Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc11g006060.1.1
CDS Infomation

Rubisco accumulation factor 1.1, chloroplastic (AHRD V3.3 *** RAF1_ARATH)
Sequence

ATGTTTTCTCTCACTGTAAACTCCCCTAAATCTTTATCTCTCTCAACCCCATTTCTCCCT
AGTCATCCCCACCCCATCCCCACCATAACCCACAAACCAAATCTCAGTCCAAGACCCATA
TCAGCACTTATCATCCCTCCTTCAGGTCAAAGAAACCAACAATATTCAACAGCACCACCA
CAACAACAGCAGCTTTATCAGCCATTTAGACCACCCCCTTCTCCTCTTCCACCGAAATTT
CGCAATCTTGACACCAATTCCAAGCTCGAAGTTCTCGCTAATCGTCTTGGACTTTGGTAT
GAATATGCCCCTTTGATACCTTCGTTAACCAGTGAAGGGTTTACGCCTTCTACACTCGAG
GAAATTACTGGGATTACTGGGGTTGAGCAGAATAGATTGGTGGTTGCTGCTCAAGTTCGT
GAAACTCTTGTTGAGTGTGGTTTGGATGAAGAAACGCTGTCGTTTTTTGAATCTGGGGGT
GCTGAATTGTTGTATGAAATTCGGTTGCTTAGTGGTAAGCAACGAACGGATGCTGCTAGT
TTTATAGTGAGGAATGGGTTTGATATGAAGCAAGCGCAGGATTTAGCTAGGTCAATGAAG
GATTTCCCGCGAAGACGAATCGATTATGGTTGGGACAAGTTTACTGGTGATTCTCCTGGT
GATTGTTTGGCTTTTTGGTTCTTTAGGCTAGCTCAAGAACATGCTGCTGCAGCTGCTGAG
GATTCGAGGGTTGAGGCAATGGAGAAGGCACTTGAAGTTGTGGAGACTGAAAGTGCTAGA
AATGTGCTTGTAGAGGTGTTAGAAGGAAAAGGGGTTGATAAAGAGAGTGTAATTGATGAG
CAGGTGAAAGTGCCTTTGGTGAGGATGAAGCTAGGGGAGGTAGCAGAGTCGACGAAAGTA
GTGGTTTTGCCTGTTTGCAAGGCGGAGAAGAGGGAGTTTGAGGTGGAGGCAGCGCCATGG
GAATGTGGTGGTGTGGGGGAGTTTGGTGTAGTGGAGGCAGAGAAGGATTGGAGGAGATGG
GTAGTTTTGCCTGGATGGCAACCAATTGCAGGATTAGAGAGAGGTGGAGTTGCAGTATCG
TTCAAGAATGGGAAGCTTTTGCCATGGAAGGAGAAGAGGAAGTACAAGGAAGAGCCAGTT
TTGGTAGTGGCTGATAGAGGAAGGAAGGAAGTGGTTGTGGATGATGGGTTTTACTTGGTG
CTTAGTGGTGGCAATGGGAGCGGTGACGAGGGATTGAAAGTGGAAAGAGGGTTGAACTTG
AAGGAAATGGGAGTCGAAATGAGCTTGGGAATGGTGCTTTTGGTAGTTAGGCCACCAAGA
TGGGAAGATGAAGATCAACAAATTGATGAAGATTAG

Peptide Sequence

PEP ID

Solyc11g006060.1.1
PEP Infomation

Rubisco accumulation factor 1.1, chloroplastic (AHRD V3.3 *** RAF1_ARATH)
Sequence

MFSLTVNSPKSLSLSTPFLPSHPHPIPTITHKPNLSPRPISALIIPPSGQRNQQYSTAPP
QQQQLYQPFRPPPSPLPPKFRNLDTNSKLEVLANRLGLWYEYAPLIPSLTSEGFTPSTLE
EITGITGVEQNRLVVAAQVRETLVECGLDEETLSFFESGGAELLYEIRLLSGKQRTDAAS
FIVRNGFDMKQAQDLARSMKDFPRRRIDYGWDKFTGDSPGDCLAFWFFRLAQEHAAAAAE
DSRVEAMEKALEVVETESARNVLVEVLEGKGVDKESVIDEQVKVPLVRMKLGEVAESTKV
VVLPVCKAEKREFEVEAAPWECGGVGEFGVVEAEKDWRRWVVLPGWQPIAGLERGGVAVS
FKNGKLLPWKEKRKYKEEPVLVVADRGRKEVVVDDGFYLVLSGGNGSGDEGLKVERGLNL
KEMGVEMSLGMVLLVVRPPRWEDEDQQIDED*

Transcript Sequence

Transcript ID

Solyc11g006060.1.1
Transcript Infomation

Rubisco accumulation factor 1.1, chloroplastic (AHRD V3.3 *** RAF1_ARATH)
Sequence

ATGTTTTCTCTCACTGTAAACTCCCCTAAATCTTTATCTCTCTCAACCCCATTTCTCCCT
AGTCATCCCCACCCCATCCCCACCATAACCCACAAACCAAATCTCAGTCCAAGACCCATA
TCAGCACTTATCATCCCTCCTTCAGGTCAAAGAAACCAACAATATTCAACAGCACCACCA
CAACAACAGCAGCTTTATCAGCCATTTAGACCACCCCCTTCTCCTCTTCCACCGAAATTT
CGCAATCTTGACACCAATTCCAAGCTCGAAGTTCTCGCTAATCGTCTTGGACTTTGGTAT
GAATATGCCCCTTTGATACCTTCGTTAACCAGTGAAGGGTTTACGCCTTCTACACTCGAG
GAAATTACTGGGATTACTGGGGTTGAGCAGAATAGATTGGTGGTTGCTGCTCAAGTTCGT
GAAACTCTTGTTGAGTGTGGTTTGGATGAAGAAACGCTGTCGTTTTTTGAATCTGGGGGT
GCTGAATTGTTGTATGAAATTCGGTTGCTTAGTGGTAAGCAACGAACGGATGCTGCTAGT
TTTATAGTGAGGAATGGGTTTGATATGAAGCAAGCGCAGGATTTAGCTAGGTCAATGAAG
GATTTCCCGCGAAGACGAATCGATTATGGTTGGGACAAGTTTACTGGTGATTCTCCTGGT
GATTGTTTGGCTTTTTGGTTCTTTAGGCTAGCTCAAGAACATGCTGCTGCAGCTGCTGAG
GATTCGAGGGTTGAGGCAATGGAGAAGGCACTTGAAGTTGTGGAGACTGAAAGTGCTAGA
AATGTGCTTGTAGAGGTGTTAGAAGGAAAAGGGGTTGATAAAGAGAGTGTAATTGATGAG
CAGGTGAAAGTGCCTTTGGTGAGGATGAAGCTAGGGGAGGTAGCAGAGTCGACGAAAGTA
GTGGTTTTGCCTGTTTGCAAGGCGGAGAAGAGGGAGTTTGAGGTGGAGGCAGCGCCATGG
GAATGTGGTGGTGTGGGGGAGTTTGGTGTAGTGGAGGCAGAGAAGGATTGGAGGAGATGG
GTAGTTTTGCCTGGATGGCAACCAATTGCAGGATTAGAGAGAGGTGGAGTTGCAGTATCG
TTCAAGAATGGGAAGCTTTTGCCATGGAAGGAGAAGAGGAAGTACAAGGAAGAGCCAGTT
TTGGTAGTGGCTGATAGAGGAAGGAAGGAAGTGGTTGTGGATGATGGGTTTTACTTGGTG
CTTAGTGGTGGCAATGGGAGCGGTGACGAGGGATTGAAAGTGGAAAGAGGGTTGAACTTG
AAGGAAATGGGAGTCGAAATGAGCTTGGGAATGGTGCTTTTGGTAGTTAGGCCACCAAGA
TGGGAAGATGAAGATCAACAAATTGATGAAGATTAG