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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g007000.2.1
CDS Infomation

Cytochrome c oxidase assembly protein COX15 (AHRD V3.3 *** COX15_ARATH)
Sequence

ATGTTAGAGAGCAGATTAATTTCACTTTTGCGGAAAAACAAAGATTTGGGTGTCAAGATT
TCGTCGAATCTTGGAAAATGGGGCTTTACAGCAACCAAAATTTCAAATGAAGCTTCATTT
TCAACATTGAATCAGTATAGGCTTTTATCTTCTCTTCCAAAGCTTGCTCCTTCTAGAAGA
AACTTTGTTAGGAGGACCTTTGTTAACTATGGTTTAAGATCTTTTCATCAACTTAATCAC
AAGGGTGTGCATAGAACGTCTTTCAGAAAAATTTCCACGGTGGCTGCTTCTGCAGCTGAA
AACAAGGAGGGACTGAAGTTCCTTGTAATTGCGGGACCCCATGCCCGGAAAATGGTCGGC
ATATGGCTTTTTACATCTGCTGCTTGGGTCTTCAGTATGGTTGTGCTTGGTGGTATCACA
CGGTTGACACGTTCTGGTCTATCAATGACGGACTGGAAATTCACTGGGAGCCTCCCTCCT
CTAACAGATGAAGATTGGTTGGTTGAATTTGAGAAGTACAAGCAATCCCCAGAATACAAA
CGTGTGAACAAGGGGATGAACATCGAGGATTTCAAGTTCATATATTGGATGGAATATGCA
CACAGAATGTGGGGAAGGGCCCTTGGTATAATGTTTGCACTCCCATTCTCATATTTTCTC
CGTAAGGGATACATAACAGTAAGACTTGGATTTAGACTCTCTGGACTCTTTGCTCTTGGT
GCTGGACAGGGTCTCATAGGTTGGTGGATGGTGAAGAGTGGTTTAGAGGAGCCTGCATCT
GAGTATGTTGAACCAAGAGTAAGCCCCTACCGTCTTGCAGCTCATCTTACCTCTGCATTT
GCTATTTATTGCGGACTCTTCTGGACGGCTCTTTCTGTTGTTATGCCTGAACCTCCTGCG
GAATCACTTGCCTGTGTTCGCGGGGCTGCAAAAGTTAAGCGGCTTGCACTTCCTGTGGGT
ATCCTTGTTGGAATTACTGCGATCTCTGGAGCTTTTGTTGCTGGAAATGACGCTGGCCGG
GCATTCAATACTTTTCCAAAGATGGGAGACACATGGATTCCAGATGATATCTTTAGTATG
AAACCTCTTATCCGCAACTTCTTTGAGAATACTTCAACAGTTCAGCTCGATCATCGTATT
CTTGCCACTGCTACTTTAGCTGCAATAGGCGGATTATGGTTGTCAGCCAGAAAGCTGGAT
ATGCATCCTGCAGTAAGACATTTAATTGGAAGCACTATGGGTATGGCTGCTCTGCAGGTC
ACACTGGGCATATCTACTCTTCTTTCCTATGTCCCAGTTTCTCTAGGAGCTGCTCATCAA
GCAGGAGCATTGACTCTTTTAACATTCATGATTTTGCTCAATCACACTGTACGACGACCT
TCTCCATCACTTCTGAAGACATTACCTTCTGTCGCGAAAATGGTCTGA

Peptide Sequence

PEP ID

Solyc11g007000.2.1
PEP Infomation

Cytochrome c oxidase assembly protein COX15 (AHRD V3.3 *** COX15_ARATH)
Sequence

MLESRLISLLRKNKDLGVKISSNLGKWGFTATKISNEASFSTLNQYRLLSSLPKLAPSRR
NFVRRTFVNYGLRSFHQLNHKGVHRTSFRKISTVAASAAENKEGLKFLVIAGPHARKMVG
IWLFTSAAWVFSMVVLGGITRLTRSGLSMTDWKFTGSLPPLTDEDWLVEFEKYKQSPEYK
RVNKGMNIEDFKFIYWMEYAHRMWGRALGIMFALPFSYFLRKGYITVRLGFRLSGLFALG
AGQGLIGWWMVKSGLEEPASEYVEPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPA
ESLACVRGAAKVKRLALPVGILVGITAISGAFVAGNDAGRAFNTFPKMGDTWIPDDIFSM
KPLIRNFFENTSTVQLDHRILATATLAAIGGLWLSARKLDMHPAVRHLIGSTMGMAALQV
TLGISTLLSYVPVSLGAAHQAGALTLLTFMILLNHTVRRPSPSLLKTLPSVAKMV*

Transcript Sequence

Transcript ID

Solyc11g007000.2.1
Transcript Infomation

Cytochrome c oxidase assembly protein COX15 (AHRD V3.3 *** COX15_ARATH)
Sequence

AGAACGCAGCAACATAAACTCAACACGCACAAAAATTTACAGCAAATTTGATAGAAAAAA
TCGAAATCCAGAAAAGAGCAATGTTAGAGAGCAGATTAATTTCACTTTTGCGGAAAAACA
AAGATTTGGGTGTCAAGATTTCGTCGAATCTTGGAAAATGGGGCTTTACAGCAACCAAAA
TTTCAAATGAAGCTTCATTTTCAACATTGAATCAGTATAGGCTTTTATCTTCTCTTCCAA
AGCTTGCTCCTTCTAGAAGAAACTTTGTTAGGAGGACCTTTGTTAACTATGGTTTAAGAT
CTTTTCATCAACTTAATCACAAGGGTGTGCATAGAACGTCTTTCAGAAAAATTTCCACGG
TGGCTGCTTCTGCAGCTGAAAACAAGGAGGGACTGAAGTTCCTTGTAATTGCGGGACCCC
ATGCCCGGAAAATGGTCGGCATATGGCTTTTTACATCTGCTGCTTGGGTCTTCAGTATGG
TTGTGCTTGGTGGTATCACACGGTTGACACGTTCTGGTCTATCAATGACGGACTGGAAAT
TCACTGGGAGCCTCCCTCCTCTAACAGATGAAGATTGGTTGGTTGAATTTGAGAAGTACA
AGCAATCCCCAGAATACAAACGTGTGAACAAGGGGATGAACATCGAGGATTTCAAGTTCA
TATATTGGATGGAATATGCACACAGAATGTGGGGAAGGGCCCTTGGTATAATGTTTGCAC
TCCCATTCTCATATTTTCTCCGTAAGGGATACATAACAGTAAGACTTGGATTTAGACTCT
CTGGACTCTTTGCTCTTGGTGCTGGACAGGGTCTCATAGGTTGGTGGATGGTGAAGAGTG
GTTTAGAGGAGCCTGCATCTGAGTATGTTGAACCAAGAGTAAGCCCCTACCGTCTTGCAG
CTCATCTTACCTCTGCATTTGCTATTTATTGCGGACTCTTCTGGACGGCTCTTTCTGTTG
TTATGCCTGAACCTCCTGCGGAATCACTTGCCTGTGTTCGCGGGGCTGCAAAAGTTAAGC
GGCTTGCACTTCCTGTGGGTATCCTTGTTGGAATTACTGCGATCTCTGGAGCTTTTGTTG
CTGGAAATGACGCTGGCCGGGCATTCAATACTTTTCCAAAGATGGGAGACACATGGATTC
CAGATGATATCTTTAGTATGAAACCTCTTATCCGCAACTTCTTTGAGAATACTTCAACAG
TTCAGCTCGATCATCGTATTCTTGCCACTGCTACTTTAGCTGCAATAGGCGGATTATGGT
TGTCAGCCAGAAAGCTGGATATGCATCCTGCAGTAAGACATTTAATTGGAAGCACTATGG
GTATGGCTGCTCTGCAGGTCACACTGGGCATATCTACTCTTCTTTCCTATGTCCCAGTTT
CTCTAGGAGCTGCTCATCAAGCAGGAGCATTGACTCTTTTAACATTCATGATTTTGCTCA
ATCACACTGTACGACGACCTTCTCCATCACTTCTGAAGACATTACCTTCTGTCGCGAAAA
TGGTCTGATGATATTGATACCGTTAACTTCTTATAGAGCATCGACGTTGTTAGGCATTTG
AAATTTTTTAAAAAATATTGCATTTTTTTCTGCCCTTCTTGTTCTCATATGTTGTTGGGA
AATTTAGAATGATTTAGTCTTGTAAAGAAACTGTAATCTTGTACTTTTGTCTATGCTCAT
TCAATGAGTCTTTAGAGAATCAACTTTAACAGTGTGGGGGAAAGGAAAATTCCTCTTTGT
TGAATAAGTTCTATTCTAGTTGTCTACAAAGATAAAAGTTCTTGGATATGTACTTTTTCT
AAAAAAAATTATGTTTGCTAAGCTTGTTGTTCTCAATTGAGGAAGGTTTTTGGTGACTAA
GATA