Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g007760.2.1
CDS Infomation

3-phosphoinositide-dependent protein kinase-1
Sequence

ATGTTGGCATTGGTAGGGGGAGAAGGTGATATGGAGCAAGAATTTGATGCAAAGCTAAAG
ATTCAGAACAATTCAGCTAATACTCAGAGATCTAAGAGCTTTGCATTTAGGGCACCACAA
GAGAATTTTACAATTCAAGATTTTGAATTGGGGAAGATCTATGGAGTTGGTTCTTATTCC
AAGGTTGTCAGAGCGAAAAAGAAAGATACTGCGAATGTTTATGCCTTGAAGATCATGGAC
AAGAAGTTCATCACTAAGGAAAATAAGACTGCTTATGTGAAACTAGAGCGTATTGTACTT
GATCAGTTAGATCATCCCGGTGTTGTCCGACTATTTTTCACCTTTCAAGACACTTTTTCA
CTGTACATGGCACTTGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAAATAACAAGGAAA
GGCCGTTTGTCTGAAGATGAGGCACGCTTTTATGCAGCTGAAGTTGTAGACGCTCTTGAA
TATATACATAGTATGGGATTGATTCATCGAGACATTAAGCCAGAGAACCTGCTTCTTACT
TCAGATGGACATATTAAAATTGCAGACTTTGGCAGTGTAAAGCCAATGCAGGATAGCAGA
ATAACAGTCCTTCCAAATGCTGCATCAGATGACAAAGCCTGTACTTTTGTGGGAACAGCC
GCTTATGTACCTCCTGAAGTTTTAAATTCTTCTCCTGCGACTTTTGGAAATGATCTTTGG
GCACTTGGCTGCACATTGTATCAAATGCTTTCAGGAACTTCTCCGTTTAAAGATGCCAGT
GAATGGCTCATCTTCCAGAGAATCATTGCCAGAGATATTAGATTCCCAAATTATTTTTCA
AATGAAGCCAGAGATATTATTGATCAGCTGCTGGATGTTGATCCTAGCAGAAGACCTGGT
GCTGGACCTGATGGTTATGCTTCCTTGAAAAATCATCCTTTCTTTAGTGGGATCGATTGG
GAGAATTTGAGGTTGCAGACCCCTCCAAGGCTTGCCATGGAGCCAAAAGCCCCGTCAACT
CATAGCAGTGGTGATGAGCAAGATCCTTCATGGAATCCATCACACATTGGAGATGGTTCA
GTTAGACCTAACGATGGAAACGGTGCTGCTGCATCAGTTTCTGAAGCTGGTAACAGTATC
ACCAGGCTCGCATCTATCGACTCCTTTGACTCAAAATGGAAGCAATTTTTAGATCCTGGT
GAATCCGTGCTCATGATCTCGATGGTGAAAAAGTTGCAGAAACTCACAAGCAAGAAAGTT
CAGCTAATCCTAACAAATAAACCAAAGTTGATTTACGTAGATCCCTCAAAGTTGGTGATC
AAAGGGAACATTATATGGTCCGACAATCCTAACGATCTTAGCATTCAAGTCACAAGCCCT
TCACAGTTCAAGATTTGTACACCAAAGAAAGTTATGTCATTCGAGGATGCCAAAAACCGA
GCACAACAGTGGAAAAAGGCGATTGAAGCTCTCCAGAACCGGTGA

Peptide Sequence

PEP ID

Solyc11g007760.2.1
PEP Infomation

3-phosphoinositide-dependent protein kinase-1
Sequence

MLALVGGEGDMEQEFDAKLKIQNNSANTQRSKSFAFRAPQENFTIQDFELGKIYGVGSYS
KVVRAKKKDTANVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS
LYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSMGLIHRDIKPENLLLT
SDGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLW
ALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPNYFSNEARDIIDQLLDVDPSRRPG
AGPDGYASLKNHPFFSGIDWENLRLQTPPRLAMEPKAPSTHSSGDEQDPSWNPSHIGDGS
VRPNDGNGAAASVSEAGNSITRLASIDSFDSKWKQFLDPGESVLMISMVKKLQKLTSKKV
QLILTNKPKLIYVDPSKLVIKGNIIWSDNPNDLSIQVTSPSQFKICTPKKVMSFEDAKNR
AQQWKKAIEALQNR*

Transcript Sequence

Transcript ID

Solyc11g007760.2.1
Transcript Infomation

3-phosphoinositide-dependent protein kinase-1
Sequence

TATATTTAAAACCTCGAAAAAATCAACTTCATCCACTACGTCATGTTCGAGCTATAGACT
ACAACTTTCTGATCTTCCAAGAAGGGATTTTGTACTTGCAAATACAAACAAAGGTGTCAA
GATTGTAAAAATCCCAAAAACAAGAAAAGAACCCCATAAACATTCAGAGTAACTGGTAAA
CCAATGCCAATGGCAGCATACAATGTAACTAACTACTACTGATGCCATTTTTGAAGGCCT
CCCAATCATAGGAACCAACATCATCCTCTACCCCTTACCCTACATTTTTGGTCCTATACA
ATAAAAAAATCATTTTTTTATACAAAAAAAAGAGAAGGGGGTGTTCTATGTACTTATGTA
CACACAGAAAGAGAGAAAAAAAAGGAATTTTTTCTATCAAGAATTGGATTTTGTAATGAA
ATGAAATGATATCCATCATTCATTTTCATGTGCACTTCTTCTCTTCAATCCCCAAATAAA
CATATTGTGTTATTCATTCATCTTTTCTTATTGAAATCTTTATTATTATTACCTTAGCTT
TCTAGGGTTTAGAGAAAAGGGGAGAAAGAAACTTAAAGCTCTCACCTTTATACATATTTA
TAAAAATATATACATAATGGTGTCTCTCCTTTTCTAATTTTAGTTTTAGTTTTTTTTTTT
TTTGCATGTATAAGGAATCATTTGCTTTTGGGTGTCTTTGACATATGGAATTGCTTTATC
AGAACAAAGAAAAAGAAAGAAAGAGAGAATATATAAAGAGGATATGAGCTGATGTTTAAT
GGGTTCTTTATGTTACTGCTGTTGTTCAATGGTGTTGCTTTCACTCCTTTCATAGTTTGT
TGTGAAAAAAATCCAATCTTTTTGAAGATATAGGAAGAATATAAGTGTATTGATTGAAAG
GGGTTTGTGGGGGTGCTGAAAGATTAGGTTTTTTTCTTGTTTGAGGGTGAAATGTTGGCA
TTGGTAGGGGGAGAAGGTGATATGGAGCAAGAATTTGATGCAAAGCTAAAGATTCAGAAC
AATTCAGCTAATACTCAGAGATCTAAGAGCTTTGCATTTAGGGCACCACAAGAGAATTTT
ACAATTCAAGATTTTGAATTGGGGAAGATCTATGGAGTTGGTTCTTATTCCAAGGTTGTC
AGAGCGAAAAAGAAAGATACTGCGAATGTTTATGCCTTGAAGATCATGGACAAGAAGTTC
ATCACTAAGGAAAATAAGACTGCTTATGTGAAACTAGAGCGTATTGTACTTGATCAGTTA
GATCATCCCGGTGTTGTCCGACTATTTTTCACCTTTCAAGACACTTTTTCACTGTACATG
GCACTTGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAAATAACAAGGAAAGGCCGTTTG
TCTGAAGATGAGGCACGCTTTTATGCAGCTGAAGTTGTAGACGCTCTTGAATATATACAT
AGTATGGGATTGATTCATCGAGACATTAAGCCAGAGAACCTGCTTCTTACTTCAGATGGA
CATATTAAAATTGCAGACTTTGGCAGTGTAAAGCCAATGCAGGATAGCAGAATAACAGTC
CTTCCAAATGCTGCATCAGATGACAAAGCCTGTACTTTTGTGGGAACAGCCGCTTATGTA
CCTCCTGAAGTTTTAAATTCTTCTCCTGCGACTTTTGGAAATGATCTTTGGGCACTTGGC
TGCACATTGTATCAAATGCTTTCAGGAACTTCTCCGTTTAAAGATGCCAGTGAATGGCTC
ATCTTCCAGAGAATCATTGCCAGAGATATTAGATTCCCAAATTATTTTTCAAATGAAGCC
AGAGATATTATTGATCAGCTGCTGGATGTTGATCCTAGCAGAAGACCTGGTGCTGGACCT
GATGGTTATGCTTCCTTGAAAAATCATCCTTTCTTTAGTGGGATCGATTGGGAGAATTTG
AGGTTGCAGACCCCTCCAAGGCTTGCCATGGAGCCAAAAGCCCCGTCAACTCATAGCAGT
GGTGATGAGCAAGATCCTTCATGGAATCCATCACACATTGGAGATGGTTCAGTTAGACCT
AACGATGGAAACGGTGCTGCTGCATCAGTTTCTGAAGCTGGTAACAGTATCACCAGGCTC
GCATCTATCGACTCCTTTGACTCAAAATGGAAGCAATTTTTAGATCCTGGTGAATCCGTG
CTCATGATCTCGATGGTGAAAAAGTTGCAGAAACTCACAAGCAAGAAAGTTCAGCTAATC
CTAACAAATAAACCAAAGTTGATTTACGTAGATCCCTCAAAGTTGGTGATCAAAGGGAAC
ATTATATGGTCCGACAATCCTAACGATCTTAGCATTCAAGTCACAAGCCCTTCACAGTTC
AAGATTTGTACACCAAAGAAAGTTATGTCATTCGAGGATGCCAAAAACCGAGCACAACAG
TGGAAAAAGGCGATTGAAGCTCTCCAGAACCGGTGATTCTGGTCTTTTTGTTGTTTTGAC
TACACATTCTTTGCAGATCGAACGGGGTTCCAGAAACAGTTGGATGCTCCTAAAAAGAAC
TTCTTATCAAACACCACTCAATTTTACAGCTTTACTCTCTCTAGTAGAAATTTTCACTTA
TCCTTGGATGAAGCTCACTCCTGTTTACACAAATCACATTTGTATGTTTACAGACTTGTA
AAGACACAAAAGTTTTATTGAAAGAACTTGATGAGCTGATTTTATCAGCTATTTTGCTAT