Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g006350.1.1
CDS Infomation

aspatate carbamoyltransferase
Sequence

ATGACTATTTCTGCAACACTTTCTTCCCATGGAAAAATACTCATGTCACCACTTAGAAAG
AGTGAATGGGCAAATCAACCTGTGCTCTGTAAATCTGTTGAATTGTTCAAAAATGGACGA
AATGAATACCGTATGTCAACAAATAGCAACAAATTCCAATGCCGTGCATTGGAGATCGAA
AATAAATCTTCAACTAAGTTTCACCTTGATGATGTAATTGAATCCCAACAATTTGATAGA
GAAACTCTTAGTGCGATATTTGAAGTAGCACAGGAGATGGAGAAAATCGAGAAGAACTCG
ATTGGTGGAAGAAGTGAGATTCTTAAGGGTTATCTTATGGCTACTCTGTTTTATGAACCT
TCAACTAGAACTAGGCTTTCATTTGAATCTTCTATGAAGCGTTTAGGAGGAGAAGTACTA
ACAACTGAAAATGCTCGTGAATTTTCGTCTGCGGCGAAAGGTGAAACACTAGAAGATACA
ATTAGAACTGTTGAAGGTTACTCTGATATCATTGTTATGAGGCATTTCGAAAGTGGTGCT
GCTCGACGAGCTGCATTGACTGCATCTATTCCGATTATAAATGCAGGAGATGGTCCGGGA
CAACACCCGACTCAGGCTCTTCTAGATGTGTATACGATTGGACGAGAAATAGGGAAACTC
GATGGTATAAACATTGCTCTTGTTGGTGATTTAGCATACGGGAGGACAGTTCGTTCACTT
GCTCATTTGCTTGCGCTGTATAAAGATGTGAAGATTTACTTTGTATCCCCTGATGTTGTT
AAAATGAAGGATGACATAAAGGATTACTTGACATCAATGGGGGTTCGATGGGAGGAAAGT
GCTGATTTGATCGAGGTGGCTTCTAAATGTGACGTGGTGTATCAAACTCGGATTCAACGA
GAGAGATTTGGAGAGAGGGTTGATTTGTATGAAGAAGCTCGAGGTAAGTATATCGTTGAT
ATGAGTGTCGTAAATGCTATGCAGAAACATGCTGTAGTGATGCATCCTTTGCCAAGACTT
GATGAGATAACGGTTGATGTCGATGGTGATCCGAGGGCTGCTTATTTCAGACAAGCTAAG
AATGGTCTCTACATTCGGATGGCGCTTTTGAAGCTTCTACTCCTTGGTTGGTGA

Peptide Sequence

PEP ID

Solyc11g006350.1.1
PEP Infomation

aspatate carbamoyltransferase
Sequence

MTISATLSSHGKILMSPLRKSEWANQPVLCKSVELFKNGRNEYRMSTNSNKFQCRALEIE
NKSSTKFHLDDVIESQQFDRETLSAIFEVAQEMEKIEKNSIGGRSEILKGYLMATLFYEP
STRTRLSFESSMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGA
ARRAALTASIPIINAGDGPGQHPTQALLDVYTIGREIGKLDGINIALVGDLAYGRTVRSL
AHLLALYKDVKIYFVSPDVVKMKDDIKDYLTSMGVRWEESADLIEVASKCDVVYQTRIQR
ERFGERVDLYEEARGKYIVDMSVVNAMQKHAVVMHPLPRLDEITVDVDGDPRAAYFRQAK
NGLYIRMALLKLLLLGW*

Transcript Sequence

Transcript ID

Solyc11g006350.1.1
Transcript Infomation

aspatate carbamoyltransferase
Sequence

ATGACTATTTCTGCAACACTTTCTTCCCATGGAAAAATACTCATGTCACCACTTAGAAAG
AGTGAATGGGCAAATCAACCTGTGCTCTGTAAATCTGTTGAATTGTTCAAAAATGGACGA
AATGAATACCGTATGTCAACAAATAGCAACAAATTCCAATGCCGTGCATTGGAGATCGAA
AATAAATCTTCAACTAAGTTTCACCTTGATGATGTAATTGAATCCCAACAATTTGATAGA
GAAACTCTTAGTGCGATATTTGAAGTAGCACAGGAGATGGAGAAAATCGAGAAGAACTCG
ATTGGTGGAAGAAGTGAGATTCTTAAGGGTTATCTTATGGCTACTCTGTTTTATGAACCT
TCAACTAGAACTAGGCTTTCATTTGAATCTTCTATGAAGCGTTTAGGAGGAGAAGTACTA
ACAACTGAAAATGCTCGTGAATTTTCGTCTGCGGCGAAAGGTGAAACACTAGAAGATACA
ATTAGAACTGTTGAAGGTTACTCTGATATCATTGTTATGAGGCATTTCGAAAGTGGTGCT
GCTCGACGAGCTGCATTGACTGCATCTATTCCGATTATAAATGCAGGAGATGGTCCGGGA
CAACACCCGACTCAGGCTCTTCTAGATGTGTATACGATTGGACGAGAAATAGGGAAACTC
GATGGTATAAACATTGCTCTTGTTGGTGATTTAGCATACGGGAGGACAGTTCGTTCACTT
GCTCATTTGCTTGCGCTGTATAAAGATGTGAAGATTTACTTTGTATCCCCTGATGTTGTT
AAAATGAAGGATGACATAAAGGATTACTTGACATCAATGGGGGTTCGATGGGAGGAAAGT
GCTGATTTGATCGAGGTGGCTTCTAAATGTGACGTGGTGTATCAAACTCGGATTCAACGA
GAGAGATTTGGAGAGAGGGTTGATTTGTATGAAGAAGCTCGAGGTAAGTATATCGTTGAT
ATGAGTGTCGTAAATGCTATGCAGAAACATGCTGTAGTGATGCATCCTTTGCCAAGACTT
GATGAGATAACGGTTGATGTCGATGGTGATCCGAGGGCTGCTTATTTCAGACAAGCTAAG
AATGGTCTCTACATTCGGATGGCGCTTTTGAAGCTTCTACTCCTTGGTTGGTGA