Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g006370.2.1
CDS Infomation

Calcium dependent protein kinase (AHRD V3.3 *** Q93XJ0_SOLTU)
Sequence

ATGGGGAACACTTGTGTAGGACCAAGTATATCTAAAAATGGAATCTTTCAATCAGTTTCA
GCAGCAATGTGGCGATCCCGGTCACCGGATGATACTGCTTCCACTGTCACTAATGGTGAA
AGTGGTAGGGTTGAAACACCAACTTCTGCTAAAGAAACTGAATCACCTTTGCCAGTTCAA
GATAAGCCACCAGAACCAATGACAATGCCTAAGTTAGAAGAGAAAGAGGAGGAAAAACCG
AAAAAGCCCAAAAAGCCGGCTGAAATGAAGAGGGTGTCTAGTGCTGGACTTAGGACTGAT
TCTGTGTTACAGAAGAAAACTGGGAATTTAAAGGAGTTTTTTAGTATAGGAAAGAAATTA
GGACAAGGGCAATTTGGAACTACATTTCTTTGTACTGAAAAAGCAACAGGGAAACGATAT
GCTTGCAAATCGATTGCTAAGAGGAAGTTGTTAACTGATGATGATGTGGAAGATGTTAGA
AGGGAAGTTCAGATAATGCATCACTTGGCAGGACATCCTCATGTTATATCGATAAAAGGG
GCTTATGAGGATGCTGTAGCTGTTCACCTTGTTATGGAGTATTGTGCCGGGGGTGAGCTT
TTCGATAGGATTATTCAACGAGGACACTATACAGAAAGAAAAGCAGCTGAGCTCACCCGG
ACTATTGTTGGAGTTGTAGAAGCTTGTCATTCTCTTGGTGTCATGCATCGTGATCTTAAG
CCTGAGAATTTTCTTTTTGTTGATCAGAAGGAGGAGTCACTTCTCAAAACAATTGACTTT
GGGTTATCAATATTCTTCAAACCAGGCGACAAATTTACTGATGTTGTTGGCAGTCCGTAT
TATGTTGCACCAGAAGTTCTCCGAAAACGTTATGGTCCTGAAGCTGATGTCTGGAGTGCT
GGTGTAATTATCTACATCTTATTAAGTGGAGTACCTCCTTTCTGGGCTGAAAATGAACAA
GGAATATTTGAACAAGTCCTGCACGGTGATCTTGACTTCACGACAGACCCGTGGCCAAGT
ATTTCAGAAGATGCAAAAGACTTGATGAGGAGAATGCTTATTCGAGATCCAAGGAAACGT
TTAACTGCACATGAAGTTTTATGCCATCCTTGGGTTCAAGTTGATGGTGTGGCGCCTGAT
AAGCCTCTGGATTCAGCAGTTCTGAGTAGAATGAAGCAATTTTCTGCAATGAACAAGCTC
AAGAAAATGGCTTTGAGAGTCATTGCTGAAAGCCTATCTGAAGAAGAAATTGCTGGTCTT
AAAGAAATGTTCAGGATGATAGACACGGACAATAGCGGTCAAATAACTTTTGAGGAGCTC
AAAGATGGATTAAAAAGATTTGGCTCTAATCTGAAGGAGTCTGAGATCTATGATCTTATG
CAAGCAGCTGATGTTGATAACAGTGGAACAATTGATTATGGTGAATTTATAGCTGCAACA
TTACACCTTAACAAAATTGAACGAGACGATCATCTTTTTGCTGCATTCTCTTACTTTGAT
AAAGATGGAAGTGGCTACATCACTGCAGACGAGCTTCAACATGCTTGTGAAGAATTTGGC
ATTGGAGATGTTCGAATGGAAGAAATGATCAGAGAAGCTGACCAGGACAATGACGGACGT
ATTGATTACAATGAGTTTGTTGCTATGATGCAAAAGGGAAATCCAGTGCTTGGTGGTGGC
AAGAAAGGTCTAGAGCAAAGTTTCAGCATTGGATTCAGAGAAGCACTAAAACTATAG

Peptide Sequence

PEP ID

Solyc11g006370.2.1
PEP Infomation

Calcium dependent protein kinase (AHRD V3.3 *** Q93XJ0_SOLTU)
Sequence

MGNTCVGPSISKNGIFQSVSAAMWRSRSPDDTASTVTNGESGRVETPTSAKETESPLPVQ
DKPPEPMTMPKLEEKEEEKPKKPKKPAEMKRVSSAGLRTDSVLQKKTGNLKEFFSIGKKL
GQGQFGTTFLCTEKATGKRYACKSIAKRKLLTDDDVEDVRREVQIMHHLAGHPHVISIKG
AYEDAVAVHLVMEYCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLK
PENFLFVDQKEESLLKTIDFGLSIFFKPGDKFTDVVGSPYYVAPEVLRKRYGPEADVWSA
GVIIYILLSGVPPFWAENEQGIFEQVLHGDLDFTTDPWPSISEDAKDLMRRMLIRDPRKR
LTAHEVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIAESLSEEEIAGL
KEMFRMIDTDNSGQITFEELKDGLKRFGSNLKESEIYDLMQAADVDNSGTIDYGEFIAAT
LHLNKIERDDHLFAAFSYFDKDGSGYITADELQHACEEFGIGDVRMEEMIREADQDNDGR
IDYNEFVAMMQKGNPVLGGGKKGLEQSFSIGFREALKL*

Transcript Sequence

Transcript ID

Solyc11g006370.2.1
Transcript Infomation

Calcium dependent protein kinase (AHRD V3.3 *** Q93XJ0_SOLTU)
Sequence

GTCAATAGTAAAAACCTTAGGCTTATTTGGACTAATCCGACCAAGATGCGTTTTTCTTGG
CTATATTGTCTGGATTTTTTAGTTAACATGTGCATTCTCACACATATATATAGCAATTTC
TCACCAAAATTTACGGCCAAAATGCATGTAAAATATAGTAATCTATCAAATTTTAGAGAC
CATTTCTCACTTTGTTGAAGTTTTGGTAGTTGTCACTTTGTTTTTCTAATCAAGATCTCA
ACTTTTTTTCCCTTTTTTGTTCTTCTTTGACCTTCCCATGTCTTAGCAGTAGTTTCCCTT
CTTGGGTTTATTAGCTTTTTCATTGTTTGTTAGTAATTTATAATTACTTGCTATGTTTAT
GTTTGTTTCTGATTCTGTTGTGTTAGCATAGCCTATATACTTGTGATATTGTTTTTGTTG
AATCTTGATTTGGTGGGGTTGGATTTGAATGCTTGTTGACTTGTTTTTAGTAGTTGATTG
TTTGATTTAAGTATCAAGATCTTATTTTTATTTGTGTAAAAGAAAGTTTTTGATGTTGGA
AGGAAGGATTTAGGGGGTTTAATAGAGGAAACAAAATGGGGAACACTTGTGTAGGACCAA
GTATATCTAAAAATGGAATCTTTCAATCAGTTTCAGCAGCAATGTGGCGATCCCGGTCAC
CGGATGATACTGCTTCCACTGTCACTAATGGTGAAAGTGGTAGGGTTGAAACACCAACTT
CTGCTAAAGAAACTGAATCACCTTTGCCAGTTCAAGATAAGCCACCAGAACCAATGACAA
TGCCTAAGTTAGAAGAGAAAGAGGAGGAAAAACCGAAAAAGCCCAAAAAGCCGGCTGAAA
TGAAGAGGGTGTCTAGTGCTGGACTTAGGACTGATTCTGTGTTACAGAAGAAAACTGGGA
ATTTAAAGGAGTTTTTTAGTATAGGAAAGAAATTAGGACAAGGGCAATTTGGAACTACAT
TTCTTTGTACTGAAAAAGCAACAGGGAAACGATATGCTTGCAAATCGATTGCTAAGAGGA
AGTTGTTAACTGATGATGATGTGGAAGATGTTAGAAGGGAAGTTCAGATAATGCATCACT
TGGCAGGACATCCTCATGTTATATCGATAAAAGGGGCTTATGAGGATGCTGTAGCTGTTC
ACCTTGTTATGGAGTATTGTGCCGGGGGTGAGCTTTTCGATAGGATTATTCAACGAGGAC
ACTATACAGAAAGAAAAGCAGCTGAGCTCACCCGGACTATTGTTGGAGTTGTAGAAGCTT
GTCATTCTCTTGGTGTCATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTTGTTGATC
AGAAGGAGGAGTCACTTCTCAAAACAATTGACTTTGGGTTATCAATATTCTTCAAACCAG
GCGACAAATTTACTGATGTTGTTGGCAGTCCGTATTATGTTGCACCAGAAGTTCTCCGAA
AACGTTATGGTCCTGAAGCTGATGTCTGGAGTGCTGGTGTAATTATCTACATCTTATTAA
GTGGAGTACCTCCTTTCTGGGCTGAAAATGAACAAGGAATATTTGAACAAGTCCTGCACG
GTGATCTTGACTTCACGACAGACCCGTGGCCAAGTATTTCAGAAGATGCAAAAGACTTGA
TGAGGAGAATGCTTATTCGAGATCCAAGGAAACGTTTAACTGCACATGAAGTTTTATGCC
ATCCTTGGGTTCAAGTTGATGGTGTGGCGCCTGATAAGCCTCTGGATTCAGCAGTTCTGA
GTAGAATGAAGCAATTTTCTGCAATGAACAAGCTCAAGAAAATGGCTTTGAGAGTCATTG
CTGAAAGCCTATCTGAAGAAGAAATTGCTGGTCTTAAAGAAATGTTCAGGATGATAGACA
CGGACAATAGCGGTCAAATAACTTTTGAGGAGCTCAAAGATGGATTAAAAAGATTTGGCT
CTAATCTGAAGGAGTCTGAGATCTATGATCTTATGCAAGCAGCTGATGTTGATAACAGTG
GAACAATTGATTATGGTGAATTTATAGCTGCAACATTACACCTTAACAAAATTGAACGAG
ACGATCATCTTTTTGCTGCATTCTCTTACTTTGATAAAGATGGAAGTGGCTACATCACTG
CAGACGAGCTTCAACATGCTTGTGAAGAATTTGGCATTGGAGATGTTCGAATGGAAGAAA
TGATCAGAGAAGCTGACCAGGACAATGACGGACGTATTGATTACAATGAGTTTGTTGCTA
TGATGCAAAAGGGAAATCCAGTGCTTGGTGGTGGCAAGAAAGGTCTAGAGCAAAGTTTCA
GCATTGGATTCAGAGAAGCACTAAAACTATAGGTCTTTGAAGAGTATCTTTTGTTCCTTT
AGGGTCGTTTCGACGCGAGATACTGTTTCTCTATTAGTTTCTTCATTTGAATATTTGTGT
TTTTAAAGAGTGTATAGTATTTAAACTAGTTTTGCTAAACAGATTGCTATTTTCCAGTTC
AATTTTCAGTTCATTCCAAATTTTGCACAATTTTTCCCTTTAAGTTTTCAGTGATCCTAT
TAAGTAATTGTATAACATGGGATGTAACAACATTATACTGCAGTTTTTAATCATGCTGTT
AATTGAAATCTTATGTT