Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g007600.2.1
CDS Infomation

Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO)
Sequence

ATGGACGCGATCTTCTCTTCGTCTCAAGCTTTGTTGAATGCTCATAGTGGCATTACTAAC
CATGTTGGATTCATTTGGCAACAAACTAGAACTCCTTTGGTTGTACAATTTCTAAGATTA
ATTTTATATGTTTGTTTGGCCTTATCATTTATGTTATTTGTTGAGAGACTTTACATGGGA
ATTGTCATAGCATTTGTAAAGTTGTTTAGAAGAAAACCAGAGAAGAAGTACAAGTGGGAG
CCACTTAAAGGCGATTTGGAATTAGGAAATTATTCATATCCTATGGTTTTAGTGCAAATA
CCAATGTGCAATGAAAAAGAGGTGTATCAATTGTCCATTGGAGCAGCTTGTAACCTTTCA
TGGCCAGCCAATAGAATTTTCATCCAAGTTCTTGATGATTCTACTGACCCTACAATTAAG
GCGTTGGTGGAGCAAGAGTGCAGGAGATGGGCAAGCAAAGGAGTTAACATTAAGTATGAG
ATAAGAGATAACAGGAAAGGGTACAAAGCTGGGGCTCTTAGAGAAGGAATGAAGCATAGT
TATGTGAAGCTTTGTAGTCATGTAGCCATCTTTGATGCTGATTTTCAACCCGAGCCCGAT
TTCTTGGAGCGTAGCATCCCGTTTCTGGTGCACAACCCTGAAATCGGACTCGTTCAAGCT
CGTTGGGAATTTGTGAATGCTGAGGAGTGTTTGATGACAAAAATGCAAGAAATGTCATTT
GGTTACCATTTCACAGTGGAGCAAGAAGTTGGATCTACAGCTCATGCATTTTTTGGCTTC
AATGGCACTGCTGGAGTTTGGAGAATGTCAGCTCTTATTGAGGCAGGGGGATGGAAAGAC
AGAACAACTGTGGAAGACATGGATCTAGCAGTACGAGCCGGTTTAAATGGCTGGAAATTC
GTCTATGTTGATGACCTTAAGGTGAAAAGTGAATTGCCAAGCACGTTTAGGGCCTATCGC
AATCAGCAACACAGATGGTCTTGTGGACCTGCTAATCTTTTCAGAAAAATGGCAATGGAA
ATTGCAACTAACAAGAAAGTTTCTGTATGGAAGAAATTTTACCTGATTTACAGCTTCTTC
TTTGTACGAAAGATCATAGCACACGTCGTGACATTCATCTTATATTGTGTTGTTATTCCT
GCAACGATTTTCATCCCTGAAGTTCAAGTACCTCGATGGGGAACTATATACATTCCTACA
GCTATCACTGTTCTCAATATACTTGGCTCCGCAAGATCAATGCAACTGGTGGTATATTGG
ATCCTGTTTGAGAATGTAATGTCCCTTCATCGGACAAAGGCAATGCTCATTGGTCTTTTT
GAATCGGAGAGAGTGAATGAATGGATAGTAACAGAGAAACTCGGAGATGCTCTTAAGACC
AAAAAGGGCTCAAAAGCACTGAAGAGACTTCAGTTTCGAGTTGGAGAGAGGGTACATGTT
CTTGAGCTTTTCGTTGGGTTGTACCTGCTGTTTTGTGGGTGGTACGACTACTCGTTTGGA
AGGAACAAGTTCTATGTATACCTCTTACTCCAAGCTATGGCGTTTTTCGTTGTTGGTTTT
GGTTATGTTGGTGTTTTTGTTCATGAATAG

Peptide Sequence

PEP ID

Solyc11g007600.2.1
PEP Infomation

Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO)
Sequence

MDAIFSSSQALLNAHSGITNHVGFIWQQTRTPLVVQFLRLILYVCLALSFMLFVERLYMG
IVIAFVKLFRRKPEKKYKWEPLKGDLELGNYSYPMVLVQIPMCNEKEVYQLSIGAACNLS
WPANRIFIQVLDDSTDPTIKALVEQECRRWASKGVNIKYEIRDNRKGYKAGALREGMKHS
YVKLCSHVAIFDADFQPEPDFLERSIPFLVHNPEIGLVQARWEFVNAEECLMTKMQEMSF
GYHFTVEQEVGSTAHAFFGFNGTAGVWRMSALIEAGGWKDRTTVEDMDLAVRAGLNGWKF
VYVDDLKVKSELPSTFRAYRNQQHRWSCGPANLFRKMAMEIATNKKVSVWKKFYLIYSFF
FVRKIIAHVVTFILYCVVIPATIFIPEVQVPRWGTIYIPTAITVLNILGSARSMQLVVYW
ILFENVMSLHRTKAMLIGLFESERVNEWIVTEKLGDALKTKKGSKALKRLQFRVGERVHV
LELFVGLYLLFCGWYDYSFGRNKFYVYLLLQAMAFFVVGFGYVGVFVHE*

Transcript Sequence

Transcript ID

Solyc11g007600.2.1
Transcript Infomation

Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO)
Sequence

AATTTAGATGAATGAATCATTATGTGGGGTTAGTTTTATCTCAAAGCCTTCATCCAAAGG
CTCTTTACTTTGTTTCTTCTTAGTCAAGTTTTTGCTTGGCAAATAAGCAAAAATCAAAGG
CTTTCTTCCCACTAAAACTTAAAGCACATATTGTATATATCATTGCTCTTCTTGTCTTAA
AGCACATATTGCATATATCATTGCTCTTCTTGTCTTAAAGCAACATATTTATATTCCTAC
ACACATTCACTCTCACACATTTATAAAACCTCATAAGTTTTCATTCTTGATACTCGAAAC
TCTCATATCTTAGTTATTATCTTCAACGCGACAATTCTAATCGCCTTCCTTATGGACGCG
ATCTTCTCTTCGTCTCAAGCTTTGTTGAATGCTCATAGTGGCATTACTAACCATGTTGGA
TTCATTTGGCAACAAACTAGAACTCCTTTGGTTGTACAATTTCTAAGATTAATTTTATAT
GTTTGTTTGGCCTTATCATTTATGTTATTTGTTGAGAGACTTTACATGGGAATTGTCATA
GCATTTGTAAAGTTGTTTAGAAGAAAACCAGAGAAGAAGTACAAGTGGGAGCCACTTAAA
GGCGATTTGGAATTAGGAAATTATTCATATCCTATGGTTTTAGTGCAAATACCAATGTGC
AATGAAAAAGAGGTGTATCAATTGTCCATTGGAGCAGCTTGTAACCTTTCATGGCCAGCC
AATAGAATTTTCATCCAAGTTCTTGATGATTCTACTGACCCTACAATTAAGGCGTTGGTG
GAGCAAGAGTGCAGGAGATGGGCAAGCAAAGGAGTTAACATTAAGTATGAGATAAGAGAT
AACAGGAAAGGGTACAAAGCTGGGGCTCTTAGAGAAGGAATGAAGCATAGTTATGTGAAG
CTTTGTAGTCATGTAGCCATCTTTGATGCTGATTTTCAACCCGAGCCCGATTTCTTGGAG
CGTAGCATCCCGTTTCTGGTGCACAACCCTGAAATCGGACTCGTTCAAGCTCGTTGGGAA
TTTGTGAATGCTGAGGAGTGTTTGATGACAAAAATGCAAGAAATGTCATTTGGTTACCAT
TTCACAGTGGAGCAAGAAGTTGGATCTACAGCTCATGCATTTTTTGGCTTCAATGGCACT
GCTGGAGTTTGGAGAATGTCAGCTCTTATTGAGGCAGGGGGATGGAAAGACAGAACAACT
GTGGAAGACATGGATCTAGCAGTACGAGCCGGTTTAAATGGCTGGAAATTCGTCTATGTT
GATGACCTTAAGGTGAAAAGTGAATTGCCAAGCACGTTTAGGGCCTATCGCAATCAGCAA
CACAGATGGTCTTGTGGACCTGCTAATCTTTTCAGAAAAATGGCAATGGAAATTGCAACT
AACAAGAAAGTTTCTGTATGGAAGAAATTTTACCTGATTTACAGCTTCTTCTTTGTACGA
AAGATCATAGCACACGTCGTGACATTCATCTTATATTGTGTTGTTATTCCTGCAACGATT
TTCATCCCTGAAGTTCAAGTACCTCGATGGGGAACTATATACATTCCTACAGCTATCACT
GTTCTCAATATACTTGGCTCCGCAAGATCAATGCAACTGGTGGTATATTGGATCCTGTTT
GAGAATGTAATGTCCCTTCATCGGACAAAGGCAATGCTCATTGGTCTTTTTGAATCGGAG
AGAGTGAATGAATGGATAGTAACAGAGAAACTCGGAGATGCTCTTAAGACCAAAAAGGGC
TCAAAAGCACTGAAGAGACTTCAGTTTCGAGTTGGAGAGAGGGTACATGTTCTTGAGCTT
TTCGTTGGGTTGTACCTGCTGTTTTGTGGGTGGTACGACTACTCGTTTGGAAGGAACAAG
TTCTATGTATACCTCTTACTCCAAGCTATGGCGTTTTTCGTTGTTGGTTTTGGTTATGTT
GGTGTTTTTGTTCATGAATAGTAGCTTGATATTCTTTTATACCACAATGTGTATAAGCAA
CTAAGATCATGCTTTACTTGTATTTGTTTTTTGTTTTTTTGGTTCTTTTTCATTATTTGT
GAATGAGCAAGGCATAAGAGAATTCTATAATTGATTAATTTCATAGACAAACCACAGTC