Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g007110.2.1
CDS Infomation

Single-stranded nucleic acid-binding protein R3H (AHRD V3.3 *** G7I367_MEDTR)
Sequence

ATGGAGGGCTCTGTGTCTGTTGCTGATGATCTCGGAGCCCCACCGGAGTCATGGGAGGTG
GCTGACTTGGATGCTAGTATGAGACGGCTCATACTTTCTTCTTCGAAGAAGGATGCTGAT
TCTTCATCTTCTTCTGTGAATGATAATCAATCTGAGCTGCCTGATTCATCGGCTTTGGCT
GGTGCTGGTTCAGCTGCTGTTTCCGGGAGTGTGTCGGAGGATGTTGTTAACACTGTGGAT
CAGTTTCTCCGTGAGGCTTTACAAAACCCTCGAGAGCGTCTTTCCGTTCTGAGGATGGAG
CAAGATGTTGAGAAGTTCATTAGGGATCCTGGTCGACAACAGATGGAATTCCAACAGCTG
CCTACCTCCTATTTGCGACTGGCTGCTCACCGCGTGGCACAGCACTATTCATTACAATCA
ATGGTTCTGTTGGACAATAGTTTACCGGATGGCTCGGGTTCCAGAATTATTGTGCGCAAG
ACTTCTGAATGTCGGATGCCGTTGATTCGCCTGGCTGACATTCCGGTGAATTTGCCTCAA
GGAGATACTGGTGTGGTTAAGGTTGCGATAAAGCAGAGGCCACAGAAAGGTTCACAGTTA
GCAAGTGGTTTGAATTCAAACTCATCAAAGGGAAATTCTGCTAAAAGTGTTGAGGAAAGG
AAGGAGGAATATAATAGGGCTCGAGCACGTATATTTAACTCTAATAGTTTAAGTGGAAGC
TCCAATGTAAAACCTGAAACTGAATCAAGGTCACAAGATACTTACCAGTATGGTCCTATA
GGCATACCACAGTTGGAAGAAAAAGCCAGTCCAGCTGGCGGCTCTGATTTGAATACTGGG
CGGAGTCTGATTGATTCTTCAACAAGTAGCAGTAGGTCGGCTAGAAGTAGGACAGAAAAG
GAGCCAGTTGGTAGGTCTAAATCTTATAATAAAGTTGCTATCTTTCGCGATCGGGAAATT
GACAGGAAGGACCCTGATTATGACAGGAATTACGACAGGTACATGCAAAGGTTTGATCCT
GGGTTTGGATTCGCTGGTGGCCCATACACAATTCAACCCATGTATGCTCCTGCAATAAAC
TATAATACTGAGTTTCCCCAGCTTGGATCTGCTCTTAGGTCTCCCATTTCTGCTGAAAAC
CAACCTCGTCCACTTCCTCAACATTTACCTGGGCCTTGGACAACACCAACGACTCCAGGT
ATTGGTTATGGTCCAGCAGAGAGCATGATGCCTCCCCCTTTTAGTCACAATCATGTTAGT
GCACGCTCAAACTCAGCTATATATTTACATTCAACCCAGTATCCTTGTCAGCGTCCTGGA
ATGACTTTTATCCATCCTCATGAGCAGGTTCACCAACCCTTCTCACAGTCTCATGCGCTG
CAACCTGATGGTTTTGGATTAGCCCGGCCCCGGTGA

Peptide Sequence

PEP ID

Solyc11g007110.2.1
PEP Infomation

Single-stranded nucleic acid-binding protein R3H (AHRD V3.3 *** G7I367_MEDTR)
Sequence

MEGSVSVADDLGAPPESWEVADLDASMRRLILSSSKKDADSSSSSVNDNQSELPDSSALA
GAGSAAVSGSVSEDVVNTVDQFLREALQNPRERLSVLRMEQDVEKFIRDPGRQQMEFQQL
PTSYLRLAAHRVAQHYSLQSMVLLDNSLPDGSGSRIIVRKTSECRMPLIRLADIPVNLPQ
GDTGVVKVAIKQRPQKGSQLASGLNSNSSKGNSAKSVEERKEEYNRARARIFNSNSLSGS
SNVKPETESRSQDTYQYGPIGIPQLEEKASPAGGSDLNTGRSLIDSSTSSSRSARSRTEK
EPVGRSKSYNKVAIFRDREIDRKDPDYDRNYDRYMQRFDPGFGFAGGPYTIQPMYAPAIN
YNTEFPQLGSALRSPISAENQPRPLPQHLPGPWTTPTTPGIGYGPAESMMPPPFSHNHVS
ARSNSAIYLHSTQYPCQRPGMTFIHPHEQVHQPFSQSHALQPDGFGLARPR*

Transcript Sequence

Transcript ID

Solyc11g007110.2.1
Transcript Infomation

Single-stranded nucleic acid-binding protein R3H (AHRD V3.3 *** G7I367_MEDTR)
Sequence

GTATTAACCATGGATTCTTGTTATTTTCGATTCGTCTAATAAAAATTAAAATTTATTACA
TATAAATAATTTATTTCTTATTCGACTATACGTGATATTAGTACCATGCATGCCCTCGAA
GCAAAGCAAAATTATAATATTGTCAAACCCCTCTTTTCTGTATCCCGTCTCTCACATTCT
CTCGAAACCCTAGAACCGTTTTCCTCCTCTTTTAGATTCTCTCAATCGCTATGAAAATTT
TCGAAATCTTCGAATCTAGCTTCTCTATAATCTTGATTTACAGCTGGATTTGATGATTCC
TTTCATGTCTAAATCCTAGATTTTTTTTTGATTTTTTTTGATTTTTTTTTTGTTGGGCTA
AAAAATTGAACCCATGGAGGGCTCTGTGTCTGTTGCTGATGATCTCGGAGCCCCACCGGA
GTCATGGGAGGTGGCTGACTTGGATGCTAGTATGAGACGGCTCATACTTTCTTCTTCGAA
GAAGGATGCTGATTCTTCATCTTCTTCTGTGAATGATAATCAATCTGAGCTGCCTGATTC
ATCGGCTTTGGCTGGTGCTGGTTCAGCTGCTGTTTCCGGGAGTGTGTCGGAGGATGTTGT
TAACACTGTGGATCAGTTTCTCCGTGAGGCTTTACAAAACCCTCGAGAGCGTCTTTCCGT
TCTGAGGATGGAGCAAGATGTTGAGAAGTTCATTAGGGATCCTGGTCGACAACAGATGGA
ATTCCAACAGCTGCCTACCTCCTATTTGCGACTGGCTGCTCACCGCGTGGCACAGCACTA
TTCATTACAATCAATGGTTCTGTTGGACAATAGTTTACCGGATGGCTCGGGTTCCAGAAT
TATTGTGCGCAAGACTTCTGAATGTCGGATGCCGTTGATTCGCCTGGCTGACATTCCGGT
GAATTTGCCTCAAGGAGATACTGGTGTGGTTAAGGTTGCGATAAAGCAGAGGCCACAGAA
AGGTTCACAGTTAGCAAGTGGTTTGAATTCAAACTCATCAAAGGGAAATTCTGCTAAAAG
TGTTGAGGAAAGGAAGGAGGAATATAATAGGGCTCGAGCACGTATATTTAACTCTAATAG
TTTAAGTGGAAGCTCCAATGTAAAACCTGAAACTGAATCAAGGTCACAAGATACTTACCA
GTATGGTCCTATAGGCATACCACAGTTGGAAGAAAAAGCCAGTCCAGCTGGCGGCTCTGA
TTTGAATACTGGGCGGAGTCTGATTGATTCTTCAACAAGTAGCAGTAGGTCGGCTAGAAG
TAGGACAGAAAAGGAGCCAGTTGGTAGGTCTAAATCTTATAATAAAGTTGCTATCTTTCG
CGATCGGGAAATTGACAGGAAGGACCCTGATTATGACAGGAATTACGACAGGTACATGCA
AAGGTTTGATCCTGGGTTTGGATTCGCTGGTGGCCCATACACAATTCAACCCATGTATGC
TCCTGCAATAAACTATAATACTGAGTTTCCCCAGCTTGGATCTGCTCTTAGGTCTCCCAT
TTCTGCTGAAAACCAACCTCGTCCACTTCCTCAACATTTACCTGGGCCTTGGACAACACC
AACGACTCCAGGTATTGGTTATGGTCCAGCAGAGAGCATGATGCCTCCCCCTTTTAGTCA
CAATCATGTTAGTGCACGCTCAAACTCAGCTATATATTTACATTCAACCCAGTATCCTTG
TCAGCGTCCTGGAATGACTTTTATCCATCCTCATGAGCAGGTTCACCAACCCTTCTCACA
GTCTCATGCGCTGCAACCTGATGGTTTTGGATTAGCCCGGCCCCGGTGAGGGGCACGGGC
CATGCCTGCATCCTGCCACATACATTCAGCATCTTGAGGGGGATGCTGAGCGGCAAAATG
TTGCAATTGGTAGGGTGCAGGCATGAACAACTGAGACTTGGTGGAGTGGATTGTTCAGCT
TGCAGTATTTTCCGCATCCACCCACCAGTCTCAGTTTCACAGAGCCTCCTGCATTGCTCT
GAGGATGCTCATATTCCTTGGCAGTTCCATTGCATGGATGAGCACTCAAAAGCTATGATG
ACTATGACGGCGATGATGACGACAAATTAAATCAGCAAGAGTTCAGAGCCGGAAACTAAG
AAGTTTGATCTGTTTTAGCCTCATCAAAGCTCCAAGCAGAAATGGAACTCAGTTAGAGAT
TTCAGAGTAAATTTGTTGACAGGACATGCAGCCTAAGGTAGCTTTGGTGCTAGACTGACG
GTGATAACAAAGAGCTCTGTTCTCCTATGGCAAAAGCAAATCTCCAGGAGAGACTCTGCA
AATTATGTATTTAAACGTAAAAGTGTTTCCCCTTTTCATTTTGTTCAGACGATATTCAAC
TGATTTGGTCTTTCGCCAACTTATTTGTAGCTGAAGCGTTTTGTTCACAACTCTTTTCAT
TTCTCGTTACCAAAATGATCGTAACTGGCAATTTATCCCAGTGTTTTACTCTAAAACAGC
ATGGATTTTGACAAGTGTGA