Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g006170.2.1
CDS Infomation

DnaJ domain-containing protein (AHRD V3.3 *-* A0A118K6N5_CYNCS)
Sequence

ATGGAGCATCCTTTCTTCATCAACAATGGCCCTCCAACAAATCGATCAGAAGCTTTGCGT
TTTCTGTCAATAGCTGAGAAACTGTTAACAAATCGTGACCTAGTTGGAAGCAAGTCATTC
GCAACCCGGGCTCGTGATGCCGACCCGACATTTGCACCTGCTACCGACCAAATACTCGGC
ATCGTTGATACCTTGAACGCCGGCGACAAACGGATAAACAATCATCACTTTGACTACTAC
TCTATTCTACAGATTCCTCATAACCAAACCCAGAATGTGGATTTCATCGCTGAGCAGTAT
CGAAGGTTTGCGCTTTTACTAAACCCACAGAATAACAGTTTTCCGTTTTCTGATCAAGCT
TTTCGTCTTGTTGTGGATGCGTTTTCTGTTCTTTCTAACCCTATGAGGAAAAGTATGTAT
GATAAGGAGTTGGGTTTTTTTCTTAACCTTTACCCTGTTGCTGCGTCTACTGCACCTACT
TCTAATTTTGTGCATCAGAATGTTTATCAGTCAATGCCTAGTTCGAATGCAGACCAAATG
TTTGTGAATTTGCCTAGTCAGGATGCTGCTGGTGTAAGCTTTAGTAGAGACCCACAAGCT
GGAATTTCTATGCCACCGACGTTTCTGACTCGTGAGCAAGAAACTGTGACCTCTATGGGA
AGCTCGGACATTGGGCAGCAGCAACAGCAACCACAACAACCTGTAACATTTCTGAGACAA
CAAACACAACCTGTGACTTCTATTTCATTTTCGAACACTGATGAAAAACCTGCTACATTC
TTAAGTTTGAACCAACCACAGCCAGTAACCTCTGTGAGAAGCTTAACTAGAGAAAACCCA
CCAGTTGGTGTCCGATTGAGCTCGACACAAGGGCGGGAACCAGTGGTTACAGTAGAGCAG
CATGGGAATCAACAGCTCCCAGAGAGAAATGAGAATGTAGTGGGGAACAATGCAAATAAG
TCTGCAAGTACTAGTGATGATGTGAAGGAGCAAGAAGGGAATGTAGATGGATCAGGAAAC
AATGACGACAATTTGCAAGATGGTTTAGCAACTCAAGGTGGTGTGGAAATATCCCATGCT
GTAACAGTTGAGTCAAGTAACAGAGGAGTCACAAGTAAGACAAGAAGGCAACGTGGGAGG
GTTGCAAAACACTTCGGGAATTTGGATTTGAATGTGGAGTTCAGTAATGAGGTTGAGGAG
CCTATAATTCAAATGAGCCGAGAAAATGAAGCAGGAGAGGGAGAAGATGACACTGTTGAA
GTAATTGGTGCTGATGATAGATTCTTGAGCTATGATGAGATGGAAATAGTGGAAATAGTT
CCTGATCTGGTGTCTGTAGTTTTGTCCCATGCCACTATTCTTGAAGAGTTCCAGACAATG
AGGGAGAAACTAGAAATGAAAAACAGGCAAATAGAATGCTATGAAATTAAGCCAGACATG
GACTTCGTTTCAGAAGGTGATGCACTCAATTTTGGGGATGAGAAAGCAAGCTCTGACCAG
AAGATTATTGTTAACCCAAGGGTGAAAAATGAAAACAGGCACTGTTCTCTTCGCACATTA
ATAGTTCTTGTGCTGCAGCAGGCTAAAGACTAA

Peptide Sequence

PEP ID

Solyc11g006170.2.1
PEP Infomation

DnaJ domain-containing protein (AHRD V3.3 *-* A0A118K6N5_CYNCS)
Sequence

MEHPFFINNGPPTNRSEALRFLSIAEKLLTNRDLVGSKSFATRARDADPTFAPATDQILG
IVDTLNAGDKRINNHHFDYYSILQIPHNQTQNVDFIAEQYRRFALLLNPQNNSFPFSDQA
FRLVVDAFSVLSNPMRKSMYDKELGFFLNLYPVAASTAPTSNFVHQNVYQSMPSSNADQM
FVNLPSQDAAGVSFSRDPQAGISMPPTFLTREQETVTSMGSSDIGQQQQQPQQPVTFLRQ
QTQPVTSISFSNTDEKPATFLSLNQPQPVTSVRSLTRENPPVGVRLSSTQGREPVVTVEQ
HGNQQLPERNENVVGNNANKSASTSDDVKEQEGNVDGSGNNDDNLQDGLATQGGVEISHA
VTVESSNRGVTSKTRRQRGRVAKHFGNLDLNVEFSNEVEEPIIQMSRENEAGEGEDDTVE
VIGADDRFLSYDEMEIVEIVPDLVSVVLSHATILEEFQTMREKLEMKNRQIECYEIKPDM
DFVSEGDALNFGDEKASSDQKIIVNPRVKNENRHCSLRTLIVLVLQQAKD*

Transcript Sequence

Transcript ID

Solyc11g006170.2.1
Transcript Infomation

DnaJ domain-containing protein (AHRD V3.3 *-* A0A118K6N5_CYNCS)
Sequence

ATGGAGCATCCTTTCTTCATCAACAATGGCCCTCCAACAAATCGATCAGAAGCTTTGCGT
TTTCTGTCAATAGCTGAGAAACTGTTAACAAATCGTGACCTAGTTGGAAGCAAGTCATTC
GCAACCCGGGCTCGTGATGCCGACCCGACATTTGCACCTGCTACCGACCAAATACTCGGC
ATCGTTGATACCTTGAACGCCGGCGACAAACGGATAAACAATCATCACTTTGACTACTAC
TCTATTCTACAGATTCCTCATAACCAAACCCAGAATGTGGATTTCATCGCTGAGCAGTAT
CGAAGGTTTGCGCTTTTACTAAACCCACAGAATAACAGTTTTCCGTTTTCTGATCAAGCT
TTTCGTCTTGTTGTGGATGCGTTTTCTGTTCTTTCTAACCCTATGAGGAAAAGTATGTAT
GATAAGGAGTTGGGTTTTTTTCTTAACCTTTACCCTGTTGCTGCGTCTACTGCACCTACT
TCTAATTTTGTGCATCAGAATGTTTATCAGTCAATGCCTAGTTCGAATGCAGACCAAATG
TTTGTGAATTTGCCTAGTCAGGATGCTGCTGGTGTAAGCTTTAGTAGAGACCCACAAGCT
GGAATTTCTATGCCACCGACGTTTCTGACTCGTGAGCAAGAAACTGTGACCTCTATGGGA
AGCTCGGACATTGGGCAGCAGCAACAGCAACCACAACAACCTGTAACATTTCTGAGACAA
CAAACACAACCTGTGACTTCTATTTCATTTTCGAACACTGATGAAAAACCTGCTACATTC
TTAAGTTTGAACCAACCACAGCCAGTAACCTCTGTGAGAAGCTTAACTAGAGAAAACCCA
CCAGTTGGTGTCCGATTGAGCTCGACACAAGGGCGGGAACCAGTGGTTACAGTAGAGCAG
CATGGGAATCAACAGCTCCCAGAGAGAAATGAGAATGTAGTGGGGAACAATGCAAATAAG
TCTGCAAGTACTAGTGATGATGTGAAGGAGCAAGAAGGGAATGTAGATGGATCAGGAAAC
AATGACGACAATTTGCAAGATGGTTTAGCAACTCAAGGTGGTGTGGAAATATCCCATGCT
GTAACAGTTGAGTCAAGTAACAGAGGAGTCACAAGTAAGACAAGAAGGCAACGTGGGAGG
GTTGCAAAACACTTCGGGAATTTGGATTTGAATGTGGAGTTCAGTAATGAGGTTGAGGAG
CCTATAATTCAAATGAGCCGAGAAAATGAAGCAGGAGAGGGAGAAGATGACACTGTTGAA
GTAATTGGTGCTGATGATAGATTCTTGAGCTATGATGAGATGGAAATAGTGGAAATAGTT
CCTGATCTGGTGTCTGTAGTTTTGTCCCATGCCACTATTCTTGAAGAGTTCCAGACAATG
AGGGAGAAACTAGAAATGAAAAACAGGCAAATAGAATGCTATGAAATTAAGCCAGACATG
GACTTCGTTTCAGAAGGTGATGCACTCAATTTTGGGGATGAGAAAGCAAGCTCTGACCAG
AAGATTATTGTTAACCCAAGGGTGAAAAATGAAAACAGGCACTGTTCTCTTCGCACATTA
ATAGTTCTTGTGCTGCAGCAGGCTAAAGACTAA