Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g007320.2.1
CDS Infomation

Galactose oxidase/kelch repeat protein (AHRD V3.3 *** A0A072VN65_MEDTR)
Sequence

ATGCACTACTGGGTTCGAGCATCTCCGGCAGATTTCGCCGGAGCAATTCCACTACCTCGA
AGTGGACATACTGCTGTTAACATTGGGAAATCGAAAGTTGTGGTGTTCGGAGGATTAATT
GATAAGAAGTTCCTTAGAGACATCACTGTGTATGATATTGAAAACAAATTGTGGTTTCAG
CCAGAGTGCACGGGCAGTGGTTCTGATGGCCAAGTTGGTCCTAGCCCACGAGCATTCCAT
GTTGCTGTCACAATTGACTGTCATATGTTCATCTTTGGTGGAAGATCTGGCGGTAGAAGG
TTGGGTGATTTTTGGGTCCTGGATACTGATATATGGCAATGGTCAGAGCTGACAAGTTTT
GGTGACTTACCTTCTGCAAGGGATTTTGCAGCTGCTTCAGCCATTGGAAAGAGTAAAATT
GTAATGTTTGGTGGCTGGGATGGTAAAAAGTGGTTGTCGGACGTCTATATCTTGGACACA
ATGACTCTTGAATGGAGGGAGCTAGCTGTTTTGGGAACTGTACCTCCGCCTAGATGTGGC
CATACTGCTACTATGGTTGAGAAAAGATTGCTTGTCTATGGTGGTAGAGGAGGAGGAGGG
CCAATCATGGCCGACTTATGGGCTTTGAAGGGCCTTATTGAAGAAGAGAATGAAAGCCCT
GGCTGGACCCAACTGAAGATTCCAGGTCAAGCTCCTACAGCGCGTTGTGGACATACAGTT
ACATCTGGAGGCCTCCATCTCCTGTTATTTGGAGGTCATGGAACTGGTGGTTGGTTGAGT
CGATATGATGTTTACTACAATGATTGTGTTGTTTTAGACAGGGTGTCTGTACATTGGAAA
CGCCTACCAACTACTAATGAACCGCCAGTTGCACGAGCATACCACTCAATGACCTCAGTT
GGGTCACGGTATTTGCTGTTTGGAGGGTTCGATGGAAAATCAACTTATGGTGATCTGTGG
TGGTTAGTTCCAGAAGATGATCCAATTGCTAAGCGCGTAACGGCTTCTCCTCCCAAGGCA
ATCCATGAAAACCAGGATGCTTCAATGACAAGTATGGAGAAGGAGAGGCAAATGCAAGAA
GATGCTGTATCAGAGTTGCAGAAAAGGATAGGAATTTCAGTATCCATCTCCGATTCCAAT
GTGAAGAAAATTGTAGATGAGTTGGAAGATACAGAATTATTAGAATTGGCATCTAAATTC
ATTGGAGAGGGAGCTCTCAGTAATAAGGAGGCTGTACAAGCACTTCGCGACCACTGGTCA
AAGTCCTCACCGAAGTCTATTCAATTAAAAGAGCTTAGCCCATTACTCCGTGACTACAAG
CGCAGTGTTACCCGCATTAAAGAGGAAAATCTTGGAGCATTCTTGCAATCAATGAATGCT
GGATCTCTGGGGAAAGAGACTTATAGATTCCATCATATTAAGAATGTTAGTCAGTTGCGT
ATGGATGATATCCCACATCTGCTGGCTGAGTACAGACAACTCCTTCTGGATTTAGGATCA
AGCTAA

Peptide Sequence

PEP ID

Solyc11g007320.2.1
PEP Infomation

Galactose oxidase/kelch repeat protein (AHRD V3.3 *** A0A072VN65_MEDTR)
Sequence

MHYWVRASPADFAGAIPLPRSGHTAVNIGKSKVVVFGGLIDKKFLRDITVYDIENKLWFQ
PECTGSGSDGQVGPSPRAFHVAVTIDCHMFIFGGRSGGRRLGDFWVLDTDIWQWSELTSF
GDLPSARDFAAASAIGKSKIVMFGGWDGKKWLSDVYILDTMTLEWRELAVLGTVPPPRCG
HTATMVEKRLLVYGGRGGGGPIMADLWALKGLIEEENESPGWTQLKIPGQAPTARCGHTV
TSGGLHLLLFGGHGTGGWLSRYDVYYNDCVVLDRVSVHWKRLPTTNEPPVARAYHSMTSV
GSRYLLFGGFDGKSTYGDLWWLVPEDDPIAKRVTASPPKAIHENQDASMTSMEKERQMQE
DAVSELQKRIGISVSISDSNVKKIVDELEDTELLELASKFIGEGALSNKEAVQALRDHWS
KSSPKSIQLKELSPLLRDYKRSVTRIKEENLGAFLQSMNAGSLGKETYRFHHIKNVSQLR
MDDIPHLLAEYRQLLLDLGSS*

Transcript Sequence

Transcript ID

Solyc11g007320.2.1
Transcript Infomation

Galactose oxidase/kelch repeat protein (AHRD V3.3 *** A0A072VN65_MEDTR)
Sequence

GCTCATATGATTTCAGGTGATTGAAGTTCTCGAAAAAAAGAGAAGCGAAAATGCACTACT
GGGTTCGAGCATCTCCGGCAGATTTCGCCGGAGCAATTCCACTACCTCGAAGTGGACATA
CTGCTGTTAACATTGGGAAATCGAAAGTTGTGGTGTTCGGAGGATTAATTGATAAGAAGT
TCCTTAGAGACATCACTGTGTATGATATTGAAAACAAATTGTGGTTTCAGCCAGAGTGCA
CGGGCAGTGGTTCTGATGGCCAAGTTGGTCCTAGCCCACGAGCATTCCATGTTGCTGTCA
CAATTGACTGTCATATGTTCATCTTTGGTGGAAGATCTGGCGGTAGAAGGTTGGGTGATT
TTTGGGTCCTGGATACTGATATATGGCAATGGTCAGAGCTGACAAGTTTTGGTGACTTAC
CTTCTGCAAGGGATTTTGCAGCTGCTTCAGCCATTGGAAAGAGTAAAATTGTAATGTTTG
GTGGCTGGGATGGTAAAAAGTGGTTGTCGGACGTCTATATCTTGGACACAATGACTCTTG
AATGGAGGGAGCTAGCTGTTTTGGGAACTGTACCTCCGCCTAGATGTGGCCATACTGCTA
CTATGGTTGAGAAAAGATTGCTTGTCTATGGTGGTAGAGGAGGAGGAGGGCCAATCATGG
CCGACTTATGGGCTTTGAAGGGCCTTATTGAAGAAGAGAATGAAAGCCCTGGCTGGACCC
AACTGAAGATTCCAGGTCAAGCTCCTACAGCGCGTTGTGGACATACAGTTACATCTGGAG
GCCTCCATCTCCTGTTATTTGGAGGTCATGGAACTGGTGGTTGGTTGAGTCGATATGATG
TTTACTACAATGATTGTGTTGTTTTAGACAGGGTGTCTGTACATTGGAAACGCCTACCAA
CTACTAATGAACCGCCAGTTGCACGAGCATACCACTCAATGACCTCAGTTGGGTCACGGT
ATTTGCTGTTTGGAGGGTTCGATGGAAAATCAACTTATGGTGATCTGTGGTGGTTAGTTC
CAGAAGATGATCCAATTGCTAAGCGCGTAACGGCTTCTCCTCCCAAGGCAATCCATGAAA
ACCAGGATGCTTCAATGACAAGTATGGAGAAGGAGAGGCAAATGCAAGAAGATGCTGTAT
CAGAGTTGCAGAAAAGGATAGGAATTTCAGTATCCATCTCCGATTCCAATGTGAAGAAAA
TTGTAGATGAGTTGGAAGATACAGAATTATTAGAATTGGCATCTAAATTCATTGGAGAGG
GAGCTCTCAGTAATAAGGAGGCTGTACAAGCACTTCGCGACCACTGGTCAAAGTCCTCAC
CGAAGTCTATTCAATTAAAAGAGCTTAGCCCATTACTCCGTGACTACAAGCGCAGTGTTA
CCCGCATTAAAGAGGAAAATCTTGGAGCATTCTTGCAATCAATGAATGCTGGATCTCTGG
GGAAAGAGACTTATAGATTCCATCATATTAAGAATGTTAGTCAGTTGCGTATGGATGATA
TCCCACATCTGCTGGCTGAGTACAGACAACTCCTTCTGGATTTAGGATCAAGCTAAAAAC
ATCAAGTTCTATATGGTATATTTCATCGCGAGCTTATCTTAAAGATTAATTGTACCGCTC
TTTGTCAATCCTTATGAATGAGCTACGACATGCAAAATCTTGAATTTACTCCATAAACTT
CCTAGCTCTCTGGCAGATTATGAAAGCTTTTTCCTATATCGACATTTATACCTCTGCTGT
TTTTATTTGCCACAACGACATTATAGTAACGAATATACGCCATCCTTCATATAGTTTAGA
ATCCGTACATTGCATTAAGCTTTTCTCCCTCAATTTCTGTAGTTTCATGTA