAGACG
GTGAATGGATATGCAACGAGTTTGAGCCGATCACTTCTCCCAACAAAGATGGACATGTCA
ACAACTATGTAGAGGTTCTTGACGAAAATCCAGACAACATCACTAGTGCAGCAGTACGAA
AGAGGCTCACCGGTGATGACCCTGATCTTACCTCAGATGAAAGGCTCATAATTGAACGAT
TTCTTGAAGCTCATGCAGACGTAGAATGAAGGAATACTTATTACTTACTAGATACACTTA
ATAATTGTAAGCAAAGTCAATATCTGCTATATAACTCATCCAGTTGTAATTAGTATGCAG
TTTTACTTGAATGAACACTAGTTATATCATATATGTTGTAGTGAAGTAATAACATCCTTA
ATCTTCTTTTTTTTTTTGTCTTTTGGTTTCTACTTCTGATTAAATTCGAATTCGCGTGTG
AAAAAGTTGCACACTTTCCAT