Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc11g006980.1.1
CDS Infomation	Germin family 1 protein (AHRD V3.3 *** A0A072VRM6_MEDTR)
Sequence	ATGATTCCTTCACAAATGATAGTTTTTCTAGTTATTTTTCTTCAAAGCTATATAAGCCTA GCATATGATCCTAATCCAGTTAATGATTACTGCATTCCAAGAACAGAGTTTTCTTCAATC TTCCTTTCTTGCAAGAATACATCACTTGTCACAGTCGATGATTTTATCTATTCGGGGATT AAAGATCCCGGAAACTATAAGCATACTGGATTTTCATCCATTCCAGTAAGCTCCACTGTC TTTCCTGGACTTAACACATTAGGGATGTCATTTGTGCGCGCTGATTTTGACATTGATGGT GTCAACGTGCCACATTTTCATCCGAGAGCAACAGAGACTGCATTCGTGCTCGAGGGGAAG ATTTATTCAGGGTTTGTTGATTCAGGAAACAGAGTATTTGCTAAGGTTCTTGAGAAAGGA GAAGTCATGGTGTTTCCAAAAGGTTTAGTTCACTTCCAGATGAATGTTGGCGATTCGCCA GCGACTATTTTGGGGAGCTTTAACAGCCAAAATCCTGGATTAGTGAAAATCCCATCTGCT GTTTTTGGAGCAGGAATTAAAGAGGAGCTCTTGATGAAGGCTTTTGGATTGAATGACAAG GAGATTGCTAAATTGAGGAAGAAGTTTGTTCCTCAATAG

Peptide Sequence

PEP ID	Solyc11g006980.1.1
PEP Infomation	Germin family 1 protein (AHRD V3.3 *** A0A072VRM6_MEDTR)
Sequence	MIPSQMIVFLVIFLQSYISLAYDPNPVNDYCIPRTEFSSIFLSCKNTSLVTVDDFIYSGI KDPGNYKHTGFSSIPVSSTVFPGLNTLGMSFVRADFDIDGVNVPHFHPRATETAFVLEGK IYSGFVDSGNRVFAKVLEKGEVMVFPKGLVHFQMNVGDSPATILGSFNSQNPGLVKIPSA VFGAGIKEELLMKAFGLNDKEIAKLRKKFVPQ*

Transcript Sequence

Transcript ID	Solyc11g006980.1.1
Transcript Infomation	Germin family 1 protein (AHRD V3.3 *** A0A072VRM6_MEDTR)
Sequence	ATGATTCCTTCACAAATGATAGTTTTTCTAGTTATTTTTCTTCAAAGCTATATAAGCCTA GCATATGATCCTAATCCAGTTAATGATTACTGCATTCCAAGAACAGAGTTTTCTTCAATC TTCCTTTCTTGCAAGAATACATCACTTGTCACAGTCGATGATTTTATCTATTCGGGGATT AAAGATCCCGGAAACTATAAGCATACTGGATTTTCATCCATTCCAGTAAGCTCCACTGTC TTTCCTGGACTTAACACATTAGGGATGTCATTTGTGCGCGCTGATTTTGACATTGATGGT GTCAACGTGCCACATTTTCATCCGAGAGCAACAGAGACTGCATTCGTGCTCGAGGGGAAG ATTTATTCAGGGTTTGTTGATTCAGGAAACAGAGTATTTGCTAAGGTTCTTGAGAAAGGA GAAGTCATGGTGTTTCCAAAAGGTTTAGTTCACTTCCAGATGAATGTTGGCGATTCGCCA GCGACTATTTTGGGGAGCTTTAACAGCCAAAATCCTGGATTAGTGAAAATCCCATCTGCT GTTTTTGGAGCAGGAATTAAAGAGGAGCTCTTGATGAAGGCTTTTGGATTGAATGACAAG GAGATTGCTAAATTGAGGAAGAAGTTTGTTCCTCAATAG